Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AC134698.4-201ENST00000523451 826 ntBASIC5.53□□□□□ -1.52
POLR2AP24928 AC004492.1-201ENST00000607036 742 ntBASIC5.53□□□□□ -1.52
POLR2AP24928 AC090948.2-201ENST00000607363 564 ntBASIC5.53□□□□□ -1.52
POLR2AP24928 AC092354.2-201ENST00000607786 514 ntBASIC5.53□□□□□ -1.52
POLR2AP24928 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC5.53□□□□□ -1.52
POLR2AP24928 AL031667.3-201ENST00000620124 655 ntBASIC5.53□□□□□ -1.52
POLR2AP24928 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
POLR2AP24928 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
POLR2AP24928 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
POLR2AP24928 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
POLR2AP24928 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
POLR2AP24928 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.52□□□□□ -1.53
POLR2AP24928 ZNF137P-201ENST00000456718 1920 ntBASIC5.52□□□□□ -1.53
POLR2AP24928 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
POLR2AP24928 CGA-201ENST00000369582 729 ntTSL 5 BASIC5.52□□□□□ -1.53
POLR2AP24928 Y_RNA.604-201ENST00000410574 102 ntBASIC5.52□□□□□ -1.53
POLR2AP24928 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.52□□□□□ -1.53
POLR2AP24928 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC5.52□□□□□ -1.53
POLR2AP24928 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC5.52□□□□□ -1.53
POLR2AP24928 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC5.52□□□□□ -1.53
POLR2AP24928 MRPL42P4-201ENST00000453267 443 ntBASIC5.52□□□□□ -1.53
POLR2AP24928 MTCO3P35-201ENST00000485582 781 ntBASIC5.52□□□□□ -1.53
POLR2AP24928 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
POLR2AP24928 AC116353.3-201ENST00000511215 249 ntBASIC5.52□□□□□ -1.53
POLR2AP24928 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC5.52□□□□□ -1.53
POLR2AP24928 NPM1P52-201ENST00000518264 846 ntBASIC5.52□□□□□ -1.53
POLR2AP24928 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.52□□□□□ -1.53
POLR2AP24928 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
POLR2AP24928 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC5.52□□□□□ -1.53
POLR2AP24928 AC025918.2-201ENST00000558683 763 ntBASIC5.52□□□□□ -1.53
POLR2AP24928 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC5.52□□□□□ -1.53
POLR2AP24928 AC106785.1-201ENST00000565935 262 ntBASIC5.52□□□□□ -1.53
POLR2AP24928 RN7SL290P-201ENST00000578661 300 ntBASIC5.52□□□□□ -1.53
POLR2AP24928 SNORA74C-1-201ENST00000580726 201 ntBASIC5.52□□□□□ -1.53
POLR2AP24928 MIR4444-1-201ENST00000581696 74 ntBASIC5.52□□□□□ -1.53
POLR2AP24928 MIR4444-2-201ENST00000584390 74 ntBASIC5.52□□□□□ -1.53
POLR2AP24928 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.52□□□□□ -1.53
POLR2AP24928 AC245100.7-201ENST00000609678 442 ntBASIC5.52□□□□□ -1.53
POLR2AP24928 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.52□□□□□ -1.53
POLR2AP24928 Z69908.1-201ENST00000622603 247 ntBASIC5.52□□□□□ -1.53
POLR2AP24928 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.52□□□□□ -1.53
POLR2AP24928 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC5.52□□□□□ -1.53
POLR2AP24928 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
POLR2AP24928 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
POLR2AP24928 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
POLR2AP24928 AC135352.1-201ENST00000506173 1418 ntBASIC5.52□□□□□ -1.53
POLR2AP24928 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
POLR2AP24928 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
POLR2AP24928 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC5.51□□□□□ -1.53
POLR2AP24928 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
POLR2AP24928 MAPK10-263ENST00000641052 4307 ntBASIC5.51□□□□□ -1.53
POLR2AP24928 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.51□□□□□ -1.53
POLR2AP24928 SNORD115-48-201ENST00000364764 76 ntBASIC5.51□□□□□ -1.53
POLR2AP24928 RPS26P8-201ENST00000393490 348 ntBASIC5.51□□□□□ -1.53
POLR2AP24928 RPL21P67-201ENST00000402896 478 ntBASIC5.51□□□□□ -1.53
POLR2AP24928 AP000580.1-201ENST00000404439 358 ntBASIC5.51□□□□□ -1.53
POLR2AP24928 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.51□□□□□ -1.53
POLR2AP24928 AC096644.3-201ENST00000416788 338 ntBASIC5.51□□□□□ -1.53
POLR2AP24928 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.51□□□□□ -1.53
POLR2AP24928 ARL2BPP3-201ENST00000421226 480 ntBASIC5.51□□□□□ -1.53
POLR2AP24928 RGS17P1-201ENST00000423358 553 ntBASIC5.51□□□□□ -1.53
POLR2AP24928 VN1R42P-201ENST00000424651 344 ntBASIC5.51□□□□□ -1.53
POLR2AP24928 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC5.51□□□□□ -1.53
POLR2AP24928 AL445567.1-201ENST00000439121 144 ntBASIC5.51□□□□□ -1.53
POLR2AP24928 AC016772.1-201ENST00000444170 1261 ntBASIC5.51□□□□□ -1.53
POLR2AP24928 snoU13.22-201ENST00000459428 104 ntBASIC5.51□□□□□ -1.53
POLR2AP24928 RN7SL542P-201ENST00000467147 294 ntBASIC5.51□□□□□ -1.53
POLR2AP24928 TPT1P3-201ENST00000492841 512 ntBASIC5.51□□□□□ -1.53
POLR2AP24928 RPL36AP41-201ENST00000493820 306 ntBASIC5.51□□□□□ -1.53
POLR2AP24928 RPF2P2-201ENST00000504693 896 ntBASIC5.51□□□□□ -1.53
POLR2AP24928 AF213884.2-201ENST00000510417 903 ntBASIC5.51□□□□□ -1.53
POLR2AP24928 AC093755.1-201ENST00000512950 1023 ntBASIC5.51□□□□□ -1.53
POLR2AP24928 NDUFB4P12-201ENST00000513465 390 ntBASIC5.51□□□□□ -1.53
POLR2AP24928 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.51□□□□□ -1.53
POLR2AP24928 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC5.51□□□□□ -1.53
POLR2AP24928 ERP27-202ENST00000540097 993 ntTSL 2 BASIC5.51□□□□□ -1.53
POLR2AP24928 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.51□□□□□ -1.53
POLR2AP24928 ZNF321P-202ENST00000550843 495 ntBASIC5.51□□□□□ -1.53
POLR2AP24928 AGGF1P9-201ENST00000561884 913 ntBASIC5.51□□□□□ -1.53
POLR2AP24928 AGGF1P8-201ENST00000562979 1000 ntBASIC5.51□□□□□ -1.53
POLR2AP24928 RBM11P1-201ENST00000604951 799 ntBASIC5.51□□□□□ -1.53
POLR2AP24928 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC5.51□□□□□ -1.53
POLR2AP24928 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC5.51□□□□□ -1.53
POLR2AP24928 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
POLR2AP24928 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
POLR2AP24928 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
POLR2AP24928 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC5.51□□□□□ -1.53
POLR2AP24928 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
POLR2AP24928 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
POLR2AP24928 RPL21P65-201ENST00000406094 466 ntBASIC5.51□□□□□ -1.53
POLR2AP24928 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.51□□□□□ -1.53
POLR2AP24928 AC021876.1-201ENST00000425959 359 ntBASIC5.51□□□□□ -1.53
POLR2AP24928 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC5.51□□□□□ -1.53
POLR2AP24928 MTND1P4-201ENST00000435196 415 ntBASIC5.51□□□□□ -1.53
POLR2AP24928 MRPL35P2-201ENST00000448009 511 ntBASIC5.51□□□□□ -1.53
POLR2AP24928 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC5.51□□□□□ -1.53
POLR2AP24928 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.51□□□□□ -1.53
POLR2AP24928 AC041039.1-201ENST00000485656 536 ntBASIC5.51□□□□□ -1.53
POLR2AP24928 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC5.51□□□□□ -1.53
POLR2AP24928 MTCO1P31-201ENST00000506355 492 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms