Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LMO4P61968 AC109446.4-201ENST00000623235 2755 ntBASIC3.91□□□□□ -1.78
LMO4P61968 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC3.91□□□□□ -1.78
LMO4P61968 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
LMO4P61968 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LMO4P61968 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
LMO4P61968 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LMO4P61968 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
LMO4P61968 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
LMO4P61968 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC3.91□□□□□ -1.78
LMO4P61968 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
LMO4P61968 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.91□□□□□ -1.78
LMO4P61968 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
LMO4P61968 RNU6-354P-201ENST00000383862 107 ntBASIC3.91□□□□□ -1.78
LMO4P61968 RNU6-610P-201ENST00000384264 107 ntBASIC3.91□□□□□ -1.78
LMO4P61968 AL355615.1-201ENST00000406187 641 ntBASIC3.91□□□□□ -1.78
LMO4P61968 HNRNPDP2-201ENST00000406475 478 ntBASIC3.91□□□□□ -1.78
LMO4P61968 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC3.91□□□□□ -1.78
LMO4P61968 DPY19L1P2-201ENST00000426647 915 ntBASIC3.91□□□□□ -1.78
LMO4P61968 RPL35AP21-201ENST00000437667 333 ntBASIC3.91□□□□□ -1.78
LMO4P61968 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC3.91□□□□□ -1.78
LMO4P61968 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC3.91□□□□□ -1.78
LMO4P61968 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.91□□□□□ -1.78
LMO4P61968 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC3.91□□□□□ -1.78
LMO4P61968 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC3.91□□□□□ -1.78
LMO4P61968 AL162591.2-201ENST00000449634 317 ntBASIC3.91□□□□□ -1.78
LMO4P61968 AL591363.1-201ENST00000450091 483 ntBASIC3.91□□□□□ -1.78
LMO4P61968 APOA2-207ENST00000470459 416 ntTSL 5 BASIC3.91□□□□□ -1.78
LMO4P61968 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LMO4P61968 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC3.91□□□□□ -1.78
LMO4P61968 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC3.91□□□□□ -1.78
LMO4P61968 AC091163.3-201ENST00000518269 1144 ntBASIC3.91□□□□□ -1.78
LMO4P61968 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LMO4P61968 AC009643.1-201ENST00000532030 391 ntBASIC3.91□□□□□ -1.78
LMO4P61968 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.91□□□□□ -1.78
LMO4P61968 AC005868.1-201ENST00000536421 331 ntBASIC3.91□□□□□ -1.78
LMO4P61968 OSBPL9P5-201ENST00000542581 171 ntBASIC3.91□□□□□ -1.78
LMO4P61968 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC3.91□□□□□ -1.78
LMO4P61968 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.91□□□□□ -1.78
LMO4P61968 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
LMO4P61968 MTCYBP23-201ENST00000558717 1102 ntBASIC3.91□□□□□ -1.78
LMO4P61968 AC022884.3-201ENST00000579571 248 ntBASIC3.91□□□□□ -1.78
LMO4P61968 AP005119.2-201ENST00000579735 1105 ntBASIC3.91□□□□□ -1.78
LMO4P61968 AP000919.1-202ENST00000581139 1264 ntBASIC3.91□□□□□ -1.78
LMO4P61968 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.91□□□□□ -1.78
LMO4P61968 MIR4697-201ENST00000582977 78 ntBASIC3.91□□□□□ -1.78
LMO4P61968 PCNAP1-202ENST00000595299 752 ntBASIC3.91□□□□□ -1.78
LMO4P61968 Z94722.1-201ENST00000604328 474 ntBASIC3.91□□□□□ -1.78
LMO4P61968 OR7A19P-201ENST00000608051 733 ntBASIC3.91□□□□□ -1.78
LMO4P61968 AC122108.2-201ENST00000611946 526 ntBASIC3.91□□□□□ -1.78
LMO4P61968 AC083809.1-201ENST00000615051 472 ntBASIC3.91□□□□□ -1.78
LMO4P61968 AC011472.4-201ENST00000615848 491 ntBASIC3.91□□□□□ -1.78
LMO4P61968 AC021755.4-201ENST00000616620 456 ntBASIC3.91□□□□□ -1.78
LMO4P61968 AC004232.3-201ENST00000622977 525 ntBASIC3.91□□□□□ -1.78
LMO4P61968 AC093875.1-201ENST00000623688 504 ntBASIC3.91□□□□□ -1.78
LMO4P61968 FRG1EP-201ENST00000634469 770 ntBASIC3.91□□□□□ -1.78
LMO4P61968 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
LMO4P61968 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC3.91□□□□□ -1.78
LMO4P61968 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
LMO4P61968 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
LMO4P61968 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
LMO4P61968 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
LMO4P61968 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC3.91□□□□□ -1.78
LMO4P61968 FTX-210ENST00000603037 8347 ntTSL 5 BASIC3.91□□□□□ -1.78
LMO4P61968 WAC-209ENST00000428935 1320 ntTSL 2 BASIC3.91□□□□□ -1.78
LMO4P61968 AL513185.3-201ENST00000433335 1300 ntBASIC3.91□□□□□ -1.78
LMO4P61968 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC3.91□□□□□ -1.78
LMO4P61968 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC3.91□□□□□ -1.78
LMO4P61968 AC139713.2-214ENST00000642059 1811 ntBASIC3.91□□□□□ -1.78
LMO4P61968 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC3.91□□□□□ -1.78
LMO4P61968 AL592148.3-201ENST00000608771 2646 ntBASIC3.91□□□□□ -1.78
LMO4P61968 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
LMO4P61968 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
LMO4P61968 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC3.9□□□□□ -1.78
LMO4P61968 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
LMO4P61968 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
LMO4P61968 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
LMO4P61968 SOCS5P3-201ENST00000425115 1576 ntBASIC3.9□□□□□ -1.78
LMO4P61968 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
LMO4P61968 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LMO4P61968 U3.22-201ENST00000391120 215 ntBASIC3.9□□□□□ -1.79
LMO4P61968 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.9□□□□□ -1.79
LMO4P61968 AL590762.2-201ENST00000395798 571 ntBASIC3.9□□□□□ -1.79
LMO4P61968 ATP5F1P2-201ENST00000398143 760 ntBASIC3.9□□□□□ -1.79
LMO4P61968 AL049545.1-201ENST00000401856 572 ntBASIC3.9□□□□□ -1.79
LMO4P61968 FABP12P1-201ENST00000401911 322 ntBASIC3.9□□□□□ -1.79
LMO4P61968 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC3.9□□□□□ -1.79
LMO4P61968 AC007738.1-201ENST00000413892 348 ntBASIC3.9□□□□□ -1.79
LMO4P61968 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.9□□□□□ -1.79
LMO4P61968 RPEP3-201ENST00000425462 676 ntBASIC3.9□□□□□ -1.79
LMO4P61968 RPS6P15-201ENST00000431996 751 ntBASIC3.9□□□□□ -1.79
LMO4P61968 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.9□□□□□ -1.79
LMO4P61968 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
LMO4P61968 MED6P1-201ENST00000439659 713 ntBASIC3.9□□□□□ -1.79
LMO4P61968 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LMO4P61968 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.9□□□□□ -1.79
LMO4P61968 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LMO4P61968 OR6K5P-201ENST00000447050 945 ntBASIC3.9□□□□□ -1.79
LMO4P61968 Z73417.1-201ENST00000447373 778 ntBASIC3.9□□□□□ -1.79
LMO4P61968 TPT1P12-201ENST00000448968 492 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms