Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 OR4V1P-201ENST00000525394 1140 ntBASIC4.19□□□□□ -1.74
PKNOX1P55347 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PKNOX1P55347 AC006064.5-201ENST00000541782 248 ntBASIC4.19□□□□□ -1.74
PKNOX1P55347 AL109766.1-201ENST00000555080 552 ntBASIC4.19□□□□□ -1.74
PKNOX1P55347 AC084783.1-201ENST00000565846 910 ntBASIC4.19□□□□□ -1.74
PKNOX1P55347 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.19□□□□□ -1.74
PKNOX1P55347 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.19□□□□□ -1.74
PKNOX1P55347 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.19□□□□□ -1.74
PKNOX1P55347 AC079791.1-201ENST00000605356 973 ntBASIC4.19□□□□□ -1.74
PKNOX1P55347 MIR6780A-201ENST00000615089 68 ntBASIC4.19□□□□□ -1.74
PKNOX1P55347 AC007546.1-201ENST00000619452 559 ntBASIC4.19□□□□□ -1.74
PKNOX1P55347 AC138907.10-201ENST00000623708 983 ntBASIC4.19□□□□□ -1.74
PKNOX1P55347 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.19□□□□□ -1.74
PKNOX1P55347 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.19□□□□□ -1.74
PKNOX1P55347 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.19□□□□□ -1.74
PKNOX1P55347 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
PKNOX1P55347 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PKNOX1P55347 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.18□□□□□ -1.74
PKNOX1P55347 AP000756.2-201ENST00000624168 2567 ntBASIC4.18□□□□□ -1.74
PKNOX1P55347 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PKNOX1P55347 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.18□□□□□ -1.74
PKNOX1P55347 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
PKNOX1P55347 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
PKNOX1P55347 OR5P1P-201ENST00000299512 925 ntBASIC4.18□□□□□ -1.74
PKNOX1P55347 RNA5SP502-201ENST00000362694 119 ntBASIC4.18□□□□□ -1.74
PKNOX1P55347 MIR550A3-201ENST00000390735 95 ntBASIC4.18□□□□□ -1.74
PKNOX1P55347 RN7SKP278-201ENST00000410504 342 ntBASIC4.18□□□□□ -1.74
PKNOX1P55347 MTCO1P57-201ENST00000432182 261 ntBASIC4.18□□□□□ -1.74
PKNOX1P55347 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.18□□□□□ -1.74
PKNOX1P55347 CEACAMP1-201ENST00000434624 1035 ntBASIC4.18□□□□□ -1.74
PKNOX1P55347 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.18□□□□□ -1.74
PKNOX1P55347 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.18□□□□□ -1.74
PKNOX1P55347 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.18□□□□□ -1.74
PKNOX1P55347 RN7SL585P-201ENST00000470538 280 ntBASIC4.18□□□□□ -1.74
PKNOX1P55347 RPS26P15-201ENST00000488067 348 ntBASIC4.18□□□□□ -1.74
PKNOX1P55347 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.18□□□□□ -1.74
PKNOX1P55347 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.18□□□□□ -1.74
PKNOX1P55347 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PKNOX1P55347 SNORA48.9-201ENST00000516419 162 ntBASIC4.18□□□□□ -1.74
PKNOX1P55347 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.18□□□□□ -1.74
PKNOX1P55347 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.18□□□□□ -1.74
PKNOX1P55347 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.18□□□□□ -1.74
PKNOX1P55347 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.18□□□□□ -1.74
PKNOX1P55347 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.18□□□□□ -1.74
PKNOX1P55347 AC025175.1-201ENST00000606482 759 ntBASIC4.18□□□□□ -1.74
PKNOX1P55347 AC233309.1-201ENST00000619522 751 ntBASIC4.18□□□□□ -1.74
PKNOX1P55347 MIR7702-201ENST00000621931 59 ntBASIC4.18□□□□□ -1.74
PKNOX1P55347 AC091953.3-201ENST00000623220 236 ntBASIC4.18□□□□□ -1.74
PKNOX1P55347 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
PKNOX1P55347 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PKNOX1P55347 AC009313.2-201ENST00000417893 1941 ntBASIC4.18□□□□□ -1.74
PKNOX1P55347 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PKNOX1P55347 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PKNOX1P55347 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.18□□□□□ -1.74
PKNOX1P55347 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PKNOX1P55347 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
PKNOX1P55347 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.18□□□□□ -1.74
PKNOX1P55347 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PKNOX1P55347 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
PKNOX1P55347 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
PKNOX1P55347 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
PKNOX1P55347 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
PKNOX1P55347 AC008033.1-201ENST00000216407 1162 ntBASIC4.17□□□□□ -1.74
PKNOX1P55347 AL603766.1-201ENST00000407763 664 ntBASIC4.17□□□□□ -1.74
PKNOX1P55347 SNORA11F-201ENST00000408237 128 ntBASIC4.17□□□□□ -1.74
PKNOX1P55347 MIR1179-201ENST00000408703 91 ntBASIC4.17□□□□□ -1.74
PKNOX1P55347 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.17□□□□□ -1.74
PKNOX1P55347 RNF19BPX-201ENST00000426224 625 ntBASIC4.17□□□□□ -1.74
PKNOX1P55347 MRPS33P4-201ENST00000434892 317 ntBASIC4.17□□□□□ -1.74
PKNOX1P55347 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.17□□□□□ -1.74
PKNOX1P55347 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.17□□□□□ -1.74
PKNOX1P55347 EIF4A1P11-201ENST00000451239 222 ntBASIC4.17□□□□□ -1.74
PKNOX1P55347 AC021205.1-201ENST00000468797 348 ntBASIC4.17□□□□□ -1.74
PKNOX1P55347 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.17□□□□□ -1.74
PKNOX1P55347 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.17□□□□□ -1.74
PKNOX1P55347 AC010374.1-201ENST00000503762 1237 ntBASIC4.17□□□□□ -1.74
PKNOX1P55347 BNIP3P41-201ENST00000503774 571 ntBASIC4.17□□□□□ -1.74
PKNOX1P55347 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.17□□□□□ -1.74
PKNOX1P55347 FABP5P6-201ENST00000510588 409 ntBASIC4.17□□□□□ -1.74
PKNOX1P55347 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.17□□□□□ -1.74
PKNOX1P55347 AC090281.1-201ENST00000523019 276 ntBASIC4.17□□□□□ -1.74
PKNOX1P55347 AC067805.1-201ENST00000559344 470 ntBASIC4.17□□□□□ -1.74
PKNOX1P55347 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.17□□□□□ -1.74
PKNOX1P55347 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.17□□□□□ -1.74
PKNOX1P55347 AC068020.1-201ENST00000594215 661 ntBASIC4.17□□□□□ -1.74
PKNOX1P55347 AC123786.2-201ENST00000603459 275 ntBASIC4.17□□□□□ -1.74
PKNOX1P55347 AC013244.1-201ENST00000604279 193 ntBASIC4.17□□□□□ -1.74
PKNOX1P55347 AC007390.2-201ENST00000606229 3803 ntBASIC4.17□□□□□ -1.74
PKNOX1P55347 AC012409.3-201ENST00000611343 981 ntBASIC4.17□□□□□ -1.74
PKNOX1P55347 AC009032.1-201ENST00000617574 431 ntBASIC4.17□□□□□ -1.74
PKNOX1P55347 uc_338.13-201ENST00000618243 179 ntBASIC4.17□□□□□ -1.74
PKNOX1P55347 AC020763.5-201ENST00000623298 430 ntBASIC4.17□□□□□ -1.74
PKNOX1P55347 AC008785.1-201ENST00000624475 456 ntBASIC4.17□□□□□ -1.74
PKNOX1P55347 AL356121.2-201ENST00000624715 780 ntBASIC4.17□□□□□ -1.74
PKNOX1P55347 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PKNOX1P55347 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PKNOX1P55347 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PKNOX1P55347 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.17□□□□□ -1.74
PKNOX1P55347 RAD17P1-201ENST00000418130 2042 ntBASIC4.17□□□□□ -1.74
PKNOX1P55347 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms