Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC012603.1-201ENST00000606424 528 ntBASIC4.06□□□□□ -1.76
HMGCS1Q01581 AC008785.1-201ENST00000624475 456 ntBASIC4.06□□□□□ -1.76
HMGCS1Q01581 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HMGCS1Q01581 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HMGCS1Q01581 BX005019.1-201ENST00000561881 1810 ntBASIC4.06□□□□□ -1.76
HMGCS1Q01581 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HMGCS1Q01581 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.06□□□□□ -1.76
HMGCS1Q01581 EIF2AP4-201ENST00000424793 1781 ntBASIC4.06□□□□□ -1.76
HMGCS1Q01581 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HMGCS1Q01581 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.06□□□□□ -1.76
HMGCS1Q01581 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
HMGCS1Q01581 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HMGCS1Q01581 AL356317.1-201ENST00000396110 1436 ntBASIC4.05□□□□□ -1.76
HMGCS1Q01581 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HMGCS1Q01581 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HMGCS1Q01581 IGKV7-3-201ENST00000357453 298 ntBASIC4.05□□□□□ -1.76
HMGCS1Q01581 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HMGCS1Q01581 RNU6-891P-201ENST00000384280 111 ntBASIC4.05□□□□□ -1.76
HMGCS1Q01581 MIR93-201ENST00000385024 80 ntBASIC4.05□□□□□ -1.76
HMGCS1Q01581 U3.22-201ENST00000391120 215 ntBASIC4.05□□□□□ -1.76
HMGCS1Q01581 MIR1179-201ENST00000408703 91 ntBASIC4.05□□□□□ -1.76
HMGCS1Q01581 AP000357.1-201ENST00000409926 1165 ntBASIC4.05□□□□□ -1.76
HMGCS1Q01581 RN7SKP235-201ENST00000410662 305 ntBASIC4.05□□□□□ -1.76
HMGCS1Q01581 AC093084.1-201ENST00000424233 687 ntBASIC4.05□□□□□ -1.76
HMGCS1Q01581 RPL12P34-201ENST00000424532 479 ntBASIC4.05□□□□□ -1.76
HMGCS1Q01581 AL732292.1-201ENST00000426692 226 ntBASIC4.05□□□□□ -1.76
HMGCS1Q01581 ELOCP18-201ENST00000434209 337 ntBASIC4.05□□□□□ -1.76
HMGCS1Q01581 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.05□□□□□ -1.76
HMGCS1Q01581 AC006517.1-201ENST00000480485 328 ntBASIC4.05□□□□□ -1.76
HMGCS1Q01581 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HMGCS1Q01581 BNIP3P41-201ENST00000503774 571 ntBASIC4.05□□□□□ -1.76
HMGCS1Q01581 RNA5SP519-201ENST00000516480 119 ntBASIC4.05□□□□□ -1.76
HMGCS1Q01581 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.05□□□□□ -1.76
HMGCS1Q01581 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.05□□□□□ -1.76
HMGCS1Q01581 C1GALT1P3-201ENST00000522049 819 ntBASIC4.05□□□□□ -1.76
HMGCS1Q01581 AC022784.5-201ENST00000522241 437 ntBASIC4.05□□□□□ -1.76
HMGCS1Q01581 OR5M7P-201ENST00000526140 972 ntBASIC4.05□□□□□ -1.76
HMGCS1Q01581 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.05□□□□□ -1.76
HMGCS1Q01581 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.05□□□□□ -1.76
HMGCS1Q01581 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.05□□□□□ -1.76
HMGCS1Q01581 FAM60CP-201ENST00000591086 664 ntBASIC4.05□□□□□ -1.76
HMGCS1Q01581 AC015922.4-201ENST00000612568 690 ntBASIC4.05□□□□□ -1.76
HMGCS1Q01581 AP003497.2-201ENST00000624220 967 ntBASIC4.05□□□□□ -1.76
HMGCS1Q01581 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.05□□□□□ -1.76
HMGCS1Q01581 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HMGCS1Q01581 AL158163.1-201ENST00000603915 1649 ntBASIC4.05□□□□□ -1.76
HMGCS1Q01581 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HMGCS1Q01581 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
HMGCS1Q01581 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HMGCS1Q01581 OR10AB1P-202ENST00000641219 1686 ntBASIC4.04□□□□□ -1.76
HMGCS1Q01581 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.04□□□□□ -1.76
HMGCS1Q01581 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.04□□□□□ -1.76
HMGCS1Q01581 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HMGCS1Q01581 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
HMGCS1Q01581 AC011155.1-201ENST00000316512 456 ntBASIC4.04□□□□□ -1.76
HMGCS1Q01581 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
HMGCS1Q01581 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
HMGCS1Q01581 MIR448-201ENST00000362131 111 ntBASIC4.04□□□□□ -1.76
HMGCS1Q01581 RNU4-39P-201ENST00000362455 127 ntBASIC4.04□□□□□ -1.76
HMGCS1Q01581 RNU1-14P-201ENST00000362759 152 ntBASIC4.04□□□□□ -1.76
HMGCS1Q01581 Y_RNA.625-201ENST00000411256 107 ntBASIC4.04□□□□□ -1.76
HMGCS1Q01581 AL160275.2-201ENST00000412010 394 ntBASIC4.04□□□□□ -1.76
HMGCS1Q01581 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HMGCS1Q01581 IPMKP1-201ENST00000425988 855 ntBASIC4.04□□□□□ -1.76
HMGCS1Q01581 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.04□□□□□ -1.76
HMGCS1Q01581 AL353597.2-202ENST00000434901 373 ntBASIC4.04□□□□□ -1.76
HMGCS1Q01581 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.04□□□□□ -1.76
HMGCS1Q01581 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.04□□□□□ -1.76
HMGCS1Q01581 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.04□□□□□ -1.76
HMGCS1Q01581 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.04□□□□□ -1.76
HMGCS1Q01581 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.04□□□□□ -1.76
HMGCS1Q01581 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.04□□□□□ -1.76
HMGCS1Q01581 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.04□□□□□ -1.76
HMGCS1Q01581 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.04□□□□□ -1.76
HMGCS1Q01581 RPL23AP24-201ENST00000458203 385 ntBASIC4.04□□□□□ -1.76
HMGCS1Q01581 AC105918.1-201ENST00000474399 838 ntBASIC4.04□□□□□ -1.76
HMGCS1Q01581 RN7SL481P-201ENST00000477764 299 ntBASIC4.04□□□□□ -1.76
HMGCS1Q01581 RN7SL810P-201ENST00000493031 276 ntBASIC4.04□□□□□ -1.76
HMGCS1Q01581 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.04□□□□□ -1.76
HMGCS1Q01581 AC034205.1-201ENST00000520621 638 ntBASIC4.04□□□□□ -1.76
HMGCS1Q01581 AC009643.1-201ENST00000532030 391 ntBASIC4.04□□□□□ -1.76
HMGCS1Q01581 UBTFL9-201ENST00000534504 1148 ntBASIC4.04□□□□□ -1.76
HMGCS1Q01581 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.04□□□□□ -1.76
HMGCS1Q01581 AC063950.1-201ENST00000552036 308 ntBASIC4.04□□□□□ -1.76
HMGCS1Q01581 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
HMGCS1Q01581 HMGB3P26-201ENST00000560051 582 ntBASIC4.04□□□□□ -1.76
HMGCS1Q01581 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.04□□□□□ -1.76
HMGCS1Q01581 MIR4277-201ENST00000578298 84 ntBASIC4.04□□□□□ -1.76
HMGCS1Q01581 AC008638.3-201ENST00000603341 463 ntBASIC4.04□□□□□ -1.76
HMGCS1Q01581 AL592494.3-201ENST00000609485 464 ntBASIC4.04□□□□□ -1.76
HMGCS1Q01581 AL121873.1-201ENST00000616013 524 ntBASIC4.04□□□□□ -1.76
HMGCS1Q01581 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.04□□□□□ -1.76
HMGCS1Q01581 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HMGCS1Q01581 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HMGCS1Q01581 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
HMGCS1Q01581 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HMGCS1Q01581 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.04□□□□□ -1.76
HMGCS1Q01581 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
HMGCS1Q01581 AL592182.3-201ENST00000642132 3304 ntBASIC4.03□□□□□ -1.76
HMGCS1Q01581 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms