Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AP000936.3-201ENST00000438127 255 ntBASIC4.99□□□□□ -1.61
PTPN9P43378 AC004938.1-201ENST00000438468 308 ntBASIC4.99□□□□□ -1.61
PTPN9P43378 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.99□□□□□ -1.61
PTPN9P43378 OR10R1P-201ENST00000441524 1141 ntBASIC4.99□□□□□ -1.61
PTPN9P43378 ARL5AP2-201ENST00000444698 533 ntBASIC4.99□□□□□ -1.61
PTPN9P43378 RPL31P44-201ENST00000447680 377 ntBASIC4.99□□□□□ -1.61
PTPN9P43378 RPL7L1P1-201ENST00000448259 785 ntBASIC4.99□□□□□ -1.61
PTPN9P43378 MTND2P8-201ENST00000450555 1025 ntBASIC4.99□□□□□ -1.61
PTPN9P43378 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC4.99□□□□□ -1.61
PTPN9P43378 AC104971.1-201ENST00000495117 578 ntBASIC4.99□□□□□ -1.61
PTPN9P43378 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.99□□□□□ -1.61
PTPN9P43378 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.99□□□□□ -1.61
PTPN9P43378 NDUFB5P1-201ENST00000508134 564 ntBASIC4.99□□□□□ -1.61
PTPN9P43378 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC4.99□□□□□ -1.61
PTPN9P43378 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.99□□□□□ -1.61
PTPN9P43378 AC093752.1-206ENST00000511823 336 ntBASIC4.99□□□□□ -1.61
PTPN9P43378 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.99□□□□□ -1.61
PTPN9P43378 RNU1-6P-201ENST00000516290 144 ntBASIC4.99□□□□□ -1.61
PTPN9P43378 EEF1A1P37-201ENST00000522748 715 ntBASIC4.99□□□□□ -1.61
PTPN9P43378 AC083923.1-201ENST00000523708 376 ntBASIC4.99□□□□□ -1.61
PTPN9P43378 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.99□□□□□ -1.61
PTPN9P43378 AP002812.4-201ENST00000532139 286 ntBASIC4.99□□□□□ -1.61
PTPN9P43378 AC006518.2-201ENST00000542513 940 ntBASIC4.99□□□□□ -1.61
PTPN9P43378 AC125612.1-201ENST00000547580 377 ntBASIC4.99□□□□□ -1.61
PTPN9P43378 AC133555.2-201ENST00000550213 292 ntBASIC4.99□□□□□ -1.61
PTPN9P43378 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.99□□□□□ -1.61
PTPN9P43378 FKBP1BP1-201ENST00000553366 325 ntBASIC4.99□□□□□ -1.61
PTPN9P43378 AC051619.2-201ENST00000559063 397 ntBASIC4.99□□□□□ -1.61
PTPN9P43378 AC087477.6-201ENST00000559595 843 ntBASIC4.99□□□□□ -1.61
PTPN9P43378 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.99□□□□□ -1.61
PTPN9P43378 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.99□□□□□ -1.61
PTPN9P43378 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.99□□□□□ -1.61
PTPN9P43378 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.99□□□□□ -1.61
PTPN9P43378 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.99□□□□□ -1.61
PTPN9P43378 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.99□□□□□ -1.61
PTPN9P43378 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PTPN9P43378 CLIC4P2-201ENST00000601934 717 ntBASIC4.99□□□□□ -1.61
PTPN9P43378 AC005084.1-201ENST00000605160 304 ntBASIC4.99□□□□□ -1.61
PTPN9P43378 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PTPN9P43378 PART1_2.1-201ENST00000612397 250 ntBASIC4.99□□□□□ -1.61
PTPN9P43378 MIR7973-1-201ENST00000614683 76 ntBASIC4.99□□□□□ -1.61
PTPN9P43378 AC140725.3-201ENST00000616193 880 ntBASIC4.99□□□□□ -1.61
PTPN9P43378 MIR8069-1-201ENST00000616627 86 ntBASIC4.99□□□□□ -1.61
PTPN9P43378 AC090510.2-201ENST00000617465 629 ntBASIC4.99□□□□□ -1.61
PTPN9P43378 MIR8069-2-201ENST00000621412 86 ntBASIC4.99□□□□□ -1.61
PTPN9P43378 AC004232.3-201ENST00000622977 525 ntBASIC4.99□□□□□ -1.61
PTPN9P43378 AC006963.1-201ENST00000624003 1052 ntBASIC4.99□□□□□ -1.61
PTPN9P43378 CASC19-222ENST00000641321 1173 ntBASIC4.99□□□□□ -1.61
PTPN9P43378 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
PTPN9P43378 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PTPN9P43378 AC131971.1-201ENST00000332881 1482 ntBASIC4.99□□□□□ -1.61
PTPN9P43378 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
PTPN9P43378 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.99□□□□□ -1.61
PTPN9P43378 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PTPN9P43378 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PTPN9P43378 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PTPN9P43378 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
PTPN9P43378 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.98□□□□□ -1.61
PTPN9P43378 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PTPN9P43378 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
PTPN9P43378 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PTPN9P43378 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PTPN9P43378 SNORA62.2-201ENST00000364672 152 ntBASIC4.98□□□□□ -1.61
PTPN9P43378 RNA5SP113-201ENST00000410486 84 ntBASIC4.98□□□□□ -1.61
PTPN9P43378 RPL36AP10-201ENST00000421785 322 ntBASIC4.98□□□□□ -1.61
PTPN9P43378 RPL7P57-201ENST00000423238 740 ntBASIC4.98□□□□□ -1.61
PTPN9P43378 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PTPN9P43378 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.98□□□□□ -1.61
PTPN9P43378 MTATP6P17-201ENST00000431030 672 ntBASIC4.98□□□□□ -1.61
PTPN9P43378 GTF2IP3-201ENST00000433887 494 ntBASIC4.98□□□□□ -1.61
PTPN9P43378 MTND2P2-201ENST00000434633 945 ntBASIC4.98□□□□□ -1.61
PTPN9P43378 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.98□□□□□ -1.61
PTPN9P43378 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PTPN9P43378 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
PTPN9P43378 AC010733.1-201ENST00000451515 401 ntBASIC4.98□□□□□ -1.61
PTPN9P43378 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.98□□□□□ -1.61
PTPN9P43378 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.98□□□□□ -1.61
PTPN9P43378 RPS6P2-201ENST00000454208 705 ntBASIC4.98□□□□□ -1.61
PTPN9P43378 RNA5SP103-201ENST00000459503 118 ntBASIC4.98□□□□□ -1.61
PTPN9P43378 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.98□□□□□ -1.61
PTPN9P43378 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PTPN9P43378 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.98□□□□□ -1.61
PTPN9P43378 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.98□□□□□ -1.61
PTPN9P43378 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.98□□□□□ -1.61
PTPN9P43378 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.98□□□□□ -1.61
PTPN9P43378 AP001922.4-201ENST00000526967 290 ntBASIC4.98□□□□□ -1.61
PTPN9P43378 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.98□□□□□ -1.61
PTPN9P43378 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.98□□□□□ -1.61
PTPN9P43378 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.98□□□□□ -1.61
PTPN9P43378 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.98□□□□□ -1.61
PTPN9P43378 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.98□□□□□ -1.61
PTPN9P43378 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.98□□□□□ -1.61
PTPN9P43378 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.98□□□□□ -1.61
PTPN9P43378 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.98□□□□□ -1.61
PTPN9P43378 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
PTPN9P43378 HSPA8P17-201ENST00000427029 1382 ntBASIC4.98□□□□□ -1.61
PTPN9P43378 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
PTPN9P43378 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PTPN9P43378 NSRP1P1-201ENST00000444067 1693 ntBASIC4.98□□□□□ -1.61
PTPN9P43378 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms