Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
MRE11P49959 MTND4P26-201ENST00000415971 1359 ntBASIC6.09□□□□□ -1.43
MRE11P49959 BX005019.1-201ENST00000561881 1810 ntBASIC6.09□□□□□ -1.43
MRE11P49959 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC6.09□□□□□ -1.43
MRE11P49959 AC132825.1-201ENST00000463573 2247 ntBASIC6.09□□□□□ -1.43
MRE11P49959 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.09□□□□□ -1.43
MRE11P49959 RN7SKP153-201ENST00000365026 316 ntBASIC6.09□□□□□ -1.43
MRE11P49959 AL121978.1-201ENST00000402778 359 ntBASIC6.09□□□□□ -1.43
MRE11P49959 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC6.09□□□□□ -1.43
MRE11P49959 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC6.09□□□□□ -1.43
MRE11P49959 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC6.09□□□□□ -1.43
MRE11P49959 AL353706.1-201ENST00000436728 494 ntBASIC6.09□□□□□ -1.43
MRE11P49959 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC6.09□□□□□ -1.43
MRE11P49959 HMGB3P6-201ENST00000444896 598 ntBASIC6.09□□□□□ -1.43
MRE11P49959 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC6.09□□□□□ -1.43
MRE11P49959 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC6.09□□□□□ -1.43
MRE11P49959 RPS27AP8-201ENST00000452665 445 ntBASIC6.09□□□□□ -1.43
MRE11P49959 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
MRE11P49959 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.09□□□□□ -1.43
MRE11P49959 RN7SL222P-201ENST00000476452 299 ntBASIC6.09□□□□□ -1.43
MRE11P49959 AC083982.1-201ENST00000485679 344 ntBASIC6.09□□□□□ -1.43
MRE11P49959 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC6.09□□□□□ -1.43
MRE11P49959 PRELID3BP7-201ENST00000503606 469 ntBASIC6.09□□□□□ -1.43
MRE11P49959 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC6.09□□□□□ -1.43
MRE11P49959 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC6.09□□□□□ -1.43
MRE11P49959 IGBP1P5-201ENST00000507524 1000 ntBASIC6.09□□□□□ -1.43
MRE11P49959 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC6.09□□□□□ -1.43
MRE11P49959 AC021146.7-201ENST00000509604 775 ntBASIC6.09□□□□□ -1.43
MRE11P49959 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC6.09□□□□□ -1.43
MRE11P49959 SNORA43.3-201ENST00000517240 103 ntBASIC6.09□□□□□ -1.43
MRE11P49959 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC6.09□□□□□ -1.43
MRE11P49959 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC6.09□□□□□ -1.43
MRE11P49959 RFPL1S-203ENST00000539579 330 ntBASIC6.09□□□□□ -1.43
MRE11P49959 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.09□□□□□ -1.43
MRE11P49959 AL121839.1-201ENST00000556233 1185 ntBASIC6.09□□□□□ -1.43
MRE11P49959 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.09□□□□□ -1.43
MRE11P49959 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.09□□□□□ -1.43
MRE11P49959 AC090695.1-201ENST00000561269 1222 ntBASIC6.09□□□□□ -1.43
MRE11P49959 AC135628.1-201ENST00000568867 534 ntBASIC6.09□□□□□ -1.43
MRE11P49959 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC6.09□□□□□ -1.43
MRE11P49959 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC6.09□□□□□ -1.43
MRE11P49959 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC6.09□□□□□ -1.43
MRE11P49959 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC6.09□□□□□ -1.43
MRE11P49959 AC012254.4-201ENST00000588843 273 ntBASIC6.09□□□□□ -1.43
MRE11P49959 AC080078.2-201ENST00000603766 501 ntBASIC6.09□□□□□ -1.43
MRE11P49959 AC087283.1-201ENST00000604029 1074 ntBASIC6.09□□□□□ -1.43
MRE11P49959 AC018695.5-201ENST00000605872 315 ntBASIC6.09□□□□□ -1.43
MRE11P49959 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC6.09□□□□□ -1.43
MRE11P49959 AL136131.3-201ENST00000607600 188 ntBASIC6.09□□□□□ -1.43
MRE11P49959 AC024257.5-201ENST00000612739 531 ntBASIC6.09□□□□□ -1.43
MRE11P49959 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
MRE11P49959 AC109583.2-201ENST00000617367 129 ntBASIC6.09□□□□□ -1.43
MRE11P49959 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.09□□□□□ -1.43
MRE11P49959 AC091953.3-201ENST00000623220 236 ntBASIC6.09□□□□□ -1.43
MRE11P49959 AP003400.3-201ENST00000624904 346 ntBASIC6.09□□□□□ -1.43
MRE11P49959 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
MRE11P49959 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC6.09□□□□□ -1.43
MRE11P49959 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
MRE11P49959 RLIMP2-201ENST00000427891 1563 ntBASIC6.09□□□□□ -1.43
MRE11P49959 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
MRE11P49959 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
MRE11P49959 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC6.09□□□□□ -1.44
MRE11P49959 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
MRE11P49959 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.09□□□□□ -1.44
MRE11P49959 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC6.08□□□□□ -1.44
MRE11P49959 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
MRE11P49959 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
MRE11P49959 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
MRE11P49959 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
MRE11P49959 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
MRE11P49959 IQCB2P-201ENST00000401788 1633 ntBASIC6.08□□□□□ -1.44
MRE11P49959 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
MRE11P49959 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
MRE11P49959 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
MRE11P49959 ANKRD36P1-201ENST00000344424 659 ntBASIC6.08□□□□□ -1.44
MRE11P49959 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
MRE11P49959 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
MRE11P49959 RNU6-83P-201ENST00000384568 112 ntBASIC6.08□□□□□ -1.44
MRE11P49959 AL109941.1-201ENST00000401925 229 ntBASIC6.08□□□□□ -1.44
MRE11P49959 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC6.08□□□□□ -1.44
MRE11P49959 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC6.08□□□□□ -1.44
MRE11P49959 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC6.08□□□□□ -1.44
MRE11P49959 AL390119.1-201ENST00000440329 312 ntBASIC6.08□□□□□ -1.44
MRE11P49959 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC6.08□□□□□ -1.44
MRE11P49959 MTND2P19-201ENST00000449129 1012 ntBASIC6.08□□□□□ -1.44
MRE11P49959 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC6.08□□□□□ -1.44
MRE11P49959 RPL35AP19-201ENST00000469425 329 ntBASIC6.08□□□□□ -1.44
MRE11P49959 RPL32P33-201ENST00000487023 394 ntBASIC6.08□□□□□ -1.44
MRE11P49959 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC6.08□□□□□ -1.44
MRE11P49959 XKRY-201ENST00000510392 1100 ntBASIC6.08□□□□□ -1.44
MRE11P49959 AF213884.2-201ENST00000510417 903 ntBASIC6.08□□□□□ -1.44
MRE11P49959 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC6.08□□□□□ -1.44
MRE11P49959 AC021678.3-201ENST00000517893 476 ntBASIC6.08□□□□□ -1.44
MRE11P49959 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC6.08□□□□□ -1.44
MRE11P49959 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.08□□□□□ -1.44
MRE11P49959 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
MRE11P49959 AC006518.2-201ENST00000542513 940 ntBASIC6.08□□□□□ -1.44
MRE11P49959 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC6.08□□□□□ -1.44
MRE11P49959 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC6.08□□□□□ -1.44
MRE11P49959 AP002906.1-201ENST00000603405 233 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 149.7 ms