Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AL035079.1-201ENST00000405210 287 ntBASIC4.4□□□□□ -1.71
C11orf88Q6PI97 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.4□□□□□ -1.71
C11orf88Q6PI97 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.4□□□□□ -1.71
C11orf88Q6PI97 PAICSP7-201ENST00000419829 962 ntBASIC4.4□□□□□ -1.71
C11orf88Q6PI97 AL133325.1-201ENST00000421090 382 ntBASIC4.4□□□□□ -1.71
C11orf88Q6PI97 RPL7P57-201ENST00000423238 740 ntBASIC4.4□□□□□ -1.71
C11orf88Q6PI97 AL732292.1-201ENST00000426692 226 ntBASIC4.4□□□□□ -1.71
C11orf88Q6PI97 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.4□□□□□ -1.71
C11orf88Q6PI97 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.4□□□□□ -1.71
C11orf88Q6PI97 AC004980.3-201ENST00000447046 365 ntBASIC4.4□□□□□ -1.71
C11orf88Q6PI97 BTF3P6-201ENST00000448054 499 ntBASIC4.4□□□□□ -1.71
C11orf88Q6PI97 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.4□□□□□ -1.71
C11orf88Q6PI97 PPIAP3-201ENST00000450588 505 ntBASIC4.4□□□□□ -1.71
C11orf88Q6PI97 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.4□□□□□ -1.71
C11orf88Q6PI97 AC091180.1-201ENST00000462104 372 ntBASIC4.4□□□□□ -1.71
C11orf88Q6PI97 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.4□□□□□ -1.71
C11orf88Q6PI97 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.4□□□□□ -1.71
C11orf88Q6PI97 ARL4AP1-201ENST00000503220 705 ntBASIC4.4□□□□□ -1.71
C11orf88Q6PI97 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.4□□□□□ -1.71
C11orf88Q6PI97 AC024558.1-201ENST00000505008 528 ntBASIC4.4□□□□□ -1.71
C11orf88Q6PI97 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.4□□□□□ -1.71
C11orf88Q6PI97 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.4□□□□□ -1.71
C11orf88Q6PI97 AC093755.1-201ENST00000512950 1023 ntBASIC4.4□□□□□ -1.71
C11orf88Q6PI97 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.4□□□□□ -1.71
C11orf88Q6PI97 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.4□□□□□ -1.71
C11orf88Q6PI97 MIR4789-201ENST00000577469 82 ntBASIC4.4□□□□□ -1.71
C11orf88Q6PI97 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.4□□□□□ -1.71
C11orf88Q6PI97 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC4.4□□□□□ -1.71
C11orf88Q6PI97 AL118522.2-201ENST00000616045 615 ntBASIC4.4□□□□□ -1.71
C11orf88Q6PI97 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
C11orf88Q6PI97 C2orf27A-204ENST00000623058 969 ntBASIC4.4□□□□□ -1.71
C11orf88Q6PI97 AC006065.5-201ENST00000623427 349 ntBASIC4.4□□□□□ -1.71
C11orf88Q6PI97 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
C11orf88Q6PI97 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.4□□□□□ -1.71
C11orf88Q6PI97 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
C11orf88Q6PI97 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
C11orf88Q6PI97 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
C11orf88Q6PI97 SALL4P2-201ENST00000423288 2910 ntBASIC4.39□□□□□ -1.71
C11orf88Q6PI97 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
C11orf88Q6PI97 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
C11orf88Q6PI97 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.39□□□□□ -1.71
C11orf88Q6PI97 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
C11orf88Q6PI97 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
C11orf88Q6PI97 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
C11orf88Q6PI97 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
C11orf88Q6PI97 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
C11orf88Q6PI97 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.39□□□□□ -1.71
C11orf88Q6PI97 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
C11orf88Q6PI97 MIR3074-201ENST00000384885 81 ntBASIC4.39□□□□□ -1.71
C11orf88Q6PI97 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
C11orf88Q6PI97 RN7SKP278-201ENST00000410504 342 ntBASIC4.39□□□□□ -1.71
C11orf88Q6PI97 AC073264.1-201ENST00000411508 416 ntBASIC4.39□□□□□ -1.71
C11orf88Q6PI97 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
C11orf88Q6PI97 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.39□□□□□ -1.71
C11orf88Q6PI97 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
C11orf88Q6PI97 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.39□□□□□ -1.71
C11orf88Q6PI97 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.39□□□□□ -1.71
C11orf88Q6PI97 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.39□□□□□ -1.71
C11orf88Q6PI97 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.39□□□□□ -1.71
C11orf88Q6PI97 AC105399.1-202ENST00000447303 205 ntBASIC4.39□□□□□ -1.71
C11orf88Q6PI97 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.39□□□□□ -1.71
C11orf88Q6PI97 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
C11orf88Q6PI97 GTF2IP12-201ENST00000456547 356 ntBASIC4.39□□□□□ -1.71
C11orf88Q6PI97 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.39□□□□□ -1.71
C11orf88Q6PI97 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
C11orf88Q6PI97 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
C11orf88Q6PI97 RPS27P23-201ENST00000487608 251 ntBASIC4.39□□□□□ -1.71
C11orf88Q6PI97 RPS23P1-201ENST00000491662 432 ntBASIC4.39□□□□□ -1.71
C11orf88Q6PI97 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.39□□□□□ -1.71
C11orf88Q6PI97 HMGB1P44-201ENST00000508597 572 ntBASIC4.39□□□□□ -1.71
C11orf88Q6PI97 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.39□□□□□ -1.71
C11orf88Q6PI97 IGHV3-32-201ENST00000519182 355 ntBASIC4.39□□□□□ -1.71
C11orf88Q6PI97 IGJP1-201ENST00000522682 475 ntBASIC4.39□□□□□ -1.71
C11orf88Q6PI97 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.39□□□□□ -1.71
C11orf88Q6PI97 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.39□□□□□ -1.71
C11orf88Q6PI97 AC044860.2-201ENST00000561005 179 ntBASIC4.39□□□□□ -1.71
C11orf88Q6PI97 CYP2C60P-201ENST00000566088 139 ntBASIC4.39□□□□□ -1.71
C11orf88Q6PI97 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
C11orf88Q6PI97 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.39□□□□□ -1.71
C11orf88Q6PI97 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.39□□□□□ -1.71
C11orf88Q6PI97 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.39□□□□□ -1.71
C11orf88Q6PI97 AL353600.1-201ENST00000608148 251 ntBASIC4.39□□□□□ -1.71
C11orf88Q6PI97 AC021851.1-201ENST00000608537 1082 ntBASIC4.39□□□□□ -1.71
C11orf88Q6PI97 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.39□□□□□ -1.71
C11orf88Q6PI97 AL445528.2-201ENST00000620582 470 ntBASIC4.39□□□□□ -1.71
C11orf88Q6PI97 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
C11orf88Q6PI97 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.39□□□□□ -1.71
C11orf88Q6PI97 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.39□□□□□ -1.71
C11orf88Q6PI97 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
C11orf88Q6PI97 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
C11orf88Q6PI97 MTCO1P6-201ENST00000481192 1384 ntBASIC4.39□□□□□ -1.71
C11orf88Q6PI97 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
C11orf88Q6PI97 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
C11orf88Q6PI97 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
C11orf88Q6PI97 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.38□□□□□ -1.71
C11orf88Q6PI97 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
C11orf88Q6PI97 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
C11orf88Q6PI97 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
C11orf88Q6PI97 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
C11orf88Q6PI97 RNA5SP507-201ENST00000363603 121 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms