Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC4.64□□□□□ -1.67
SOX2P48431 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.64□□□□□ -1.67
SOX2P48431 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.64□□□□□ -1.67
SOX2P48431 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.64□□□□□ -1.67
SOX2P48431 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
SOX2P48431 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.64□□□□□ -1.67
SOX2P48431 AC011626.1-201ENST00000604710 562 ntBASIC4.64□□□□□ -1.67
SOX2P48431 AC004223.4-201ENST00000612426 332 ntBASIC4.64□□□□□ -1.67
SOX2P48431 MIR6889-201ENST00000613185 59 ntBASIC4.64□□□□□ -1.67
SOX2P48431 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
SOX2P48431 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SOX2P48431 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.64□□□□□ -1.67
SOX2P48431 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.64□□□□□ -1.67
SOX2P48431 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.64□□□□□ -1.67
SOX2P48431 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.64□□□□□ -1.67
SOX2P48431 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SOX2P48431 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
SOX2P48431 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
SOX2P48431 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.64□□□□□ -1.67
SOX2P48431 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
SOX2P48431 AL731532.2-201ENST00000623542 1953 ntBASIC4.64□□□□□ -1.67
SOX2P48431 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SOX2P48431 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SOX2P48431 AC100778.3-201ENST00000580060 1750 ntBASIC4.63□□□□□ -1.67
SOX2P48431 AC023421.1-201ENST00000590535 1785 ntBASIC4.63□□□□□ -1.67
SOX2P48431 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC4.63□□□□□ -1.67
SOX2P48431 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SOX2P48431 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SOX2P48431 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SOX2P48431 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SOX2P48431 AC027228.2-201ENST00000567141 2154 ntBASIC4.63□□□□□ -1.67
SOX2P48431 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SOX2P48431 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.63□□□□□ -1.67
SOX2P48431 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SOX2P48431 Y_RNA.77-201ENST00000362962 107 ntBASIC4.63□□□□□ -1.67
SOX2P48431 RNU6-839P-201ENST00000363347 108 ntBASIC4.63□□□□□ -1.67
SOX2P48431 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.63□□□□□ -1.67
SOX2P48431 MIR217-201ENST00000384817 110 ntBASIC4.63□□□□□ -1.67
SOX2P48431 MIR589-201ENST00000385238 99 ntBASIC4.63□□□□□ -1.67
SOX2P48431 AL161909.1-201ENST00000397390 712 ntBASIC4.63□□□□□ -1.67
SOX2P48431 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.63□□□□□ -1.67
SOX2P48431 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC4.63□□□□□ -1.67
SOX2P48431 AL450992.3-201ENST00000413192 568 ntBASIC4.63□□□□□ -1.67
SOX2P48431 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.63□□□□□ -1.67
SOX2P48431 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.63□□□□□ -1.67
SOX2P48431 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.63□□□□□ -1.67
SOX2P48431 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.63□□□□□ -1.67
SOX2P48431 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.63□□□□□ -1.67
SOX2P48431 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.63□□□□□ -1.67
SOX2P48431 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.63□□□□□ -1.67
SOX2P48431 Z93242.1-201ENST00000427102 353 ntBASIC4.63□□□□□ -1.67
SOX2P48431 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC4.63□□□□□ -1.67
SOX2P48431 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.63□□□□□ -1.67
SOX2P48431 ATP5C1P1-201ENST00000441945 895 ntBASIC4.63□□□□□ -1.67
SOX2P48431 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.63□□□□□ -1.67
SOX2P48431 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.63□□□□□ -1.67
SOX2P48431 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC4.63□□□□□ -1.67
SOX2P48431 NOP56P2-201ENST00000447491 769 ntBASIC4.63□□□□□ -1.67
SOX2P48431 AL034418.1-201ENST00000448675 860 ntBASIC4.63□□□□□ -1.67
SOX2P48431 COX6CP18-201ENST00000448769 222 ntBASIC4.63□□□□□ -1.67
SOX2P48431 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC4.63□□□□□ -1.67
SOX2P48431 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.63□□□□□ -1.67
SOX2P48431 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.63□□□□□ -1.67
SOX2P48431 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC4.63□□□□□ -1.67
SOX2P48431 RPL30P6-201ENST00000475925 342 ntBASIC4.63□□□□□ -1.67
SOX2P48431 AC015724.1-201ENST00000478577 156 ntBASIC4.63□□□□□ -1.67
SOX2P48431 AC058823.1-201ENST00000485315 474 ntBASIC4.63□□□□□ -1.67
SOX2P48431 RN7SL814P-201ENST00000487715 300 ntBASIC4.63□□□□□ -1.67
SOX2P48431 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.63□□□□□ -1.67
SOX2P48431 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.63□□□□□ -1.67
SOX2P48431 AC048346.1-201ENST00000510247 144 ntBASIC4.63□□□□□ -1.67
SOX2P48431 AC010285.3-201ENST00000511668 676 ntBASIC4.63□□□□□ -1.67
SOX2P48431 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.63□□□□□ -1.67
SOX2P48431 MTND5P13-201ENST00000513046 1079 ntBASIC4.63□□□□□ -1.67
SOX2P48431 MTATP6P1-201ENST00000514057 681 ntBASIC4.63□□□□□ -1.67
SOX2P48431 RFPL4AP5-201ENST00000514977 504 ntBASIC4.63□□□□□ -1.67
SOX2P48431 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.63□□□□□ -1.67
SOX2P48431 AC060775.1-201ENST00000518241 520 ntBASIC4.63□□□□□ -1.67
SOX2P48431 IGLVIV-64-201ENST00000518581 301 ntBASIC4.63□□□□□ -1.67
SOX2P48431 AC008562.1-201ENST00000521763 330 ntBASIC4.63□□□□□ -1.67
SOX2P48431 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.63□□□□□ -1.67
SOX2P48431 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.63□□□□□ -1.67
SOX2P48431 AC023161.2-201ENST00000551218 780 ntBASIC4.63□□□□□ -1.67
SOX2P48431 GTF2IP8-201ENST00000560687 584 ntBASIC4.63□□□□□ -1.67
SOX2P48431 AC005951.1-201ENST00000576706 485 ntBASIC4.63□□□□□ -1.67
SOX2P48431 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.63□□□□□ -1.67
SOX2P48431 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.63□□□□□ -1.67
SOX2P48431 VN1R90P-201ENST00000595717 726 ntBASIC4.63□□□□□ -1.67
SOX2P48431 AL390816.3-201ENST00000604527 1066 ntBASIC4.63□□□□□ -1.67
SOX2P48431 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.63□□□□□ -1.67
SOX2P48431 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.63□□□□□ -1.67
SOX2P48431 Z69908.1-201ENST00000622603 247 ntBASIC4.63□□□□□ -1.67
SOX2P48431 AC091965.5-201ENST00000624785 342 ntBASIC4.63□□□□□ -1.67
SOX2P48431 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.63□□□□□ -1.67
SOX2P48431 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC4.63□□□□□ -1.67
SOX2P48431 AC129915.3-201ENST00000634128 948 ntBASIC4.63□□□□□ -1.67
SOX2P48431 FP325313.1-201ENST00000638228 703 ntBASIC4.63□□□□□ -1.67
SOX2P48431 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.63□□□□□ -1.67
SOX2P48431 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SOX2P48431 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms