Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC7.72□□□□□ -1.17
RC3H1Q5TC82 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC7.72□□□□□ -1.17
RC3H1Q5TC82 RN7SL57P-201ENST00000493687 290 ntBASIC7.72□□□□□ -1.17
RC3H1Q5TC82 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC7.72□□□□□ -1.17
RC3H1Q5TC82 AC138866.2-201ENST00000508650 584 ntBASIC7.72□□□□□ -1.17
RC3H1Q5TC82 AC104136.1-201ENST00000512969 394 ntBASIC7.72□□□□□ -1.17
RC3H1Q5TC82 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC7.72□□□□□ -1.17
RC3H1Q5TC82 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
RC3H1Q5TC82 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC7.72□□□□□ -1.17
RC3H1Q5TC82 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC7.72□□□□□ -1.17
RC3H1Q5TC82 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC7.72□□□□□ -1.17
RC3H1Q5TC82 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC7.72□□□□□ -1.17
RC3H1Q5TC82 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC7.72□□□□□ -1.17
RC3H1Q5TC82 AC233702.7-202ENST00000582941 211 ntBASIC7.72□□□□□ -1.17
RC3H1Q5TC82 AC245014.2-201ENST00000603689 287 ntBASIC7.72□□□□□ -1.17
RC3H1Q5TC82 AL391646.1-201ENST00000603860 190 ntBASIC7.72□□□□□ -1.17
RC3H1Q5TC82 AC246785.4-201ENST00000605374 287 ntBASIC7.72□□□□□ -1.17
RC3H1Q5TC82 AL365434.2-201ENST00000607979 234 ntBASIC7.72□□□□□ -1.17
RC3H1Q5TC82 AC087588.2-201ENST00000617667 426 ntBASIC7.72□□□□□ -1.17
RC3H1Q5TC82 AC091905.1-201ENST00000624400 311 ntBASIC7.72□□□□□ -1.17
RC3H1Q5TC82 AC110994.2-201ENST00000635481 492 ntBASIC7.72□□□□□ -1.17
RC3H1Q5TC82 AC025809.2-201ENST00000625085 1802 ntBASIC7.72□□□□□ -1.17
RC3H1Q5TC82 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
RC3H1Q5TC82 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC7.72□□□□□ -1.17
RC3H1Q5TC82 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
RC3H1Q5TC82 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RC3H1Q5TC82 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RC3H1Q5TC82 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RC3H1Q5TC82 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
RC3H1Q5TC82 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RC3H1Q5TC82 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
RC3H1Q5TC82 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RC3H1Q5TC82 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RC3H1Q5TC82 CASC19-243ENST00000641588 1546 ntBASIC7.72□□□□□ -1.17
RC3H1Q5TC82 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RC3H1Q5TC82 CR1-204ENST00000367052 7469 ntTSL 5 BASIC7.72□□□□□ -1.17
RC3H1Q5TC82 CR1-205ENST00000367053 7469 ntTSL 5 BASIC7.72□□□□□ -1.17
RC3H1Q5TC82 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
RC3H1Q5TC82 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
RC3H1Q5TC82 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC7.71□□□□□ -1.17
RC3H1Q5TC82 AL161901.1-201ENST00000624954 3425 ntBASIC7.71□□□□□ -1.17
RC3H1Q5TC82 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.17
RC3H1Q5TC82 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
RC3H1Q5TC82 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
RC3H1Q5TC82 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.18
RC3H1Q5TC82 Y_RNA.97-201ENST00000363094 102 ntBASIC7.71□□□□□ -1.18
RC3H1Q5TC82 RNA5SP394-201ENST00000364216 119 ntBASIC7.71□□□□□ -1.18
RC3H1Q5TC82 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC7.71□□□□□ -1.18
RC3H1Q5TC82 RNU6-723P-201ENST00000383973 107 ntBASIC7.71□□□□□ -1.18
RC3H1Q5TC82 RNU6-639P-201ENST00000384074 107 ntBASIC7.71□□□□□ -1.18
RC3H1Q5TC82 MIR433-201ENST00000384837 93 ntBASIC7.71□□□□□ -1.18
RC3H1Q5TC82 Y_RNA.579-201ENST00000390939 94 ntBASIC7.71□□□□□ -1.18
RC3H1Q5TC82 EI24P3-201ENST00000399046 1062 ntBASIC7.71□□□□□ -1.18
RC3H1Q5TC82 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC7.71□□□□□ -1.18
RC3H1Q5TC82 UBE2V1P14-201ENST00000415815 558 ntBASIC7.71□□□□□ -1.18
RC3H1Q5TC82 AC009161.1-201ENST00000417306 376 ntBASIC7.71□□□□□ -1.18
RC3H1Q5TC82 CYP4F30P-202ENST00000420048 405 ntBASIC7.71□□□□□ -1.18
RC3H1Q5TC82 PIGFP2-201ENST00000421400 651 ntBASIC7.71□□□□□ -1.18
RC3H1Q5TC82 MTCO2P5-201ENST00000422621 426 ntBASIC7.71□□□□□ -1.18
RC3H1Q5TC82 FTH1P10-202ENST00000430907 550 ntBASIC7.71□□□□□ -1.18
RC3H1Q5TC82 AC009961.2-201ENST00000435771 251 ntBASIC7.71□□□□□ -1.18
RC3H1Q5TC82 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC7.71□□□□□ -1.18
RC3H1Q5TC82 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC7.71□□□□□ -1.18
RC3H1Q5TC82 AC023512.1-201ENST00000444513 499 ntBASIC7.71□□□□□ -1.18
RC3H1Q5TC82 CBWD4P-201ENST00000445695 655 ntBASIC7.71□□□□□ -1.18
RC3H1Q5TC82 RNU6-420P-201ENST00000458780 107 ntBASIC7.71□□□□□ -1.18
RC3H1Q5TC82 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC7.71□□□□□ -1.18
RC3H1Q5TC82 AC108064.1-201ENST00000513791 460 ntBASIC7.71□□□□□ -1.18
RC3H1Q5TC82 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC7.71□□□□□ -1.18
RC3H1Q5TC82 IGLV2-28-201ENST00000520681 304 ntBASIC7.71□□□□□ -1.18
RC3H1Q5TC82 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC7.71□□□□□ -1.18
RC3H1Q5TC82 AC073916.1-201ENST00000545095 130 ntBASIC7.71□□□□□ -1.18
RC3H1Q5TC82 AC010653.1-201ENST00000571108 881 ntBASIC7.71□□□□□ -1.18
RC3H1Q5TC82 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC7.71□□□□□ -1.18
RC3H1Q5TC82 LAPTM4BP2-201ENST00000604542 446 ntBASIC7.71□□□□□ -1.18
RC3H1Q5TC82 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC7.71□□□□□ -1.18
RC3H1Q5TC82 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC7.71□□□□□ -1.18
RC3H1Q5TC82 MIR6730-201ENST00000622213 67 ntBASIC7.71□□□□□ -1.18
RC3H1Q5TC82 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC7.71□□□□□ -1.18
RC3H1Q5TC82 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC7.71□□□□□ -1.18
RC3H1Q5TC82 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
RC3H1Q5TC82 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
RC3H1Q5TC82 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
RC3H1Q5TC82 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
RC3H1Q5TC82 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
RC3H1Q5TC82 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
RC3H1Q5TC82 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
RC3H1Q5TC82 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC7.71□□□□□ -1.18
RC3H1Q5TC82 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.18
RC3H1Q5TC82 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
RC3H1Q5TC82 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
RC3H1Q5TC82 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.7□□□□□ -1.18
RC3H1Q5TC82 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC7.7□□□□□ -1.18
RC3H1Q5TC82 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
RC3H1Q5TC82 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
RC3H1Q5TC82 AC024587.1-201ENST00000505925 2157 ntBASIC7.7□□□□□ -1.18
RC3H1Q5TC82 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
RC3H1Q5TC82 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
RC3H1Q5TC82 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC7.7□□□□□ -1.18
RC3H1Q5TC82 MIR369-201ENST00000362155 70 ntBASIC7.7□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms