Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC2.72□□□□□ -1.97
RPL39P62891 MIR6868-201ENST00000611215 58 ntBASIC2.72□□□□□ -1.97
RPL39P62891 MIR6780A-201ENST00000615089 68 ntBASIC2.72□□□□□ -1.97
RPL39P62891 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC2.72□□□□□ -1.97
RPL39P62891 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
RPL39P62891 AC073073.2-201ENST00000609827 2578 ntBASIC2.72□□□□□ -1.97
RPL39P62891 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
RPL39P62891 TOPORSLP1-201ENST00000467693 2102 ntBASIC2.72□□□□□ -1.97
RPL39P62891 AL132640.2-201ENST00000559968 1698 ntBASIC2.72□□□□□ -1.97
RPL39P62891 TNPO1P3-201ENST00000436471 2662 ntBASIC2.72□□□□□ -1.97
RPL39P62891 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC2.72□□□□□ -1.97
RPL39P62891 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC2.71□□□□□ -1.97
RPL39P62891 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC2.71□□□□□ -1.97
RPL39P62891 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC2.71□□□□□ -1.97
RPL39P62891 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC2.71□□□□□ -1.97
RPL39P62891 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
RPL39P62891 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
RPL39P62891 CR788268.1-201ENST00000603931 1809 ntBASIC2.71□□□□□ -1.98
RPL39P62891 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
RPL39P62891 RNU11-4P-201ENST00000391149 133 ntBASIC2.71□□□□□ -1.98
RPL39P62891 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
RPL39P62891 SNORA11.3-201ENST00000408471 128 ntBASIC2.71□□□□□ -1.98
RPL39P62891 AC011933.1-201ENST00000413334 321 ntBASIC2.71□□□□□ -1.98
RPL39P62891 AC115285.1-201ENST00000424879 736 ntBASIC2.71□□□□□ -1.98
RPL39P62891 OR5AW1P-201ENST00000426334 1006 ntBASIC2.71□□□□□ -1.98
RPL39P62891 USP9YP9-201ENST00000429406 715 ntBASIC2.71□□□□□ -1.98
RPL39P62891 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC2.71□□□□□ -1.98
RPL39P62891 BTF3P10-201ENST00000433415 495 ntBASIC2.71□□□□□ -1.98
RPL39P62891 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC2.71□□□□□ -1.98
RPL39P62891 FHP1-201ENST00000442741 703 ntBASIC2.71□□□□□ -1.98
RPL39P62891 RPS29P31-201ENST00000446147 164 ntBASIC2.71□□□□□ -1.98
RPL39P62891 NANOGP10-201ENST00000453325 895 ntBASIC2.71□□□□□ -1.98
RPL39P62891 AC116533.1-201ENST00000459748 321 ntBASIC2.71□□□□□ -1.98
RPL39P62891 AK3P4-201ENST00000504283 583 ntBASIC2.71□□□□□ -1.98
RPL39P62891 RN7SKP209-201ENST00000516888 304 ntBASIC2.71□□□□□ -1.98
RPL39P62891 RN7SKP92-201ENST00000517266 244 ntBASIC2.71□□□□□ -1.98
RPL39P62891 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC2.71□□□□□ -1.98
RPL39P62891 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC2.71□□□□□ -1.98
RPL39P62891 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC2.71□□□□□ -1.98
RPL39P62891 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC2.71□□□□□ -1.98
RPL39P62891 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC2.71□□□□□ -1.98
RPL39P62891 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC2.71□□□□□ -1.98
RPL39P62891 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC2.71□□□□□ -1.98
RPL39P62891 AP002884.5-201ENST00000595053 1132 ntBASIC2.71□□□□□ -1.98
RPL39P62891 AC020915.5-201ENST00000596836 964 ntBASIC2.71□□□□□ -1.98
RPL39P62891 AL139286.1-201ENST00000604465 483 ntBASIC2.71□□□□□ -1.98
RPL39P62891 AC131238.1-201ENST00000617135 328 ntBASIC2.71□□□□□ -1.98
RPL39P62891 SNORA11.6-201ENST00000619030 128 ntBASIC2.71□□□□□ -1.98
RPL39P62891 OR5AC4P-202ENST00000642086 985 ntBASIC2.71□□□□□ -1.98
RPL39P62891 CEP170P1-201ENST00000502249 4587 ntBASIC2.71□□□□□ -1.98
RPL39P62891 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
RPL39P62891 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
RPL39P62891 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
RPL39P62891 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
RPL39P62891 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC2.71□□□□□ -1.98
RPL39P62891 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
RPL39P62891 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
RPL39P62891 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
RPL39P62891 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
RPL39P62891 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
RPL39P62891 CIR1P2-201ENST00000514821 1342 ntBASIC2.7□□□□□ -1.98
RPL39P62891 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
RPL39P62891 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC2.7□□□□□ -1.98
RPL39P62891 API5-210ENST00000534600 1760 ntTSL 5 BASIC2.7□□□□□ -1.98
RPL39P62891 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
RPL39P62891 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
RPL39P62891 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
RPL39P62891 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
RPL39P62891 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC2.7□□□□□ -1.98
RPL39P62891 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC2.7□□□□□ -1.98
RPL39P62891 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC2.7□□□□□ -1.98
RPL39P62891 AL590806.1-201ENST00000415818 853 ntBASIC2.7□□□□□ -1.98
RPL39P62891 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
RPL39P62891 AC114814.2-201ENST00000419195 485 ntBASIC2.7□□□□□ -1.98
RPL39P62891 RPL12P28-201ENST00000430852 489 ntBASIC2.7□□□□□ -1.98
RPL39P62891 IGKV1OR9-2-201ENST00000431378 277 ntBASIC2.7□□□□□ -1.98
RPL39P62891 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC2.7□□□□□ -1.98
RPL39P62891 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC2.7□□□□□ -1.98
RPL39P62891 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC2.7□□□□□ -1.98
RPL39P62891 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC2.7□□□□□ -1.98
RPL39P62891 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC2.7□□□□□ -1.98
RPL39P62891 AC005229.2-201ENST00000456995 399 ntBASIC2.7□□□□□ -1.98
RPL39P62891 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
RPL39P62891 AC084198.1-201ENST00000477747 402 ntBASIC2.7□□□□□ -1.98
RPL39P62891 AC041039.1-201ENST00000485656 536 ntBASIC2.7□□□□□ -1.98
RPL39P62891 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC2.7□□□□□ -1.98
RPL39P62891 AL132838.2-201ENST00000492041 314 ntBASIC2.7□□□□□ -1.98
RPL39P62891 AC093720.1-201ENST00000505681 714 ntBASIC2.7□□□□□ -1.98
RPL39P62891 AC108475.1-201ENST00000507880 950 ntBASIC2.7□□□□□ -1.98
RPL39P62891 RNA5SP208-201ENST00000516156 78 ntBASIC2.7□□□□□ -1.98
RPL39P62891 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC2.7□□□□□ -1.98
RPL39P62891 OR4A12P-201ENST00000530847 918 ntBASIC2.7□□□□□ -1.98
RPL39P62891 CYCSP29-201ENST00000533731 318 ntBASIC2.7□□□□□ -1.98
RPL39P62891 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC2.7□□□□□ -1.98
RPL39P62891 AC068831.4-201ENST00000556118 109 ntBASIC2.7□□□□□ -1.98
RPL39P62891 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC2.7□□□□□ -1.98
RPL39P62891 AC084759.1-201ENST00000561168 290 ntBASIC2.7□□□□□ -1.98
RPL39P62891 MIR4480-201ENST00000582492 71 ntBASIC2.7□□□□□ -1.98
RPL39P62891 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
RPL39P62891 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms