Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.35□□□□□ -1.71
SCN1BQ07699 RPL23AP65-201ENST00000475608 468 ntBASIC4.35□□□□□ -1.71
SCN1BQ07699 SIAH1P1-201ENST00000479411 923 ntBASIC4.35□□□□□ -1.71
SCN1BQ07699 RPL7P39-201ENST00000481157 744 ntBASIC4.35□□□□□ -1.71
SCN1BQ07699 RPS4XP1-201ENST00000482189 787 ntBASIC4.35□□□□□ -1.71
SCN1BQ07699 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.35□□□□□ -1.71
SCN1BQ07699 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.35□□□□□ -1.71
SCN1BQ07699 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SCN1BQ07699 RPS4XP20-201ENST00000505751 772 ntBASIC4.35□□□□□ -1.71
SCN1BQ07699 KRT19P6-201ENST00000510983 209 ntBASIC4.35□□□□□ -1.71
SCN1BQ07699 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.35□□□□□ -1.71
SCN1BQ07699 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.35□□□□□ -1.71
SCN1BQ07699 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SCN1BQ07699 AC126177.5-201ENST00000549599 178 ntBASIC4.35□□□□□ -1.71
SCN1BQ07699 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
SCN1BQ07699 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.35□□□□□ -1.71
SCN1BQ07699 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.35□□□□□ -1.71
SCN1BQ07699 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.35□□□□□ -1.71
SCN1BQ07699 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.35□□□□□ -1.71
SCN1BQ07699 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.35□□□□□ -1.71
SCN1BQ07699 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
SCN1BQ07699 AC069307.1-201ENST00000602820 447 ntBASIC4.35□□□□□ -1.71
SCN1BQ07699 AC115621.1-201ENST00000604653 858 ntBASIC4.35□□□□□ -1.71
SCN1BQ07699 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.35□□□□□ -1.71
SCN1BQ07699 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.35□□□□□ -1.71
SCN1BQ07699 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.35□□□□□ -1.71
SCN1BQ07699 LINC00901.1-201ENST00000617252 152 ntBASIC4.35□□□□□ -1.71
SCN1BQ07699 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.35□□□□□ -1.71
SCN1BQ07699 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.35□□□□□ -1.71
SCN1BQ07699 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SCN1BQ07699 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SCN1BQ07699 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SCN1BQ07699 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
SCN1BQ07699 AC107081.3-201ENST00000612715 2034 ntBASIC4.34□□□□□ -1.71
SCN1BQ07699 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
SCN1BQ07699 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SCN1BQ07699 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.34□□□□□ -1.71
SCN1BQ07699 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SCN1BQ07699 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.34□□□□□ -1.71
SCN1BQ07699 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SCN1BQ07699 ATP5F1P2-201ENST00000398143 760 ntBASIC4.34□□□□□ -1.71
SCN1BQ07699 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC4.34□□□□□ -1.71
SCN1BQ07699 AP000534.2-201ENST00000412729 568 ntBASIC4.34□□□□□ -1.71
SCN1BQ07699 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.34□□□□□ -1.71
SCN1BQ07699 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.34□□□□□ -1.71
SCN1BQ07699 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.34□□□□□ -1.71
SCN1BQ07699 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.34□□□□□ -1.71
SCN1BQ07699 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.34□□□□□ -1.71
SCN1BQ07699 AC079807.1-201ENST00000429993 481 ntBASIC4.34□□□□□ -1.71
SCN1BQ07699 AC092162.1-201ENST00000432828 434 ntBASIC4.34□□□□□ -1.71
SCN1BQ07699 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.34□□□□□ -1.71
SCN1BQ07699 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.34□□□□□ -1.71
SCN1BQ07699 AC069285.2-201ENST00000440210 275 ntBASIC4.34□□□□□ -1.71
SCN1BQ07699 AC002542.1-201ENST00000440683 193 ntBASIC4.34□□□□□ -1.71
SCN1BQ07699 RAB11AP1-201ENST00000442978 646 ntBASIC4.34□□□□□ -1.71
SCN1BQ07699 RPS26P41-201ENST00000450370 284 ntBASIC4.34□□□□□ -1.71
SCN1BQ07699 CEACAMP6-201ENST00000452007 574 ntBASIC4.34□□□□□ -1.71
SCN1BQ07699 CDC42P1-201ENST00000456658 548 ntBASIC4.34□□□□□ -1.71
SCN1BQ07699 RN7SL517P-201ENST00000462240 305 ntBASIC4.34□□□□□ -1.71
SCN1BQ07699 RN7SL443P-201ENST00000464331 290 ntBASIC4.34□□□□□ -1.71
SCN1BQ07699 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.34□□□□□ -1.71
SCN1BQ07699 RPS17P11-201ENST00000474297 293 ntBASIC4.34□□□□□ -1.71
SCN1BQ07699 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.34□□□□□ -1.71
SCN1BQ07699 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.34□□□□□ -1.71
SCN1BQ07699 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.34□□□□□ -1.71
SCN1BQ07699 AL136038.1-201ENST00000497246 351 ntBASIC4.34□□□□□ -1.71
SCN1BQ07699 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.34□□□□□ -1.71
SCN1BQ07699 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.34□□□□□ -1.71
SCN1BQ07699 BX510359.5-201ENST00000515651 304 ntBASIC4.34□□□□□ -1.71
SCN1BQ07699 RNA5SP362-201ENST00000516048 118 ntBASIC4.34□□□□□ -1.71
SCN1BQ07699 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.34□□□□□ -1.71
SCN1BQ07699 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.34□□□□□ -1.71
SCN1BQ07699 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
SCN1BQ07699 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SCN1BQ07699 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.34□□□□□ -1.71
SCN1BQ07699 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.34□□□□□ -1.71
SCN1BQ07699 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SCN1BQ07699 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.34□□□□□ -1.71
SCN1BQ07699 AC074029.1-201ENST00000552531 1044 ntBASIC4.34□□□□□ -1.71
SCN1BQ07699 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.34□□□□□ -1.71
SCN1BQ07699 NIFKP8-201ENST00000560500 874 ntBASIC4.34□□□□□ -1.71
SCN1BQ07699 EIF5A2P1-201ENST00000564027 460 ntBASIC4.34□□□□□ -1.71
SCN1BQ07699 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.34□□□□□ -1.71
SCN1BQ07699 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
SCN1BQ07699 AC017100.2-201ENST00000584628 355 ntBASIC4.34□□□□□ -1.71
SCN1BQ07699 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.34□□□□□ -1.71
SCN1BQ07699 SLC25A36P1-201ENST00000590111 465 ntBASIC4.34□□□□□ -1.71
SCN1BQ07699 AC133794.1-201ENST00000602731 914 ntBASIC4.34□□□□□ -1.71
SCN1BQ07699 COX6CP4-201ENST00000605798 228 ntBASIC4.34□□□□□ -1.71
SCN1BQ07699 AC008759.3-201ENST00000613300 508 ntBASIC4.34□□□□□ -1.71
SCN1BQ07699 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.34□□□□□ -1.71
SCN1BQ07699 AL049767.1-202ENST00000637826 242 ntBASIC4.34□□□□□ -1.71
SCN1BQ07699 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
SCN1BQ07699 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SCN1BQ07699 AL136520.1-201ENST00000600311 1322 ntBASIC4.34□□□□□ -1.71
SCN1BQ07699 Z98755.1-201ENST00000407015 1384 ntBASIC4.34□□□□□ -1.71
SCN1BQ07699 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SCN1BQ07699 KPNA2P2-201ENST00000419546 1489 ntBASIC4.34□□□□□ -1.71
SCN1BQ07699 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SCN1BQ07699 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms