Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC5.06□□□□□ -1.6
CLRN1P58418 RN7SKP240-201ENST00000410583 375 ntBASIC5.06□□□□□ -1.6
CLRN1P58418 RPS6P23-201ENST00000413224 722 ntBASIC5.06□□□□□ -1.6
CLRN1P58418 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC5.06□□□□□ -1.6
CLRN1P58418 FCF1P2-201ENST00000415284 583 ntBASIC5.06□□□□□ -1.6
CLRN1P58418 ATG4AP1-201ENST00000416893 538 ntBASIC5.06□□□□□ -1.6
CLRN1P58418 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.06□□□□□ -1.6
CLRN1P58418 RPL24P2-201ENST00000421023 475 ntBASIC5.06□□□□□ -1.6
CLRN1P58418 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.06□□□□□ -1.6
CLRN1P58418 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC5.06□□□□□ -1.6
CLRN1P58418 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC5.06□□□□□ -1.6
CLRN1P58418 AC010975.2-201ENST00000427781 588 ntBASIC5.06□□□□□ -1.6
CLRN1P58418 MTND1P28-201ENST00000435623 950 ntBASIC5.06□□□□□ -1.6
CLRN1P58418 UBE2FP3-201ENST00000436366 524 ntBASIC5.06□□□□□ -1.6
CLRN1P58418 AL031667.1-201ENST00000440222 725 ntBASIC5.06□□□□□ -1.6
CLRN1P58418 RAB11AP1-201ENST00000442978 646 ntBASIC5.06□□□□□ -1.6
CLRN1P58418 RPL5P10-201ENST00000445207 894 ntBASIC5.06□□□□□ -1.6
CLRN1P58418 HLA-DPA3-207ENST00000454398 229 ntBASIC5.06□□□□□ -1.6
CLRN1P58418 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC5.06□□□□□ -1.6
CLRN1P58418 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.06□□□□□ -1.6
CLRN1P58418 RPS7P7-201ENST00000463499 571 ntBASIC5.06□□□□□ -1.6
CLRN1P58418 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC5.06□□□□□ -1.6
CLRN1P58418 AHI1-208ENST00000488690 712 ntTSL 5 BASIC5.06□□□□□ -1.6
CLRN1P58418 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC5.06□□□□□ -1.6
CLRN1P58418 AC109481.1-201ENST00000509173 282 ntBASIC5.06□□□□□ -1.6
CLRN1P58418 GAPDHP62-201ENST00000515313 990 ntBASIC5.06□□□□□ -1.6
CLRN1P58418 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC5.06□□□□□ -1.6
CLRN1P58418 FABP5P5-201ENST00000515537 406 ntBASIC5.06□□□□□ -1.6
CLRN1P58418 SNORA70.20-201ENST00000516848 126 ntBASIC5.06□□□□□ -1.6
CLRN1P58418 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.06□□□□□ -1.6
CLRN1P58418 TRIM77BP-201ENST00000524985 1119 ntBASIC5.06□□□□□ -1.6
CLRN1P58418 BCAS2P1-201ENST00000528022 632 ntBASIC5.06□□□□□ -1.6
CLRN1P58418 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.06□□□□□ -1.6
CLRN1P58418 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CLRN1P58418 NANOGNBP2-201ENST00000544753 553 ntBASIC5.06□□□□□ -1.6
CLRN1P58418 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC5.06□□□□□ -1.6
CLRN1P58418 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
CLRN1P58418 OR11J2P-201ENST00000555298 907 ntBASIC5.06□□□□□ -1.6
CLRN1P58418 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC5.06□□□□□ -1.6
CLRN1P58418 PCMTD1P2-201ENST00000565017 355 ntBASIC5.06□□□□□ -1.6
CLRN1P58418 AC093519.1-201ENST00000566109 298 ntBASIC5.06□□□□□ -1.6
CLRN1P58418 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.06□□□□□ -1.6
CLRN1P58418 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC5.06□□□□□ -1.6
CLRN1P58418 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.06□□□□□ -1.6
CLRN1P58418 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC5.06□□□□□ -1.6
CLRN1P58418 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.06□□□□□ -1.6
CLRN1P58418 AC012065.4-201ENST00000602445 679 ntBASIC5.06□□□□□ -1.6
CLRN1P58418 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.06□□□□□ -1.6
CLRN1P58418 AL031658.2-201ENST00000616850 651 ntBASIC5.06□□□□□ -1.6
CLRN1P58418 AL357080.1-201ENST00000617394 239 ntBASIC5.06□□□□□ -1.6
CLRN1P58418 AC073534.2-201ENST00000620377 381 ntBASIC5.06□□□□□ -1.6
CLRN1P58418 AC079228.1-201ENST00000624774 1049 ntBASIC5.06□□□□□ -1.6
CLRN1P58418 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.06□□□□□ -1.6
CLRN1P58418 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
CLRN1P58418 MIR193BHG-214ENST00000641765 509 ntBASIC5.06□□□□□ -1.6
CLRN1P58418 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.06□□□□□ -1.6
CLRN1P58418 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
CLRN1P58418 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLRN1P58418 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLRN1P58418 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLRN1P58418 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLRN1P58418 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.06□□□□□ -1.6
CLRN1P58418 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLRN1P58418 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLRN1P58418 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
CLRN1P58418 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.05□□□□□ -1.6
CLRN1P58418 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.05□□□□□ -1.6
CLRN1P58418 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CLRN1P58418 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLRN1P58418 MRE11P1-201ENST00000464884 2127 ntBASIC5.05□□□□□ -1.6
CLRN1P58418 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
CLRN1P58418 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
CLRN1P58418 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLRN1P58418 AL512646.1-201ENST00000269395 1077 ntBASIC5.05□□□□□ -1.6
CLRN1P58418 AL159987.1-201ENST00000347911 293 ntBASIC5.05□□□□□ -1.6
CLRN1P58418 AL121886.1-201ENST00000358609 435 ntBASIC5.05□□□□□ -1.6
CLRN1P58418 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CLRN1P58418 RNU6-433P-201ENST00000363216 104 ntBASIC5.05□□□□□ -1.6
CLRN1P58418 RNU5F-7P-201ENST00000363696 115 ntBASIC5.05□□□□□ -1.6
CLRN1P58418 RNU6-501P-201ENST00000364072 100 ntBASIC5.05□□□□□ -1.6
CLRN1P58418 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLRN1P58418 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.05□□□□□ -1.6
CLRN1P58418 RN7SKP33-201ENST00000410942 340 ntBASIC5.05□□□□□ -1.6
CLRN1P58418 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC5.05□□□□□ -1.6
CLRN1P58418 RPL21P108-201ENST00000413857 481 ntBASIC5.05□□□□□ -1.6
CLRN1P58418 AL354868.1-201ENST00000417077 482 ntBASIC5.05□□□□□ -1.6
CLRN1P58418 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.05□□□□□ -1.6
CLRN1P58418 AC092634.6-201ENST00000418558 192 ntBASIC5.05□□□□□ -1.6
CLRN1P58418 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC5.05□□□□□ -1.6
CLRN1P58418 AC048351.1-201ENST00000420064 602 ntBASIC5.05□□□□□ -1.6
CLRN1P58418 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.05□□□□□ -1.6
CLRN1P58418 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC5.05□□□□□ -1.6
CLRN1P58418 FNDC3CP-201ENST00000420795 1155 ntBASIC5.05□□□□□ -1.6
CLRN1P58418 MTCO3P1-205ENST00000422088 832 ntBASIC5.05□□□□□ -1.6
CLRN1P58418 RPS27AP7-201ENST00000422792 455 ntBASIC5.05□□□□□ -1.6
CLRN1P58418 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.05□□□□□ -1.6
CLRN1P58418 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.05□□□□□ -1.6
CLRN1P58418 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.05□□□□□ -1.6
CLRN1P58418 AL365184.2-201ENST00000431139 435 ntBASIC5.05□□□□□ -1.6
CLRN1P58418 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms