Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RFX4Q33E94 DEFB109D-201ENST00000529497 240 ntBASIC3.99□□□□□ -1.77
RFX4Q33E94 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
RFX4Q33E94 AP006289.1-201ENST00000538089 277 ntBASIC3.99□□□□□ -1.77
RFX4Q33E94 AC020914.4-201ENST00000597690 277 ntBASIC3.99□□□□□ -1.77
RFX4Q33E94 AC025946.2-201ENST00000603398 234 ntBASIC3.99□□□□□ -1.77
RFX4Q33E94 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RFX4Q33E94 AP003392.5-201ENST00000607857 415 ntBASIC3.99□□□□□ -1.77
RFX4Q33E94 MIR6891-201ENST00000618788 93 ntBASIC3.99□□□□□ -1.77
RFX4Q33E94 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
RFX4Q33E94 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
RFX4Q33E94 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RFX4Q33E94 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.99□□□□□ -1.77
RFX4Q33E94 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RFX4Q33E94 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
RFX4Q33E94 CNOT6LP1-201ENST00000559681 1462 ntBASIC3.98□□□□□ -1.77
RFX4Q33E94 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.98□□□□□ -1.77
RFX4Q33E94 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
RFX4Q33E94 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
RFX4Q33E94 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.98□□□□□ -1.77
RFX4Q33E94 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
RFX4Q33E94 AC010300.1-201ENST00000600671 5134 ntBASIC3.98□□□□□ -1.77
RFX4Q33E94 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
RFX4Q33E94 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RFX4Q33E94 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RFX4Q33E94 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RFX4Q33E94 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC3.98□□□□□ -1.77
RFX4Q33E94 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RFX4Q33E94 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RFX4Q33E94 RNU6-819P-201ENST00000364116 107 ntBASIC3.98□□□□□ -1.77
RFX4Q33E94 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
RFX4Q33E94 MIR659-201ENST00000384963 97 ntBASIC3.98□□□□□ -1.77
RFX4Q33E94 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC3.98□□□□□ -1.77
RFX4Q33E94 AC019050.1-201ENST00000418508 492 ntBASIC3.98□□□□□ -1.77
RFX4Q33E94 MTCO1P45-201ENST00000431457 267 ntBASIC3.98□□□□□ -1.77
RFX4Q33E94 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.98□□□□□ -1.77
RFX4Q33E94 RPL12P3-201ENST00000440080 396 ntBASIC3.98□□□□□ -1.77
RFX4Q33E94 AL356535.1-201ENST00000440335 398 ntBASIC3.98□□□□□ -1.77
RFX4Q33E94 TXNP2-201ENST00000443918 295 ntBASIC3.98□□□□□ -1.77
RFX4Q33E94 YWHAQP9-201ENST00000445891 512 ntBASIC3.98□□□□□ -1.77
RFX4Q33E94 CCRL1P1-201ENST00000449542 1053 ntBASIC3.98□□□□□ -1.77
RFX4Q33E94 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.98□□□□□ -1.77
RFX4Q33E94 LARP7P4-201ENST00000481075 878 ntBASIC3.98□□□□□ -1.77
RFX4Q33E94 AC104164.2-201ENST00000496953 495 ntBASIC3.98□□□□□ -1.77
RFX4Q33E94 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.98□□□□□ -1.77
RFX4Q33E94 AC018797.3-201ENST00000513388 1241 ntBASIC3.98□□□□□ -1.77
RFX4Q33E94 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC3.98□□□□□ -1.77
RFX4Q33E94 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC3.98□□□□□ -1.77
RFX4Q33E94 IGKV1-32-201ENST00000519290 311 ntBASIC3.98□□□□□ -1.77
RFX4Q33E94 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.98□□□□□ -1.77
RFX4Q33E94 AP000827.1-201ENST00000527814 258 ntBASIC3.98□□□□□ -1.77
RFX4Q33E94 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RFX4Q33E94 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.98□□□□□ -1.77
RFX4Q33E94 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC3.98□□□□□ -1.77
RFX4Q33E94 MIR4436B2-201ENST00000581415 91 ntBASIC3.98□□□□□ -1.77
RFX4Q33E94 MIR4436B1-201ENST00000583272 91 ntBASIC3.98□□□□□ -1.77
RFX4Q33E94 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC3.98□□□□□ -1.77
RFX4Q33E94 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC3.98□□□□□ -1.77
RFX4Q33E94 AC022387.2-201ENST00000604050 448 ntBASIC3.98□□□□□ -1.77
RFX4Q33E94 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.98□□□□□ -1.77
RFX4Q33E94 AC128687.2-201ENST00000609657 566 ntBASIC3.98□□□□□ -1.77
RFX4Q33E94 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RFX4Q33E94 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.98□□□□□ -1.77
RFX4Q33E94 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.98□□□□□ -1.77
RFX4Q33E94 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RFX4Q33E94 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RFX4Q33E94 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.98□□□□□ -1.77
RFX4Q33E94 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
RFX4Q33E94 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RFX4Q33E94 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RFX4Q33E94 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
RFX4Q33E94 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.98□□□□□ -1.77
RFX4Q33E94 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RFX4Q33E94 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
RFX4Q33E94 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RFX4Q33E94 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RFX4Q33E94 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.97□□□□□ -1.77
RFX4Q33E94 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
RFX4Q33E94 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RFX4Q33E94 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
RFX4Q33E94 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
RFX4Q33E94 BDP1P-201ENST00000582658 1990 ntBASIC3.97□□□□□ -1.77
RFX4Q33E94 AC110792.3-201ENST00000595906 1614 ntBASIC3.97□□□□□ -1.77
RFX4Q33E94 AC083799.1-201ENST00000366451 910 ntBASIC3.97□□□□□ -1.77
RFX4Q33E94 RNU6-152P-201ENST00000384037 107 ntBASIC3.97□□□□□ -1.77
RFX4Q33E94 RNU1-89P-201ENST00000384592 164 ntBASIC3.97□□□□□ -1.77
RFX4Q33E94 MIR1179-201ENST00000408703 91 ntBASIC3.97□□□□□ -1.77
RFX4Q33E94 AP000357.1-201ENST00000409926 1165 ntBASIC3.97□□□□□ -1.77
RFX4Q33E94 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RFX4Q33E94 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC3.97□□□□□ -1.77
RFX4Q33E94 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC3.97□□□□□ -1.77
RFX4Q33E94 ATP5HP2-201ENST00000433885 485 ntBASIC3.97□□□□□ -1.77
RFX4Q33E94 LYPLA1P1-201ENST00000434514 622 ntBASIC3.97□□□□□ -1.77
RFX4Q33E94 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC3.97□□□□□ -1.77
RFX4Q33E94 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC3.97□□□□□ -1.77
RFX4Q33E94 RPL31P20-201ENST00000449593 360 ntBASIC3.97□□□□□ -1.77
RFX4Q33E94 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.97□□□□□ -1.77
RFX4Q33E94 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.97□□□□□ -1.77
RFX4Q33E94 AC092324.1-201ENST00000468671 324 ntBASIC3.97□□□□□ -1.77
RFX4Q33E94 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms