Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.85□□□□□ -1.63
RAE1P78406 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.85□□□□□ -1.63
RAE1P78406 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC4.85□□□□□ -1.63
RAE1P78406 AC135628.1-201ENST00000568867 534 ntBASIC4.85□□□□□ -1.63
RAE1P78406 AC012146.2-201ENST00000576545 416 ntBASIC4.85□□□□□ -1.63
RAE1P78406 AC106791.2-201ENST00000604680 391 ntBASIC4.85□□□□□ -1.63
RAE1P78406 AC096553.1-201ENST00000605169 829 ntBASIC4.85□□□□□ -1.63
RAE1P78406 AL354976.1-201ENST00000613843 387 ntBASIC4.85□□□□□ -1.63
RAE1P78406 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.85□□□□□ -1.63
RAE1P78406 ATE1-AS1-202ENST00000636460 506 ntBASIC4.85□□□□□ -1.63
RAE1P78406 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
RAE1P78406 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.85□□□□□ -1.63
RAE1P78406 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RAE1P78406 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.85□□□□□ -1.63
RAE1P78406 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RAE1P78406 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RAE1P78406 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RAE1P78406 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RAE1P78406 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.85□□□□□ -1.63
RAE1P78406 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RAE1P78406 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
RAE1P78406 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
RAE1P78406 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RAE1P78406 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.84□□□□□ -1.63
RAE1P78406 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.84□□□□□ -1.63
RAE1P78406 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RAE1P78406 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC4.84□□□□□ -1.63
RAE1P78406 AC011447.7-201ENST00000624228 1590 ntBASIC4.84□□□□□ -1.63
RAE1P78406 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RAE1P78406 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RAE1P78406 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
RAE1P78406 RNU6-757P-201ENST00000410334 100 ntBASIC4.84□□□□□ -1.63
RAE1P78406 RNA5SP80-201ENST00000410475 111 ntBASIC4.84□□□□□ -1.63
RAE1P78406 RN7SKP182-201ENST00000410772 298 ntBASIC4.84□□□□□ -1.63
RAE1P78406 RNU2-6P-201ENST00000411404 190 ntBASIC4.84□□□□□ -1.63
RAE1P78406 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.84□□□□□ -1.63
RAE1P78406 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.84□□□□□ -1.63
RAE1P78406 AC007738.1-201ENST00000413892 348 ntBASIC4.84□□□□□ -1.63
RAE1P78406 SLC35E1P1-201ENST00000419313 864 ntBASIC4.84□□□□□ -1.63
RAE1P78406 AC048351.1-201ENST00000420064 602 ntBASIC4.84□□□□□ -1.63
RAE1P78406 MRPS36P1-201ENST00000421291 307 ntBASIC4.84□□□□□ -1.63
RAE1P78406 RPL7P44-201ENST00000424827 742 ntBASIC4.84□□□□□ -1.63
RAE1P78406 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.84□□□□□ -1.63
RAE1P78406 AC073069.1-201ENST00000428657 441 ntBASIC4.84□□□□□ -1.63
RAE1P78406 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.84□□□□□ -1.63
RAE1P78406 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.84□□□□□ -1.63
RAE1P78406 MTCYBP34-201ENST00000439552 670 ntBASIC4.84□□□□□ -1.63
RAE1P78406 RPL12P11-201ENST00000439970 501 ntBASIC4.84□□□□□ -1.63
RAE1P78406 UBE2V1P5-201ENST00000440070 405 ntBASIC4.84□□□□□ -1.63
RAE1P78406 TXNP5-201ENST00000441043 315 ntBASIC4.84□□□□□ -1.63
RAE1P78406 ARL4AP3-201ENST00000441452 574 ntBASIC4.84□□□□□ -1.63
RAE1P78406 BTF3P6-201ENST00000448054 499 ntBASIC4.84□□□□□ -1.63
RAE1P78406 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RAE1P78406 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RAE1P78406 RFC5P1-201ENST00000454419 874 ntBASIC4.84□□□□□ -1.63
RAE1P78406 AL109741.2-201ENST00000455561 343 ntBASIC4.84□□□□□ -1.63
RAE1P78406 AC091180.1-201ENST00000462104 372 ntBASIC4.84□□□□□ -1.63
RAE1P78406 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.84□□□□□ -1.63
RAE1P78406 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.84□□□□□ -1.63
RAE1P78406 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.84□□□□□ -1.63
RAE1P78406 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC4.84□□□□□ -1.63
RAE1P78406 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.84□□□□□ -1.63
RAE1P78406 AC018442.3-201ENST00000523025 183 ntBASIC4.84□□□□□ -1.63
RAE1P78406 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.84□□□□□ -1.63
RAE1P78406 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RAE1P78406 AC005832.3-201ENST00000537929 631 ntBASIC4.84□□□□□ -1.63
RAE1P78406 NDUFB4P11-201ENST00000560510 395 ntBASIC4.84□□□□□ -1.63
RAE1P78406 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.84□□□□□ -1.63
RAE1P78406 AC022069.1-201ENST00000582910 658 ntBASIC4.84□□□□□ -1.63
RAE1P78406 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4.84□□□□□ -1.63
RAE1P78406 NBR2-204ENST00000587322 63 ntBASIC4.84□□□□□ -1.63
RAE1P78406 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.84□□□□□ -1.63
RAE1P78406 VN1R82P-201ENST00000601481 356 ntBASIC4.84□□□□□ -1.63
RAE1P78406 NTAN1P1-201ENST00000603150 646 ntBASIC4.84□□□□□ -1.63
RAE1P78406 AC012557.2-201ENST00000605919 418 ntBASIC4.84□□□□□ -1.63
RAE1P78406 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.84□□□□□ -1.63
RAE1P78406 AP004247.3-201ENST00000608682 624 ntBASIC4.84□□□□□ -1.63
RAE1P78406 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.84□□□□□ -1.63
RAE1P78406 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
RAE1P78406 AF001550.2-201ENST00000636643 217 ntBASIC4.84□□□□□ -1.63
RAE1P78406 SAMMSON-227ENST00000642114 1199 ntBASIC4.84□□□□□ -1.63
RAE1P78406 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
RAE1P78406 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RAE1P78406 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
RAE1P78406 MAPK10-338ENST00000641647 3362 ntBASIC4.84□□□□□ -1.64
RAE1P78406 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.83□□□□□ -1.64
RAE1P78406 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
RAE1P78406 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RAE1P78406 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.83□□□□□ -1.64
RAE1P78406 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RAE1P78406 AC021755.1-201ENST00000559747 1447 ntBASIC4.83□□□□□ -1.64
RAE1P78406 AL022311.1-201ENST00000623726 19416 ntBASIC4.83□□□□□ -1.64
RAE1P78406 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RAE1P78406 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RAE1P78406 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
RAE1P78406 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RAE1P78406 SNORA17.1-201ENST00000362945 126 ntBASIC4.83□□□□□ -1.64
RAE1P78406 RNU6-249P-201ENST00000363016 102 ntBASIC4.83□□□□□ -1.64
RAE1P78406 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RAE1P78406 U3.23-201ENST00000391132 200 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms