Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.49□□□□□ -1.69
TRIM23P36406 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.49□□□□□ -1.69
TRIM23P36406 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
TRIM23P36406 AC023762.1-201ENST00000603280 584 ntBASIC4.49□□□□□ -1.69
TRIM23P36406 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC4.49□□□□□ -1.69
TRIM23P36406 AL121873.1-201ENST00000616013 524 ntBASIC4.49□□□□□ -1.69
TRIM23P36406 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
TRIM23P36406 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM23P36406 AL355852.1-201ENST00000454081 1771 ntBASIC4.49□□□□□ -1.69
TRIM23P36406 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM23P36406 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM23P36406 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM23P36406 AC010329.2-201ENST00000595195 2737 ntBASIC4.49□□□□□ -1.69
TRIM23P36406 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM23P36406 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM23P36406 LINC00622-201ENST00000562811 1570 ntBASIC4.48□□□□□ -1.69
TRIM23P36406 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM23P36406 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM23P36406 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.48□□□□□ -1.69
TRIM23P36406 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM23P36406 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.48□□□□□ -1.69
TRIM23P36406 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.48□□□□□ -1.69
TRIM23P36406 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
TRIM23P36406 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM23P36406 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.48□□□□□ -1.69
TRIM23P36406 RAB28P1-201ENST00000411517 641 ntBASIC4.48□□□□□ -1.69
TRIM23P36406 AC009237.10-201ENST00000414112 510 ntBASIC4.48□□□□□ -1.69
TRIM23P36406 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.48□□□□□ -1.69
TRIM23P36406 FAR1P1-201ENST00000427163 934 ntBASIC4.48□□□□□ -1.69
TRIM23P36406 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.48□□□□□ -1.69
TRIM23P36406 ARL4AP4-201ENST00000434170 518 ntBASIC4.48□□□□□ -1.69
TRIM23P36406 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM23P36406 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM23P36406 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM23P36406 AC069285.2-201ENST00000440210 275 ntBASIC4.48□□□□□ -1.69
TRIM23P36406 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM23P36406 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.48□□□□□ -1.69
TRIM23P36406 CYCSP34-201ENST00000458172 304 ntBASIC4.48□□□□□ -1.69
TRIM23P36406 AC112206.1-201ENST00000468416 477 ntBASIC4.48□□□□□ -1.69
TRIM23P36406 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM23P36406 HMGB1P3-201ENST00000502802 616 ntBASIC4.48□□□□□ -1.69
TRIM23P36406 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.48□□□□□ -1.69
TRIM23P36406 HPRT1P1-201ENST00000509498 657 ntBASIC4.48□□□□□ -1.69
TRIM23P36406 AC015795.1-201ENST00000513669 327 ntBASIC4.48□□□□□ -1.69
TRIM23P36406 RNU6-1308P-201ENST00000516817 103 ntBASIC4.48□□□□□ -1.69
TRIM23P36406 HIGD1AP18-201ENST00000520730 278 ntBASIC4.48□□□□□ -1.69
TRIM23P36406 OR8G5-201ENST00000524943 1041 ntBASIC4.48□□□□□ -1.69
TRIM23P36406 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.48□□□□□ -1.69
TRIM23P36406 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM23P36406 AC068714.1-201ENST00000559623 800 ntBASIC4.48□□□□□ -1.69
TRIM23P36406 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.48□□□□□ -1.69
TRIM23P36406 ADAD1P2-201ENST00000588476 646 ntBASIC4.48□□□□□ -1.69
TRIM23P36406 AC242628.1-201ENST00000606810 391 ntBASIC4.48□□□□□ -1.69
TRIM23P36406 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM23P36406 RMST_9.1-201ENST00000619945 193 ntBASIC4.48□□□□□ -1.69
TRIM23P36406 LINC01808-202ENST00000641680 1116 ntBASIC4.48□□□□□ -1.69
TRIM23P36406 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM23P36406 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM23P36406 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.47□□□□□ -1.69
TRIM23P36406 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRIM23P36406 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.47□□□□□ -1.69
TRIM23P36406 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
TRIM23P36406 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.47□□□□□ -1.69
TRIM23P36406 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.47□□□□□ -1.69
TRIM23P36406 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
TRIM23P36406 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.47□□□□□ -1.69
TRIM23P36406 AC093311.1-201ENST00000506586 2021 ntBASIC4.47□□□□□ -1.69
TRIM23P36406 IL6STP1-201ENST00000346911 1020 ntBASIC4.47□□□□□ -1.69
TRIM23P36406 SNORD51.1-201ENST00000365405 77 ntBASIC4.47□□□□□ -1.69
TRIM23P36406 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
TRIM23P36406 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.47□□□□□ -1.69
TRIM23P36406 RNA5SP498-201ENST00000411342 120 ntBASIC4.47□□□□□ -1.69
TRIM23P36406 RANP4-201ENST00000413361 655 ntBASIC4.47□□□□□ -1.69
TRIM23P36406 AC048351.1-201ENST00000420064 602 ntBASIC4.47□□□□□ -1.69
TRIM23P36406 MTCO3P21-201ENST00000430791 643 ntBASIC4.47□□□□□ -1.69
TRIM23P36406 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.47□□□□□ -1.69
TRIM23P36406 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.47□□□□□ -1.69
TRIM23P36406 RNU7-27P-201ENST00000459281 62 ntBASIC4.47□□□□□ -1.69
TRIM23P36406 RPS23P7-201ENST00000466210 444 ntBASIC4.47□□□□□ -1.69
TRIM23P36406 AC053481.1-201ENST00000467217 306 ntBASIC4.47□□□□□ -1.69
TRIM23P36406 METTL15P1-201ENST00000481421 1045 ntBASIC4.47□□□□□ -1.69
TRIM23P36406 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.47□□□□□ -1.69
TRIM23P36406 SS18L2P2-201ENST00000583960 235 ntBASIC4.47□□□□□ -1.69
TRIM23P36406 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC4.47□□□□□ -1.69
TRIM23P36406 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.47□□□□□ -1.69
TRIM23P36406 AC040174.2-201ENST00000602701 465 ntBASIC4.47□□□□□ -1.69
TRIM23P36406 BPIFA4P-203ENST00000603168 689 ntBASIC4.47□□□□□ -1.69
TRIM23P36406 AC123786.2-201ENST00000603459 275 ntBASIC4.47□□□□□ -1.69
TRIM23P36406 AC090948.1-201ENST00000607464 549 ntBASIC4.47□□□□□ -1.69
TRIM23P36406 OR6R2P-201ENST00000609216 300 ntBASIC4.47□□□□□ -1.69
TRIM23P36406 AL391834.1-201ENST00000609609 560 ntBASIC4.47□□□□□ -1.69
TRIM23P36406 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.47□□□□□ -1.69
TRIM23P36406 AC083809.1-201ENST00000615051 472 ntBASIC4.47□□□□□ -1.69
TRIM23P36406 SNX18P1Y-201ENST00000616231 511 ntBASIC4.47□□□□□ -1.69
TRIM23P36406 HPVC1-201ENST00000629899 1198 ntBASIC4.47□□□□□ -1.69
TRIM23P36406 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
TRIM23P36406 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRIM23P36406 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
TRIM23P36406 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.47□□□□□ -1.69
TRIM23P36406 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms