Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.5□□□□□ -1.69
CLDN20P56880 RN7SL176P-201ENST00000580352 264 ntBASIC4.5□□□□□ -1.69
CLDN20P56880 EIF1P6-201ENST00000600054 334 ntBASIC4.5□□□□□ -1.69
CLDN20P56880 AC233280.2-201ENST00000603917 1070 ntBASIC4.5□□□□□ -1.69
CLDN20P56880 AC098935.2-201ENST00000604222 466 ntBASIC4.5□□□□□ -1.69
CLDN20P56880 uc_338.18-201ENST00000615451 175 ntBASIC4.5□□□□□ -1.69
CLDN20P56880 MIR6730-201ENST00000622213 67 ntBASIC4.5□□□□□ -1.69
CLDN20P56880 AL356863.1-201ENST00000623378 1080 ntBASIC4.5□□□□□ -1.69
CLDN20P56880 AC112694.2-201ENST00000623697 768 ntBASIC4.5□□□□□ -1.69
CLDN20P56880 BX649567.1-201ENST00000642071 1134 ntBASIC4.5□□□□□ -1.69
CLDN20P56880 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CLDN20P56880 NSRP1P1-201ENST00000444067 1693 ntBASIC4.5□□□□□ -1.69
CLDN20P56880 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLDN20P56880 PCF11-AS1-201ENST00000602322 1516 ntBASIC4.5□□□□□ -1.69
CLDN20P56880 AC120338.1-201ENST00000625074 1541 ntBASIC4.5□□□□□ -1.69
CLDN20P56880 IRF5P1-201ENST00000504852 2164 ntBASIC4.5□□□□□ -1.69
CLDN20P56880 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLDN20P56880 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CLDN20P56880 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
CLDN20P56880 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLDN20P56880 NEAT1-202ENST00000501122 22743 ntBASIC4.49□□□□□ -1.69
CLDN20P56880 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CLDN20P56880 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CLDN20P56880 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
CLDN20P56880 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.49□□□□□ -1.69
CLDN20P56880 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.49□□□□□ -1.69
CLDN20P56880 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CLDN20P56880 IL6STP1-201ENST00000346911 1020 ntBASIC4.49□□□□□ -1.69
CLDN20P56880 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.49□□□□□ -1.69
CLDN20P56880 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
CLDN20P56880 RNU6-906P-201ENST00000384700 70 ntBASIC4.49□□□□□ -1.69
CLDN20P56880 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CLDN20P56880 Z97832.1-201ENST00000402490 328 ntBASIC4.49□□□□□ -1.69
CLDN20P56880 AP000580.1-201ENST00000404439 358 ntBASIC4.49□□□□□ -1.69
CLDN20P56880 AL590290.1-201ENST00000405336 380 ntBASIC4.49□□□□□ -1.69
CLDN20P56880 AP002530.1-201ENST00000405705 684 ntBASIC4.49□□□□□ -1.69
CLDN20P56880 BTF3P8-201ENST00000414577 526 ntBASIC4.49□□□□□ -1.69
CLDN20P56880 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.49□□□□□ -1.69
CLDN20P56880 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.49□□□□□ -1.69
CLDN20P56880 TAF13P2-201ENST00000416876 286 ntBASIC4.49□□□□□ -1.69
CLDN20P56880 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.49□□□□□ -1.69
CLDN20P56880 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.49□□□□□ -1.69
CLDN20P56880 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.49□□□□□ -1.69
CLDN20P56880 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.49□□□□□ -1.69
CLDN20P56880 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.49□□□□□ -1.69
CLDN20P56880 MTATP6P17-201ENST00000431030 672 ntBASIC4.49□□□□□ -1.69
CLDN20P56880 RPS27P18-201ENST00000431701 247 ntBASIC4.49□□□□□ -1.69
CLDN20P56880 MTCYBP15-201ENST00000433123 1127 ntBASIC4.49□□□□□ -1.69
CLDN20P56880 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.49□□□□□ -1.69
CLDN20P56880 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.49□□□□□ -1.69
CLDN20P56880 AL450023.3-201ENST00000440592 271 ntBASIC4.49□□□□□ -1.69
CLDN20P56880 VN1R25P-201ENST00000443385 738 ntBASIC4.49□□□□□ -1.69
CLDN20P56880 ELOCP13-201ENST00000443934 329 ntBASIC4.49□□□□□ -1.69
CLDN20P56880 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.49□□□□□ -1.69
CLDN20P56880 CASP3P1-201ENST00000446037 609 ntBASIC4.49□□□□□ -1.69
CLDN20P56880 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.49□□□□□ -1.69
CLDN20P56880 HIGD1AP8-201ENST00000453927 274 ntBASIC4.49□□□□□ -1.69
CLDN20P56880 AC092155.2-201ENST00000454675 477 ntBASIC4.49□□□□□ -1.69
CLDN20P56880 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.49□□□□□ -1.69
CLDN20P56880 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.49□□□□□ -1.69
CLDN20P56880 RPL23AP12-201ENST00000467573 473 ntBASIC4.49□□□□□ -1.69
CLDN20P56880 RPL23AP37-201ENST00000479658 549 ntBASIC4.49□□□□□ -1.69
CLDN20P56880 RPL7AP10-201ENST00000481016 791 ntBASIC4.49□□□□□ -1.69
CLDN20P56880 DEFB109F-201ENST00000491870 277 ntBASIC4.49□□□□□ -1.69
CLDN20P56880 AC098862.1-201ENST00000504991 413 ntBASIC4.49□□□□□ -1.69
CLDN20P56880 AC021146.3-201ENST00000511911 260 ntBASIC4.49□□□□□ -1.69
CLDN20P56880 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.49□□□□□ -1.69
CLDN20P56880 RNU6-311P-201ENST00000516224 102 ntBASIC4.49□□□□□ -1.69
CLDN20P56880 AC134698.5-201ENST00000519444 336 ntBASIC4.49□□□□□ -1.69
CLDN20P56880 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.49□□□□□ -1.69
CLDN20P56880 EEF1A1P37-201ENST00000522748 715 ntBASIC4.49□□□□□ -1.69
CLDN20P56880 AP001922.4-201ENST00000526967 290 ntBASIC4.49□□□□□ -1.69
CLDN20P56880 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.49□□□□□ -1.69
CLDN20P56880 AC008033.2-201ENST00000542626 177 ntBASIC4.49□□□□□ -1.69
CLDN20P56880 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CLDN20P56880 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.49□□□□□ -1.69
CLDN20P56880 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.49□□□□□ -1.69
CLDN20P56880 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.49□□□□□ -1.69
CLDN20P56880 AC009974.1-201ENST00000608881 455 ntBASIC4.49□□□□□ -1.69
CLDN20P56880 AC006946.3-201ENST00000609791 756 ntBASIC4.49□□□□□ -1.69
CLDN20P56880 AL121890.2-201ENST00000617644 465 ntBASIC4.49□□□□□ -1.69
CLDN20P56880 U6.48-201ENST00000618523 106 ntBASIC4.49□□□□□ -1.69
CLDN20P56880 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.49□□□□□ -1.69
CLDN20P56880 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.49□□□□□ -1.69
CLDN20P56880 RNF6P1-201ENST00000444889 1784 ntBASIC4.49□□□□□ -1.69
CLDN20P56880 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLDN20P56880 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLDN20P56880 MTCO1P6-201ENST00000481192 1384 ntBASIC4.49□□□□□ -1.69
CLDN20P56880 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
CLDN20P56880 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLDN20P56880 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLDN20P56880 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLDN20P56880 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.49□□□□□ -1.69
CLDN20P56880 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CLDN20P56880 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLDN20P56880 MTND4P31-201ENST00000425607 1343 ntBASIC4.48□□□□□ -1.69
CLDN20P56880 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.48□□□□□ -1.69
CLDN20P56880 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CLDN20P56880 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLDN20P56880 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms