Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC144BQ3MJ40 AC092376.2-201ENST00000622621 4116 ntBASIC6.31□□□□□ -1.4
CCDC144BQ3MJ40 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
CCDC144BQ3MJ40 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC144BQ3MJ40 TEK-205ENST00000615002 4666 ntTSL 5 BASIC6.31□□□□□ -1.4
CCDC144BQ3MJ40 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.31□□□□□ -1.4
CCDC144BQ3MJ40 SLC2A3P1-201ENST00000519666 1451 ntBASIC6.31□□□□□ -1.4
CCDC144BQ3MJ40 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC6.31□□□□□ -1.4
CCDC144BQ3MJ40 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.31□□□□□ -1.4
CCDC144BQ3MJ40 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC144BQ3MJ40 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC144BQ3MJ40 RNA5SP335-201ENST00000363817 110 ntBASIC6.31□□□□□ -1.4
CCDC144BQ3MJ40 RN7SKP6-201ENST00000364795 319 ntBASIC6.31□□□□□ -1.4
CCDC144BQ3MJ40 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC144BQ3MJ40 RNU6-444P-201ENST00000383988 108 ntBASIC6.31□□□□□ -1.4
CCDC144BQ3MJ40 ATP5F1P3-201ENST00000397213 657 ntBASIC6.31□□□□□ -1.4
CCDC144BQ3MJ40 TRAPPC2P10-201ENST00000415662 323 ntBASIC6.31□□□□□ -1.4
CCDC144BQ3MJ40 AC009518.2-201ENST00000418056 731 ntBASIC6.31□□□□□ -1.4
CCDC144BQ3MJ40 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC6.31□□□□□ -1.4
CCDC144BQ3MJ40 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.31□□□□□ -1.4
CCDC144BQ3MJ40 AC005033.1-201ENST00000428904 813 ntBASIC6.31□□□□□ -1.4
CCDC144BQ3MJ40 RPL31P54-201ENST00000429803 370 ntBASIC6.31□□□□□ -1.4
CCDC144BQ3MJ40 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.31□□□□□ -1.4
CCDC144BQ3MJ40 RPL12P3-201ENST00000440080 396 ntBASIC6.31□□□□□ -1.4
CCDC144BQ3MJ40 AC108463.1-201ENST00000450258 347 ntBASIC6.31□□□□□ -1.4
CCDC144BQ3MJ40 SETP14-201ENST00000497538 873 ntBASIC6.31□□□□□ -1.4
CCDC144BQ3MJ40 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.31□□□□□ -1.4
CCDC144BQ3MJ40 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC6.31□□□□□ -1.4
CCDC144BQ3MJ40 RNU6-202P-201ENST00000515998 96 ntBASIC6.31□□□□□ -1.4
CCDC144BQ3MJ40 RNU6-1261P-201ENST00000517194 104 ntBASIC6.31□□□□□ -1.4
CCDC144BQ3MJ40 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC6.31□□□□□ -1.4
CCDC144BQ3MJ40 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.31□□□□□ -1.4
CCDC144BQ3MJ40 AL359219.2-201ENST00000555184 348 ntBASIC6.31□□□□□ -1.4
CCDC144BQ3MJ40 AC090515.3-201ENST00000560431 315 ntBASIC6.31□□□□□ -1.4
CCDC144BQ3MJ40 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC6.31□□□□□ -1.4
CCDC144BQ3MJ40 DUXAP11-201ENST00000603858 526 ntBASIC6.31□□□□□ -1.4
CCDC144BQ3MJ40 AC093783.1-201ENST00000612976 329 ntBASIC6.31□□□□□ -1.4
CCDC144BQ3MJ40 AC090510.2-201ENST00000617465 629 ntBASIC6.31□□□□□ -1.4
CCDC144BQ3MJ40 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC144BQ3MJ40 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC6.31□□□□□ -1.4
CCDC144BQ3MJ40 AC068870.2-201ENST00000620635 389 ntBASIC6.31□□□□□ -1.4
CCDC144BQ3MJ40 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC144BQ3MJ40 AL353796.1-201ENST00000561542 3241 ntBASIC6.31□□□□□ -1.4
CCDC144BQ3MJ40 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC144BQ3MJ40 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC144BQ3MJ40 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CCDC144BQ3MJ40 DNM1P47-203ENST00000571780 12667 ntBASIC6.31□□□□□ -1.4
CCDC144BQ3MJ40 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 AC016716.1-201ENST00000265882 708 ntBASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 OR56B2P-201ENST00000317102 954 ntBASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 RPL23P2-201ENST00000320371 421 ntBASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 U8.4-201ENST00000363626 134 ntBASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 RNU6-931P-201ENST00000363850 107 ntBASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 U3.28-201ENST00000391249 210 ntBASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 MTCO3P31-201ENST00000405526 789 ntBASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 RPL31P52-201ENST00000407532 367 ntBASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 AC008280.1-201ENST00000418851 412 ntBASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 IPMKP1-201ENST00000425988 855 ntBASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 VN1R21P-201ENST00000426703 765 ntBASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 B3GNT2P1-201ENST00000434960 952 ntBASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 LINC02210-201ENST00000444561 288 ntBASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 MTCO3P11-201ENST00000455103 774 ntBASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 SNORD125-201ENST00000459538 96 ntBASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 MTND6P6-201ENST00000478031 263 ntBASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 RPL7P41-201ENST00000485823 957 ntBASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 AC021146.8-201ENST00000507455 733 ntBASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 RFPL4AP5-201ENST00000514977 504 ntBASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 HNRNPKP5-201ENST00000515300 253 ntBASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 BLZF2P-201ENST00000553776 1130 ntBASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 AC116553.2-201ENST00000564203 463 ntBASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 AC018552.3-201ENST00000567416 561 ntBASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 ISCA1P3-201ENST00000577104 373 ntBASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 MIR4311-201ENST00000580794 100 ntBASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 RN7SL708P-201ENST00000580952 299 ntBASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 MIR4660-201ENST00000583549 74 ntBASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 AC006539.2-201ENST00000601729 572 ntBASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 AC121247.2-201ENST00000604776 136 ntBASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 AC097505.1-201ENST00000610199 565 ntBASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 Z95327.3-201ENST00000610385 572 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms