Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LYSMD4Q5XG99 AC104118.1-201ENST00000607625 1589 ntBASIC4.56□□□□□ -1.68
LYSMD4Q5XG99 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LYSMD4Q5XG99 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.56□□□□□ -1.68
LYSMD4Q5XG99 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
LYSMD4Q5XG99 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 IQCB2P-201ENST00000401788 1633 ntBASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 SNORA63.3-201ENST00000362682 132 ntBASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 RNU6-304P-201ENST00000364855 107 ntBASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 GCNT6-201ENST00000379591 934 ntBASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 MIR23A-201ENST00000385245 73 ntBASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 MIR134-201ENST00000385258 73 ntBASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 VDAC2P1-201ENST00000399358 958 ntBASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 AL445189.1-201ENST00000405722 338 ntBASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 RPL23AP26-201ENST00000412728 464 ntBASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 RPL6P29-201ENST00000414863 865 ntBASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 GNG5P5-201ENST00000420444 220 ntBASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 RPS3AP54-201ENST00000435535 734 ntBASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 ELOCP10-201ENST00000440624 327 ntBASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 AL359073.1-201ENST00000448036 403 ntBASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 AL591623.2-201ENST00000449978 222 ntBASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 RN7SL98P-201ENST00000462271 300 ntBASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 AC105137.1-201ENST00000484355 562 ntBASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 AC073073.1-201ENST00000493920 463 ntBASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 CAB39P1-201ENST00000502277 460 ntBASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 AC010374.2-201ENST00000512933 535 ntBASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 RNU6-347P-201ENST00000516658 105 ntBASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 RNU6-334P-201ENST00000517072 102 ntBASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 AC107918.3-201ENST00000533272 382 ntBASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 AC027216.1-201ENST00000577726 685 ntBASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 MTATP6P2-201ENST00000603319 678 ntBASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 ELOCP34-201ENST00000604436 327 ntBASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 AC026790.2-201ENST00000606282 430 ntBASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 MIR92B-201ENST00000607575 96 ntBASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 LINC01808-202ENST00000641680 1116 ntBASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 MTCO1P4-201ENST00000520516 1409 ntBASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
LYSMD4Q5XG99 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
LYSMD4Q5XG99 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
LYSMD4Q5XG99 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.54□□□□□ -1.68
LYSMD4Q5XG99 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
LYSMD4Q5XG99 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
LYSMD4Q5XG99 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LYSMD4Q5XG99 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
LYSMD4Q5XG99 MIR142-201ENST00000384835 87 ntBASIC4.54□□□□□ -1.68
LYSMD4Q5XG99 ATP5F1P2-201ENST00000398143 760 ntBASIC4.54□□□□□ -1.68
LYSMD4Q5XG99 HMGB1P13-201ENST00000406019 642 ntBASIC4.54□□□□□ -1.68
LYSMD4Q5XG99 VN1R37P-201ENST00000419096 748 ntBASIC4.54□□□□□ -1.68
LYSMD4Q5XG99 MTCO3P4-201ENST00000419236 787 ntBASIC4.54□□□□□ -1.68
LYSMD4Q5XG99 AL590609.2-201ENST00000421430 368 ntBASIC4.54□□□□□ -1.68
LYSMD4Q5XG99 AC099336.2-201ENST00000422457 254 ntBASIC4.54□□□□□ -1.68
LYSMD4Q5XG99 PNRC2P1-201ENST00000423940 420 ntBASIC4.54□□□□□ -1.68
LYSMD4Q5XG99 BMS1P19-201ENST00000433925 393 ntBASIC4.54□□□□□ -1.68
LYSMD4Q5XG99 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.54□□□□□ -1.68
LYSMD4Q5XG99 GXYLT1P1-201ENST00000446657 490 ntBASIC4.54□□□□□ -1.68
LYSMD4Q5XG99 HMGN1P5-201ENST00000448591 263 ntBASIC4.54□□□□□ -1.68
LYSMD4Q5XG99 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LYSMD4Q5XG99 AC099560.2-201ENST00000457554 255 ntBASIC4.54□□□□□ -1.68
LYSMD4Q5XG99 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.54□□□□□ -1.68
LYSMD4Q5XG99 PARP4P3-201ENST00000510265 317 ntBASIC4.54□□□□□ -1.68
LYSMD4Q5XG99 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.54□□□□□ -1.68
LYSMD4Q5XG99 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.54□□□□□ -1.68
LYSMD4Q5XG99 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.54□□□□□ -1.68
LYSMD4Q5XG99 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.54□□□□□ -1.68
LYSMD4Q5XG99 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms