Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 AC079600.1-201ENST00000550326 297 ntBASIC6.35□□□□□ -1.39
SOX4Q06945 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.35□□□□□ -1.39
SOX4Q06945 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC6.35□□□□□ -1.39
SOX4Q06945 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC6.35□□□□□ -1.39
SOX4Q06945 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.35□□□□□ -1.39
SOX4Q06945 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC6.35□□□□□ -1.39
SOX4Q06945 FAM27E4-201ENST00000605259 342 ntBASIC6.35□□□□□ -1.39
SOX4Q06945 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.35□□□□□ -1.39
SOX4Q06945 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC6.35□□□□□ -1.39
SOX4Q06945 AC002550.2-201ENST00000621246 394 ntBASIC6.35□□□□□ -1.39
SOX4Q06945 AC093591.3-201ENST00000634516 308 ntBASIC6.35□□□□□ -1.39
SOX4Q06945 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.35□□□□□ -1.39
SOX4Q06945 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SOX4Q06945 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SOX4Q06945 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
SOX4Q06945 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.35□□□□□ -1.39
SOX4Q06945 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.35□□□□□ -1.39
SOX4Q06945 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SOX4Q06945 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
SOX4Q06945 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.35□□□□□ -1.39
SOX4Q06945 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SOX4Q06945 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SOX4Q06945 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SOX4Q06945 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.34□□□□□ -1.39
SOX4Q06945 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.34□□□□□ -1.39
SOX4Q06945 GTF2H2B-203ENST00000508065 1432 ntBASIC6.34□□□□□ -1.39
SOX4Q06945 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.34□□□□□ -1.39
SOX4Q06945 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SOX4Q06945 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.34□□□□□ -1.39
SOX4Q06945 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SOX4Q06945 HSPA8P17-201ENST00000427029 1382 ntBASIC6.34□□□□□ -1.39
SOX4Q06945 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SOX4Q06945 AC107982.1-201ENST00000507171 1300 ntBASIC6.34□□□□□ -1.39
SOX4Q06945 AC090220.1-201ENST00000593078 1699 ntBASIC6.34□□□□□ -1.39
SOX4Q06945 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SOX4Q06945 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SOX4Q06945 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
SOX4Q06945 MIR375-201ENST00000362103 64 ntBASIC6.34□□□□□ -1.39
SOX4Q06945 RNU6-332P-201ENST00000391193 108 ntBASIC6.34□□□□□ -1.39
SOX4Q06945 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SOX4Q06945 OR2W4P-201ENST00000406496 926 ntBASIC6.34□□□□□ -1.39
SOX4Q06945 RPS3AP2-201ENST00000407190 754 ntBASIC6.34□□□□□ -1.39
SOX4Q06945 RN7SKP206-201ENST00000410823 293 ntBASIC6.34□□□□□ -1.39
SOX4Q06945 AL354751.2-201ENST00000415471 210 ntBASIC6.34□□□□□ -1.39
SOX4Q06945 RPS17P17-201ENST00000419392 409 ntBASIC6.34□□□□□ -1.39
SOX4Q06945 AC093155.2-201ENST00000420734 937 ntBASIC6.34□□□□□ -1.39
SOX4Q06945 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
SOX4Q06945 AC007559.1-201ENST00000428736 355 ntBASIC6.34□□□□□ -1.39
SOX4Q06945 RPL7P29-201ENST00000437151 728 ntBASIC6.34□□□□□ -1.39
SOX4Q06945 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.34□□□□□ -1.39
SOX4Q06945 AL663074.2-201ENST00000440621 479 ntBASIC6.34□□□□□ -1.39
SOX4Q06945 AC064862.4-201ENST00000442180 334 ntBASIC6.34□□□□□ -1.39
SOX4Q06945 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.34□□□□□ -1.39
SOX4Q06945 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC6.34□□□□□ -1.39
SOX4Q06945 NIPA2P5-201ENST00000452282 464 ntBASIC6.34□□□□□ -1.39
SOX4Q06945 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC6.34□□□□□ -1.39
SOX4Q06945 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SOX4Q06945 AC112206.1-201ENST00000468416 477 ntBASIC6.34□□□□□ -1.39
SOX4Q06945 RN7SL174P-201ENST00000475578 289 ntBASIC6.34□□□□□ -1.39
SOX4Q06945 RPL38P3-201ENST00000484463 213 ntBASIC6.34□□□□□ -1.39
SOX4Q06945 AC091544.1-201ENST00000484702 348 ntBASIC6.34□□□□□ -1.39
SOX4Q06945 AL035690.1-201ENST00000490892 383 ntBASIC6.34□□□□□ -1.39
SOX4Q06945 HMGB1P29-201ENST00000505659 499 ntBASIC6.34□□□□□ -1.39
SOX4Q06945 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.34□□□□□ -1.39
SOX4Q06945 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC6.34□□□□□ -1.39
SOX4Q06945 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC6.34□□□□□ -1.39
SOX4Q06945 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC6.34□□□□□ -1.39
SOX4Q06945 CBX3P5-201ENST00000552017 521 ntBASIC6.34□□□□□ -1.39
SOX4Q06945 AC087477.6-201ENST00000559595 843 ntBASIC6.34□□□□□ -1.39
SOX4Q06945 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.34□□□□□ -1.39
SOX4Q06945 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.34□□□□□ -1.39
SOX4Q06945 AC010928.3-201ENST00000587712 541 ntBASIC6.34□□□□□ -1.39
SOX4Q06945 AC010487.1-201ENST00000594408 1172 ntBASIC6.34□□□□□ -1.39
SOX4Q06945 AC007363.1-201ENST00000604736 620 ntBASIC6.34□□□□□ -1.39
SOX4Q06945 AC145423.1-201ENST00000605712 336 ntBASIC6.34□□□□□ -1.39
SOX4Q06945 RNA5SP440-201ENST00000612665 119 ntBASIC6.34□□□□□ -1.39
SOX4Q06945 AC015871.5-202ENST00000623252 701 ntBASIC6.34□□□□□ -1.39
SOX4Q06945 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.34□□□□□ -1.39
SOX4Q06945 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.34□□□□□ -1.39
SOX4Q06945 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
SOX4Q06945 AL662795.2-201ENST00000624252 3706 ntBASIC6.34□□□□□ -1.39
SOX4Q06945 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC6.34□□□□□ -1.39
SOX4Q06945 AC005261.2-201ENST00000593427 4258 ntBASIC6.34□□□□□ -1.39
SOX4Q06945 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
SOX4Q06945 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
SOX4Q06945 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.34□□□□□ -1.4
SOX4Q06945 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
SOX4Q06945 AC093909.5-201ENST00000621839 1799 ntBASIC6.34□□□□□ -1.4
SOX4Q06945 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.4
SOX4Q06945 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SOX4Q06945 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SOX4Q06945 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SOX4Q06945 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.33□□□□□ -1.4
SOX4Q06945 OR5BR1P-201ENST00000524992 1330 ntBASIC6.33□□□□□ -1.4
SOX4Q06945 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC6.33□□□□□ -1.4
SOX4Q06945 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
SOX4Q06945 AC079753.1-201ENST00000623243 3868 ntBASIC6.33□□□□□ -1.4
SOX4Q06945 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SOX4Q06945 RNU6-839P-201ENST00000363347 108 ntBASIC6.33□□□□□ -1.4
SOX4Q06945 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms