Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 RPL21P108-201ENST00000413857 481 ntBASIC4.12□□□□□ -1.75
CDX1P47902 EIF4EP1-201ENST00000422311 642 ntBASIC4.12□□□□□ -1.75
CDX1P47902 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.12□□□□□ -1.75
CDX1P47902 MTCYBP15-201ENST00000433123 1127 ntBASIC4.12□□□□□ -1.75
CDX1P47902 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.12□□□□□ -1.75
CDX1P47902 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDX1P47902 MRPL35P2-201ENST00000448009 511 ntBASIC4.12□□□□□ -1.75
CDX1P47902 AURKAPS1-201ENST00000451805 1212 ntBASIC4.12□□□□□ -1.75
CDX1P47902 AL035090.1-201ENST00000454835 332 ntBASIC4.12□□□□□ -1.75
CDX1P47902 Z92846.1-201ENST00000456203 268 ntBASIC4.12□□□□□ -1.75
CDX1P47902 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC4.12□□□□□ -1.75
CDX1P47902 NAP1L1P3-201ENST00000462291 880 ntBASIC4.12□□□□□ -1.75
CDX1P47902 AC010469.1-201ENST00000463864 576 ntBASIC4.12□□□□□ -1.75
CDX1P47902 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.12□□□□□ -1.75
CDX1P47902 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CDX1P47902 AC104982.1-201ENST00000478775 574 ntBASIC4.12□□□□□ -1.75
CDX1P47902 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.12□□□□□ -1.75
CDX1P47902 RPS24P16-201ENST00000497294 392 ntBASIC4.12□□□□□ -1.75
CDX1P47902 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CDX1P47902 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CDX1P47902 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.12□□□□□ -1.75
CDX1P47902 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CDX1P47902 OR5M14P-201ENST00000506803 618 ntBASIC4.12□□□□□ -1.75
CDX1P47902 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.12□□□□□ -1.75
CDX1P47902 AC147055.3-201ENST00000510547 851 ntBASIC4.12□□□□□ -1.75
CDX1P47902 GTF2F2P1-201ENST00000511083 675 ntBASIC4.12□□□□□ -1.75
CDX1P47902 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CDX1P47902 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CDX1P47902 SCARNA20.4-201ENST00000516969 131 ntBASIC4.12□□□□□ -1.75
CDX1P47902 MYL12AP1-201ENST00000518490 515 ntBASIC4.12□□□□□ -1.75
CDX1P47902 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.12□□□□□ -1.75
CDX1P47902 AC104417.1-201ENST00000523974 751 ntBASIC4.12□□□□□ -1.75
CDX1P47902 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.12□□□□□ -1.75
CDX1P47902 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.12□□□□□ -1.75
CDX1P47902 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CDX1P47902 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.12□□□□□ -1.75
CDX1P47902 HNRNPCP4-201ENST00000571636 900 ntBASIC4.12□□□□□ -1.75
CDX1P47902 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CDX1P47902 BPTFP1-201ENST00000579209 492 ntBASIC4.12□□□□□ -1.75
CDX1P47902 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.12□□□□□ -1.75
CDX1P47902 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.12□□□□□ -1.75
CDX1P47902 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.12□□□□□ -1.75
CDX1P47902 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.12□□□□□ -1.75
CDX1P47902 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.12□□□□□ -1.75
CDX1P47902 AC144521.1-201ENST00000607148 956 ntBASIC4.12□□□□□ -1.75
CDX1P47902 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDX1P47902 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CDX1P47902 AC000123.2-201ENST00000623124 461 ntBASIC4.12□□□□□ -1.75
CDX1P47902 CYP4F35P-202ENST00000636121 390 ntBASIC4.12□□□□□ -1.75
CDX1P47902 AL445984.1-201ENST00000637834 659 ntBASIC4.12□□□□□ -1.75
CDX1P47902 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.12□□□□□ -1.75
CDX1P47902 AC109780.1-201ENST00000451768 1344 ntBASIC4.12□□□□□ -1.75
CDX1P47902 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDX1P47902 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.12□□□□□ -1.75
CDX1P47902 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDX1P47902 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CDX1P47902 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.12□□□□□ -1.75
CDX1P47902 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
CDX1P47902 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDX1P47902 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CDX1P47902 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.12□□□□□ -1.75
CDX1P47902 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDX1P47902 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDX1P47902 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.11□□□□□ -1.75
CDX1P47902 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CDX1P47902 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.11□□□□□ -1.75
CDX1P47902 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.11□□□□□ -1.75
CDX1P47902 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDX1P47902 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CDX1P47902 XPOTP1-201ENST00000443317 2398 ntBASIC4.11□□□□□ -1.75
CDX1P47902 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CDX1P47902 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDX1P47902 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.11□□□□□ -1.75
CDX1P47902 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDX1P47902 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.11□□□□□ -1.75
CDX1P47902 U3.2-201ENST00000362981 210 ntBASIC4.11□□□□□ -1.75
CDX1P47902 SNORA74A-201ENST00000364089 198 ntBASIC4.11□□□□□ -1.75
CDX1P47902 MIR765-201ENST00000390226 114 ntBASIC4.11□□□□□ -1.75
CDX1P47902 OR4K12P-201ENST00000406538 961 ntBASIC4.11□□□□□ -1.75
CDX1P47902 DUTP5-201ENST00000406790 469 ntBASIC4.11□□□□□ -1.75
CDX1P47902 RN7SKP213-201ENST00000410746 298 ntBASIC4.11□□□□□ -1.75
CDX1P47902 RN7SKP273-201ENST00000411392 314 ntBASIC4.11□□□□□ -1.75
CDX1P47902 RPL23AP27-201ENST00000415161 451 ntBASIC4.11□□□□□ -1.75
CDX1P47902 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.11□□□□□ -1.75
CDX1P47902 PAICSP7-201ENST00000419829 962 ntBASIC4.11□□□□□ -1.75
CDX1P47902 TCEA1P2-201ENST00000420496 906 ntBASIC4.11□□□□□ -1.75
CDX1P47902 AC090018.1-201ENST00000434369 367 ntBASIC4.11□□□□□ -1.75
CDX1P47902 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.11□□□□□ -1.75
CDX1P47902 CEACAMP7-201ENST00000444105 496 ntBASIC4.11□□□□□ -1.75
CDX1P47902 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.11□□□□□ -1.75
CDX1P47902 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.11□□□□□ -1.75
CDX1P47902 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.11□□□□□ -1.75
CDX1P47902 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.11□□□□□ -1.75
CDX1P47902 DNAJB5P1-201ENST00000454004 806 ntBASIC4.11□□□□□ -1.75
CDX1P47902 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.11□□□□□ -1.75
CDX1P47902 PRDX3P4-201ENST00000470828 747 ntBASIC4.11□□□□□ -1.75
CDX1P47902 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.11□□□□□ -1.75
CDX1P47902 AC004815.1-201ENST00000484185 331 ntBASIC4.11□□□□□ -1.75
CDX1P47902 AC058823.1-201ENST00000485315 474 ntBASIC4.11□□□□□ -1.75
CDX1P47902 RPS27P23-201ENST00000487608 251 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms