Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDH6P55285 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CDH6P55285 AL158163.1-201ENST00000603915 1649 ntBASIC4.42□□□□□ -1.7
CDH6P55285 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CDH6P55285 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDH6P55285 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDH6P55285 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CDH6P55285 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
CDH6P55285 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CDH6P55285 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CDH6P55285 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDH6P55285 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CDH6P55285 AL445437.1-201ENST00000623157 3087 ntBASIC4.41□□□□□ -1.7
CDH6P55285 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDH6P55285 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDH6P55285 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDH6P55285 RNA5SP36-201ENST00000410197 133 ntBASIC4.41□□□□□ -1.7
CDH6P55285 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH6P55285 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH6P55285 RPL6P29-201ENST00000414863 865 ntBASIC4.41□□□□□ -1.7
CDH6P55285 GTF2IP2-201ENST00000424290 697 ntBASIC4.41□□□□□ -1.7
CDH6P55285 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CDH6P55285 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH6P55285 MTCYBP29-201ENST00000436327 1006 ntBASIC4.41□□□□□ -1.7
CDH6P55285 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH6P55285 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CDH6P55285 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.41□□□□□ -1.7
CDH6P55285 FGF7P3-201ENST00000454645 303 ntBASIC4.41□□□□□ -1.7
CDH6P55285 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CDH6P55285 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.41□□□□□ -1.7
CDH6P55285 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.41□□□□□ -1.7
CDH6P55285 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH6P55285 IFITM8P-201ENST00000522529 394 ntBASIC4.41□□□□□ -1.7
CDH6P55285 TRAV8-5-201ENST00000537369 341 ntBASIC4.41□□□□□ -1.7
CDH6P55285 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.41□□□□□ -1.7
CDH6P55285 AC124068.1-201ENST00000563131 678 ntBASIC4.41□□□□□ -1.7
CDH6P55285 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.41□□□□□ -1.7
CDH6P55285 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH6P55285 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.41□□□□□ -1.7
CDH6P55285 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CDH6P55285 AC123786.2-201ENST00000603459 275 ntBASIC4.41□□□□□ -1.7
CDH6P55285 MIR432-201ENST00000606207 94 ntBASIC4.41□□□□□ -1.7
CDH6P55285 AC010435.1-201ENST00000623353 1177 ntBASIC4.41□□□□□ -1.7
CDH6P55285 AC138907.10-201ENST00000623708 983 ntBASIC4.41□□□□□ -1.7
CDH6P55285 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.41□□□□□ -1.7
CDH6P55285 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDH6P55285 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CDH6P55285 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.41□□□□□ -1.7
CDH6P55285 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDH6P55285 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDH6P55285 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.41□□□□□ -1.7
CDH6P55285 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CDH6P55285 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
CDH6P55285 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.4□□□□□ -1.7
CDH6P55285 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CDH6P55285 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.4□□□□□ -1.7
CDH6P55285 PHKBP1-201ENST00000450951 1951 ntBASIC4.4□□□□□ -1.7
CDH6P55285 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
CDH6P55285 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
CDH6P55285 AL133243.3-201ENST00000617415 3004 ntBASIC4.4□□□□□ -1.71
CDH6P55285 OR4K17-201ENST00000315543 1032 ntBASIC4.4□□□□□ -1.71
CDH6P55285 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CDH6P55285 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CDH6P55285 SNORA11B-201ENST00000408175 129 ntBASIC4.4□□□□□ -1.71
CDH6P55285 MIR1179-201ENST00000408703 91 ntBASIC4.4□□□□□ -1.71
CDH6P55285 RN7SKP235-201ENST00000410662 305 ntBASIC4.4□□□□□ -1.71
CDH6P55285 AL590806.1-201ENST00000415818 853 ntBASIC4.4□□□□□ -1.71
CDH6P55285 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.4□□□□□ -1.71
CDH6P55285 AC023141.6-201ENST00000429418 337 ntBASIC4.4□□□□□ -1.71
CDH6P55285 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.4□□□□□ -1.71
CDH6P55285 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.4□□□□□ -1.71
CDH6P55285 RPS3AP54-201ENST00000435535 734 ntBASIC4.4□□□□□ -1.71
CDH6P55285 RPL12P46-201ENST00000436610 195 ntBASIC4.4□□□□□ -1.71
CDH6P55285 ELOCP10-201ENST00000440624 327 ntBASIC4.4□□□□□ -1.71
CDH6P55285 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.4□□□□□ -1.71
CDH6P55285 EEF1A1P1-201ENST00000447052 739 ntBASIC4.4□□□□□ -1.71
CDH6P55285 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.4□□□□□ -1.71
CDH6P55285 RPS20P4-201ENST00000461659 355 ntBASIC4.4□□□□□ -1.71
CDH6P55285 RPS29P19-201ENST00000479709 171 ntBASIC4.4□□□□□ -1.71
CDH6P55285 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.4□□□□□ -1.71
CDH6P55285 AC083829.1-201ENST00000503756 657 ntBASIC4.4□□□□□ -1.71
CDH6P55285 AC025674.1-201ENST00000507074 324 ntBASIC4.4□□□□□ -1.71
CDH6P55285 AL592156.1-201ENST00000508758 304 ntBASIC4.4□□□□□ -1.71
CDH6P55285 RNA5SP519-201ENST00000516480 119 ntBASIC4.4□□□□□ -1.71
CDH6P55285 RNA5SP73-201ENST00000516744 108 ntBASIC4.4□□□□□ -1.71
CDH6P55285 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.4□□□□□ -1.71
CDH6P55285 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.4□□□□□ -1.71
CDH6P55285 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.4□□□□□ -1.71
CDH6P55285 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.4□□□□□ -1.71
CDH6P55285 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.4□□□□□ -1.71
CDH6P55285 ELOCP28-201ENST00000590044 317 ntBASIC4.4□□□□□ -1.71
CDH6P55285 ELOCP34-201ENST00000604436 327 ntBASIC4.4□□□□□ -1.71
CDH6P55285 MIR7641-1-201ENST00000627518 61 ntBASIC4.4□□□□□ -1.71
CDH6P55285 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.4□□□□□ -1.71
CDH6P55285 AL451142.2-201ENST00000429076 2090 ntBASIC4.4□□□□□ -1.71
CDH6P55285 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.4□□□□□ -1.71
CDH6P55285 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.4□□□□□ -1.71
CDH6P55285 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CDH6P55285 AC011266.1-201ENST00000624119 3569 ntBASIC4.4□□□□□ -1.71
CDH6P55285 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms