Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
MT-ND1P03886 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
MT-ND1P03886 AC139769.1-204ENST00000472297 1931 ntBASIC4.23□□□□□ -1.73
MT-ND1P03886 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
MT-ND1P03886 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.23□□□□□ -1.73
MT-ND1P03886 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
MT-ND1P03886 OR14L1P-202ENST00000641545 3009 ntBASIC4.22□□□□□ -1.73
MT-ND1P03886 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
MT-ND1P03886 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
MT-ND1P03886 ZNF962P-201ENST00000443465 3140 ntBASIC4.22□□□□□ -1.73
MT-ND1P03886 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
MT-ND1P03886 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.22□□□□□ -1.73
MT-ND1P03886 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
MT-ND1P03886 MIR448-201ENST00000362131 111 ntBASIC4.22□□□□□ -1.73
MT-ND1P03886 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
MT-ND1P03886 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.22□□□□□ -1.73
MT-ND1P03886 RN7SKP267-201ENST00000410381 285 ntBASIC4.22□□□□□ -1.73
MT-ND1P03886 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC4.22□□□□□ -1.73
MT-ND1P03886 AC073335.1-201ENST00000427776 363 ntBASIC4.22□□□□□ -1.73
MT-ND1P03886 NRBF2P3-201ENST00000432731 865 ntBASIC4.22□□□□□ -1.73
MT-ND1P03886 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.22□□□□□ -1.73
MT-ND1P03886 ELOCP3-201ENST00000439303 348 ntBASIC4.22□□□□□ -1.73
MT-ND1P03886 AL513321.1-201ENST00000441175 761 ntBASIC4.22□□□□□ -1.73
MT-ND1P03886 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.22□□□□□ -1.73
MT-ND1P03886 OR1H1P-201ENST00000448731 937 ntBASIC4.22□□□□□ -1.73
MT-ND1P03886 AC010469.1-201ENST00000463864 576 ntBASIC4.22□□□□□ -1.73
MT-ND1P03886 RPL7AP6-201ENST00000477943 801 ntBASIC4.22□□□□□ -1.73
MT-ND1P03886 RPL36AP41-201ENST00000493820 306 ntBASIC4.22□□□□□ -1.73
MT-ND1P03886 AC025459.1-201ENST00000504072 156 ntBASIC4.22□□□□□ -1.73
MT-ND1P03886 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
MT-ND1P03886 AC010468.3-201ENST00000508225 458 ntBASIC4.22□□□□□ -1.73
MT-ND1P03886 AC010285.3-201ENST00000511668 676 ntBASIC4.22□□□□□ -1.73
MT-ND1P03886 HMGN1P15-201ENST00000513870 295 ntBASIC4.22□□□□□ -1.73
MT-ND1P03886 AC090819.1-201ENST00000523800 1111 ntBASIC4.22□□□□□ -1.73
MT-ND1P03886 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.22□□□□□ -1.73
MT-ND1P03886 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.22□□□□□ -1.73
MT-ND1P03886 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.22□□□□□ -1.73
MT-ND1P03886 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.22□□□□□ -1.73
MT-ND1P03886 EDDM3DP-201ENST00000554692 434 ntBASIC4.22□□□□□ -1.73
MT-ND1P03886 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.22□□□□□ -1.73
MT-ND1P03886 BGLT3-201ENST00000564523 994 ntBASIC4.22□□□□□ -1.73
MT-ND1P03886 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.22□□□□□ -1.73
MT-ND1P03886 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.22□□□□□ -1.73
MT-ND1P03886 AC005242.1-201ENST00000585658 438 ntBASIC4.22□□□□□ -1.73
MT-ND1P03886 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.22□□□□□ -1.73
MT-ND1P03886 AC008638.3-201ENST00000603341 463 ntBASIC4.22□□□□□ -1.73
MT-ND1P03886 SUMO2P14-201ENST00000604488 293 ntBASIC4.22□□□□□ -1.73
MT-ND1P03886 AL163051.2-201ENST00000618976 735 ntBASIC4.22□□□□□ -1.73
MT-ND1P03886 CR392039.4-201ENST00000624968 501 ntBASIC4.22□□□□□ -1.73
MT-ND1P03886 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.22□□□□□ -1.73
MT-ND1P03886 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.22□□□□□ -1.73
MT-ND1P03886 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.22□□□□□ -1.73
MT-ND1P03886 CR788268.1-201ENST00000603931 1809 ntBASIC4.22□□□□□ -1.73
MT-ND1P03886 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.22□□□□□ -1.73
MT-ND1P03886 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.22□□□□□ -1.73
MT-ND1P03886 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
MT-ND1P03886 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
MT-ND1P03886 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
MT-ND1P03886 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.22□□□□□ -1.73
MT-ND1P03886 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
MT-ND1P03886 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.22□□□□□ -1.73
MT-ND1P03886 AC074029.4-201ENST00000624796 1859 ntBASIC4.22□□□□□ -1.73
MT-ND1P03886 MAPK10-263ENST00000641052 4307 ntBASIC4.22□□□□□ -1.73
MT-ND1P03886 Z73965.1-201ENST00000623412 2297 ntBASIC4.21□□□□□ -1.73
MT-ND1P03886 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
MT-ND1P03886 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
MT-ND1P03886 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.21□□□□□ -1.74
MT-ND1P03886 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
MT-ND1P03886 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
MT-ND1P03886 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
MT-ND1P03886 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
MT-ND1P03886 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.21□□□□□ -1.74
MT-ND1P03886 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.21□□□□□ -1.74
MT-ND1P03886 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.21□□□□□ -1.74
MT-ND1P03886 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
MT-ND1P03886 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.21□□□□□ -1.74
MT-ND1P03886 AC013410.2-201ENST00000422627 201 ntBASIC4.21□□□□□ -1.74
MT-ND1P03886 RPEP2-201ENST00000432149 701 ntBASIC4.21□□□□□ -1.74
MT-ND1P03886 AC069285.2-201ENST00000440210 275 ntBASIC4.21□□□□□ -1.74
MT-ND1P03886 SUMO2P1-206ENST00000445436 284 ntBASIC4.21□□□□□ -1.74
MT-ND1P03886 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.21□□□□□ -1.74
MT-ND1P03886 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.21□□□□□ -1.74
MT-ND1P03886 RPL23AP73-201ENST00000492507 471 ntBASIC4.21□□□□□ -1.74
MT-ND1P03886 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.21□□□□□ -1.74
MT-ND1P03886 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC4.21□□□□□ -1.74
MT-ND1P03886 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
MT-ND1P03886 IFITM8P-201ENST00000522529 394 ntBASIC4.21□□□□□ -1.74
MT-ND1P03886 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.21□□□□□ -1.74
MT-ND1P03886 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.21□□□□□ -1.74
MT-ND1P03886 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.21□□□□□ -1.74
MT-ND1P03886 AC079148.1-201ENST00000565944 819 ntBASIC4.21□□□□□ -1.74
MT-ND1P03886 RN7SL652P-201ENST00000577769 300 ntBASIC4.21□□□□□ -1.74
MT-ND1P03886 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.21□□□□□ -1.74
MT-ND1P03886 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.21□□□□□ -1.74
MT-ND1P03886 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.21□□□□□ -1.74
MT-ND1P03886 AC144521.1-201ENST00000607148 956 ntBASIC4.21□□□□□ -1.74
MT-ND1P03886 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.21□□□□□ -1.74
MT-ND1P03886 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.21□□□□□ -1.74
MT-ND1P03886 AC006249.1-201ENST00000621223 471 ntBASIC4.21□□□□□ -1.74
MT-ND1P03886 AC095038.2-201ENST00000621464 1070 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms