Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RPA3P35244 AF228730.2-201ENST00000438784 848 ntBASIC4.17□□□□□ -1.74
RPA3P35244 AL356535.1-201ENST00000440335 398 ntBASIC4.17□□□□□ -1.74
RPA3P35244 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.17□□□□□ -1.74
RPA3P35244 EIF2S2P2-201ENST00000447161 982 ntBASIC4.17□□□□□ -1.74
RPA3P35244 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.17□□□□□ -1.74
RPA3P35244 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.17□□□□□ -1.74
RPA3P35244 RPL23AP81-201ENST00000455252 467 ntBASIC4.17□□□□□ -1.74
RPA3P35244 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.17□□□□□ -1.74
RPA3P35244 RN7SL303P-201ENST00000469773 251 ntBASIC4.17□□□□□ -1.74
RPA3P35244 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.17□□□□□ -1.74
RPA3P35244 RPS29P19-201ENST00000479709 171 ntBASIC4.17□□□□□ -1.74
RPA3P35244 AC069499.1-201ENST00000489433 509 ntBASIC4.17□□□□□ -1.74
RPA3P35244 PGBD4P4-201ENST00000509673 613 ntBASIC4.17□□□□□ -1.74
RPA3P35244 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.17□□□□□ -1.74
RPA3P35244 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.17□□□□□ -1.74
RPA3P35244 AC034205.1-201ENST00000520621 638 ntBASIC4.17□□□□□ -1.74
RPA3P35244 C1GALT1P3-201ENST00000522049 819 ntBASIC4.17□□□□□ -1.74
RPA3P35244 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC4.17□□□□□ -1.74
RPA3P35244 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RPA3P35244 DYNLL1P4-201ENST00000549314 266 ntBASIC4.17□□□□□ -1.74
RPA3P35244 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RPA3P35244 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.17□□□□□ -1.74
RPA3P35244 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC4.17□□□□□ -1.74
RPA3P35244 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.17□□□□□ -1.74
RPA3P35244 AC023813.4-201ENST00000607580 580 ntBASIC4.17□□□□□ -1.74
RPA3P35244 AC128687.2-201ENST00000609657 566 ntBASIC4.17□□□□□ -1.74
RPA3P35244 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.17□□□□□ -1.74
RPA3P35244 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RPA3P35244 AL121890.3-201ENST00000618494 516 ntBASIC4.17□□□□□ -1.74
RPA3P35244 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.17□□□□□ -1.74
RPA3P35244 AL356121.2-201ENST00000624715 780 ntBASIC4.17□□□□□ -1.74
RPA3P35244 AL139254.3-201ENST00000641097 674 ntBASIC4.17□□□□□ -1.74
RPA3P35244 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.17□□□□□ -1.74
RPA3P35244 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RPA3P35244 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
RPA3P35244 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.17□□□□□ -1.74
RPA3P35244 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
RPA3P35244 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RPA3P35244 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.17□□□□□ -1.74
RPA3P35244 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RPA3P35244 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RPA3P35244 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RPA3P35244 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RPA3P35244 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RPA3P35244 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RPA3P35244 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.16□□□□□ -1.74
RPA3P35244 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RPA3P35244 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
RPA3P35244 AL035696.2-201ENST00000407941 709 ntBASIC4.16□□□□□ -1.74
RPA3P35244 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.16□□□□□ -1.74
RPA3P35244 P2RY10P2-201ENST00000416730 913 ntBASIC4.16□□□□□ -1.74
RPA3P35244 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.16□□□□□ -1.74
RPA3P35244 AC073143.1-201ENST00000436316 395 ntBASIC4.16□□□□□ -1.74
RPA3P35244 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.16□□□□□ -1.74
RPA3P35244 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RPA3P35244 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.16□□□□□ -1.74
RPA3P35244 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.16□□□□□ -1.74
RPA3P35244 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.16□□□□□ -1.74
RPA3P35244 AL121877.1-201ENST00000453704 622 ntBASIC4.16□□□□□ -1.74
RPA3P35244 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.16□□□□□ -1.74
RPA3P35244 RPS20P4-201ENST00000461659 355 ntBASIC4.16□□□□□ -1.74
RPA3P35244 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.16□□□□□ -1.74
RPA3P35244 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.16□□□□□ -1.74
RPA3P35244 AC025674.1-201ENST00000507074 324 ntBASIC4.16□□□□□ -1.74
RPA3P35244 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.16□□□□□ -1.74
RPA3P35244 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.16□□□□□ -1.74
RPA3P35244 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
RPA3P35244 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.16□□□□□ -1.74
RPA3P35244 FAM106CP-201ENST00000582212 507 ntBASIC4.16□□□□□ -1.74
RPA3P35244 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.16□□□□□ -1.74
RPA3P35244 AC020914.4-201ENST00000597690 277 ntBASIC4.16□□□□□ -1.74
RPA3P35244 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.16□□□□□ -1.74
RPA3P35244 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.16□□□□□ -1.74
RPA3P35244 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RPA3P35244 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
RPA3P35244 AL158163.1-201ENST00000603915 1649 ntBASIC4.16□□□□□ -1.74
RPA3P35244 AC092162.3-201ENST00000624511 1624 ntBASIC4.16□□□□□ -1.74
RPA3P35244 FAM35DP-201ENST00000323387 2712 ntBASIC4.15□□□□□ -1.74
RPA3P35244 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
RPA3P35244 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.74
RPA3P35244 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.15□□□□□ -1.74
RPA3P35244 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
RPA3P35244 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
RPA3P35244 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.15□□□□□ -1.74
RPA3P35244 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.15□□□□□ -1.74
RPA3P35244 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.74
RPA3P35244 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
RPA3P35244 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
RPA3P35244 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.15□□□□□ -1.74
RPA3P35244 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.15□□□□□ -1.75
RPA3P35244 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
RPA3P35244 RNA5SP322-201ENST00000363617 119 ntBASIC4.15□□□□□ -1.75
RPA3P35244 RNU1-89P-201ENST00000384592 164 ntBASIC4.15□□□□□ -1.75
RPA3P35244 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
RPA3P35244 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.15□□□□□ -1.75
RPA3P35244 RNU4-25P-201ENST00000410569 230 ntBASIC4.15□□□□□ -1.75
RPA3P35244 RPL6P29-201ENST00000414863 865 ntBASIC4.15□□□□□ -1.75
RPA3P35244 MFSD13B-201ENST00000420133 1290 ntBASIC4.15□□□□□ -1.75
RPA3P35244 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms