Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AL589880.1-201ENST00000448271 287 ntBASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 TRY2P-201ENST00000448860 689 ntBASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 CYCSP34-201ENST00000458172 304 ntBASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 AC091951.3-201ENST00000504093 246 ntBASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 AC034244.1-201ENST00000507687 207 ntBASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 RNU6-1129P-201ENST00000515964 104 ntBASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 FKBP1BP1-201ENST00000553366 325 ntBASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 NBR2-204ENST00000587322 63 ntBASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 MTND3P19-201ENST00000603825 345 ntBASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 AC013244.1-201ENST00000604279 193 ntBASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 AL121932.1-201ENST00000605542 214 ntBASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 AC018638.7-201ENST00000605836 1114 ntBASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 AC007349.4-201ENST00000608114 532 ntBASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 AP001521.2-201ENST00000608772 546 ntBASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 SDR42E1P1-201ENST00000611327 477 ntBASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 EIF3FP1-201ENST00000613970 806 ntBASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 RMST_10.1-201ENST00000616309 154 ntBASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 AC016769.4-201ENST00000616893 535 ntBASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 AP003497.2-201ENST00000624220 967 ntBASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 SOCS5P3-201ENST00000425115 1576 ntBASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 MTND4P4-201ENST00000439033 1366 ntBASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 AC112255.1-201ENST00000624070 2493 ntBASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 ZNF736P9Y-201ENST00000439586 1345 ntBASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 RNU6-1251P-201ENST00000364502 107 ntBASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 RNU4-24P-201ENST00000364565 139 ntBASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 AL136310.1-201ENST00000404926 654 ntBASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 ATF1P1-201ENST00000406040 927 ntBASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 RN7SKP125-201ENST00000410481 302 ntBASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 SEPT2P1-201ENST00000419651 180 ntBASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 EIF4A1P1-201ENST00000420241 934 ntBASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 USP9YP26-201ENST00000421008 661 ntBASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 PNRC2P1-201ENST00000423940 420 ntBASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 RBMY2QP-201ENST00000429799 1147 ntBASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 AC005345.1-201ENST00000431868 217 ntBASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 RPS17P8-201ENST00000434525 335 ntBASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 AL451139.1-201ENST00000434718 346 ntBASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 UBE2D3P1-201ENST00000436669 444 ntBASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 PSMD10P3-201ENST00000437000 448 ntBASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 AC004938.1-201ENST00000438468 308 ntBASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 AL445567.1-201ENST00000439121 144 ntBASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 RPS27P5-201ENST00000444247 244 ntBASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 RPS6P2-201ENST00000454208 705 ntBASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 RPS27AP16-201ENST00000492222 470 ntBASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 AC008638.1-201ENST00000506035 866 ntBASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 MTCYBP16-201ENST00000509187 1129 ntBASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 BTF3P13-201ENST00000513224 490 ntBASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 SNORA3.4-201ENST00000515969 96 ntBASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 AP003717.3-201ENST00000544832 1180 ntBASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 AC125612.1-201ENST00000547580 377 ntBASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.77□□□□□ -1.65
ZNF549Q6P9A3 AP001094.1-201ENST00000579805 193 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms