Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VSX2P58304 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VSX2P58304 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
VSX2P58304 LAP3P1-201ENST00000403648 294 ntBASIC4.11□□□□□ -1.75
VSX2P58304 RPL5P19-201ENST00000404228 893 ntBASIC4.11□□□□□ -1.75
VSX2P58304 AL035696.2-201ENST00000407941 709 ntBASIC4.11□□□□□ -1.75
VSX2P58304 AC009302.1-201ENST00000417147 390 ntBASIC4.11□□□□□ -1.75
VSX2P58304 EIF1P3-201ENST00000423841 334 ntBASIC4.11□□□□□ -1.75
VSX2P58304 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.11□□□□□ -1.75
VSX2P58304 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VSX2P58304 AL512326.1-201ENST00000443050 721 ntBASIC4.11□□□□□ -1.75
VSX2P58304 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.11□□□□□ -1.75
VSX2P58304 AL672167.3-201ENST00000465951 960 ntBASIC4.11□□□□□ -1.75
VSX2P58304 AC041039.1-201ENST00000485656 536 ntBASIC4.11□□□□□ -1.75
VSX2P58304 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
VSX2P58304 AC108475.1-201ENST00000507880 950 ntBASIC4.11□□□□□ -1.75
VSX2P58304 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.11□□□□□ -1.75
VSX2P58304 RNA5SP154-201ENST00000516193 111 ntBASIC4.11□□□□□ -1.75
VSX2P58304 SNORA31.9-201ENST00000516429 84 ntBASIC4.11□□□□□ -1.75
VSX2P58304 RNA5SP49-201ENST00000516450 115 ntBASIC4.11□□□□□ -1.75
VSX2P58304 MYL12AP1-201ENST00000518490 515 ntBASIC4.11□□□□□ -1.75
VSX2P58304 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.11□□□□□ -1.75
VSX2P58304 AC090151.1-201ENST00000520784 730 ntBASIC4.11□□□□□ -1.75
VSX2P58304 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.11□□□□□ -1.75
VSX2P58304 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
VSX2P58304 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.11□□□□□ -1.75
VSX2P58304 AL590392.1-201ENST00000604960 446 ntBASIC4.11□□□□□ -1.75
VSX2P58304 GMCL1P2-201ENST00000605230 823 ntBASIC4.11□□□□□ -1.75
VSX2P58304 MIR6716-201ENST00000613413 80 ntBASIC4.11□□□□□ -1.75
VSX2P58304 AL353726.1-201ENST00000614041 1000 ntBASIC4.11□□□□□ -1.75
VSX2P58304 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
VSX2P58304 AC007546.1-201ENST00000619452 559 ntBASIC4.11□□□□□ -1.75
VSX2P58304 MIR7154-201ENST00000620673 73 ntBASIC4.11□□□□□ -1.75
VSX2P58304 AL445363.3-201ENST00000623080 671 ntBASIC4.11□□□□□ -1.75
VSX2P58304 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.11□□□□□ -1.75
VSX2P58304 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
VSX2P58304 AC005261.4-201ENST00000600047 1385 ntBASIC4.11□□□□□ -1.75
VSX2P58304 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
VSX2P58304 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
VSX2P58304 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.11□□□□□ -1.75
VSX2P58304 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
VSX2P58304 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VSX2P58304 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VSX2P58304 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VSX2P58304 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
VSX2P58304 MAPK10-304ENST00000641341 3984 ntBASIC4.1□□□□□ -1.75
VSX2P58304 AC016588.2-201ENST00000632484 3021 ntBASIC4.1□□□□□ -1.75
VSX2P58304 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VSX2P58304 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VSX2P58304 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.1□□□□□ -1.75
VSX2P58304 MIR383-201ENST00000362257 73 ntBASIC4.1□□□□□ -1.75
VSX2P58304 RNA5SP52-201ENST00000362448 134 ntBASIC4.1□□□□□ -1.75
VSX2P58304 RNA5SP22-201ENST00000365393 109 ntBASIC4.1□□□□□ -1.75
VSX2P58304 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.1□□□□□ -1.75
VSX2P58304 RPL23AP38-201ENST00000423801 469 ntBASIC4.1□□□□□ -1.75
VSX2P58304 AL157831.1-201ENST00000426134 473 ntBASIC4.1□□□□□ -1.75
VSX2P58304 RSL24D1P6-201ENST00000426934 401 ntBASIC4.1□□□□□ -1.75
VSX2P58304 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VSX2P58304 AL138787.1-202ENST00000437804 898 ntBASIC4.1□□□□□ -1.75
VSX2P58304 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.1□□□□□ -1.75
VSX2P58304 AL162388.1-201ENST00000450912 352 ntBASIC4.1□□□□□ -1.75
VSX2P58304 AC103987.1-201ENST00000473394 348 ntBASIC4.1□□□□□ -1.75
VSX2P58304 AC091167.1-201ENST00000492017 396 ntBASIC4.1□□□□□ -1.75
VSX2P58304 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.1□□□□□ -1.75
VSX2P58304 AC008958.1-201ENST00000511047 682 ntBASIC4.1□□□□□ -1.75
VSX2P58304 RNA5SP519-201ENST00000516480 119 ntBASIC4.1□□□□□ -1.75
VSX2P58304 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.1□□□□□ -1.75
VSX2P58304 IGLV3-26-201ENST00000520756 302 ntBASIC4.1□□□□□ -1.75
VSX2P58304 CYCSP29-201ENST00000533731 318 ntBASIC4.1□□□□□ -1.75
VSX2P58304 SULT1C2P2-201ENST00000562517 294 ntBASIC4.1□□□□□ -1.75
VSX2P58304 AL121834.1-201ENST00000572284 509 ntBASIC4.1□□□□□ -1.75
VSX2P58304 FAM60CP-201ENST00000591086 664 ntBASIC4.1□□□□□ -1.75
VSX2P58304 AC008638.3-201ENST00000603341 463 ntBASIC4.1□□□□□ -1.75
VSX2P58304 AC005034.4-201ENST00000603612 899 ntBASIC4.1□□□□□ -1.75
VSX2P58304 AL135786.2-201ENST00000608422 615 ntBASIC4.1□□□□□ -1.75
VSX2P58304 AL592494.3-201ENST00000609485 464 ntBASIC4.1□□□□□ -1.75
VSX2P58304 AL138721.1-201ENST00000616756 179 ntBASIC4.1□□□□□ -1.75
VSX2P58304 MIR3653-201ENST00000625572 110 ntBASIC4.1□□□□□ -1.75
VSX2P58304 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.1□□□□□ -1.75
VSX2P58304 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.1□□□□□ -1.75
VSX2P58304 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
VSX2P58304 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VSX2P58304 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VSX2P58304 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
VSX2P58304 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
VSX2P58304 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
VSX2P58304 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
VSX2P58304 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
VSX2P58304 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
VSX2P58304 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
VSX2P58304 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
VSX2P58304 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
VSX2P58304 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.09□□□□□ -1.75
VSX2P58304 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.09□□□□□ -1.75
VSX2P58304 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
VSX2P58304 RNU1-14P-201ENST00000362759 152 ntBASIC4.09□□□□□ -1.75
VSX2P58304 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.09□□□□□ -1.75
VSX2P58304 HSPD1P16-201ENST00000402302 394 ntBASIC4.09□□□□□ -1.75
VSX2P58304 RN7SKP235-201ENST00000410662 305 ntBASIC4.09□□□□□ -1.75
VSX2P58304 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 150.6 ms