Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
COL4A1P02462 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.77□□□□□ -1.65
COL4A1P02462 AL159987.2-201ENST00000432754 307 ntBASIC4.77□□□□□ -1.65
COL4A1P02462 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.77□□□□□ -1.65
COL4A1P02462 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.77□□□□□ -1.65
COL4A1P02462 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.77□□□□□ -1.65
COL4A1P02462 AC007458.1-201ENST00000542812 373 ntBASIC4.77□□□□□ -1.65
COL4A1P02462 MIR3200-201ENST00000580767 85 ntBASIC4.77□□□□□ -1.65
COL4A1P02462 MIR7154-201ENST00000620673 73 ntBASIC4.77□□□□□ -1.65
COL4A1P02462 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
COL4A1P02462 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.76□□□□□ -1.65
COL4A1P02462 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL4A1P02462 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
COL4A1P02462 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL4A1P02462 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL4A1P02462 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC4.76□□□□□ -1.65
COL4A1P02462 ZNF962P-201ENST00000443465 3140 ntBASIC4.76□□□□□ -1.65
COL4A1P02462 AC005008.1-201ENST00000456151 612 ntBASIC4.76□□□□□ -1.65
COL4A1P02462 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.76□□□□□ -1.65
COL4A1P02462 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.76□□□□□ -1.65
COL4A1P02462 PAICSP4-201ENST00000517543 1253 ntBASIC4.76□□□□□ -1.65
COL4A1P02462 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.76□□□□□ -1.65
COL4A1P02462 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.76□□□□□ -1.65
COL4A1P02462 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.76□□□□□ -1.65
COL4A1P02462 AC007066.2-202ENST00000566531 914 ntBASIC4.76□□□□□ -1.65
COL4A1P02462 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.76□□□□□ -1.65
COL4A1P02462 AC091953.5-201ENST00000622919 233 ntBASIC4.76□□□□□ -1.65
COL4A1P02462 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
COL4A1P02462 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL4A1P02462 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
COL4A1P02462 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.75□□□□□ -1.65
COL4A1P02462 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL4A1P02462 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.75□□□□□ -1.65
COL4A1P02462 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL4A1P02462 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL4A1P02462 AP002001.2-201ENST00000529025 1469 ntBASIC4.75□□□□□ -1.65
COL4A1P02462 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL4A1P02462 RNA5SP97-201ENST00000365006 84 ntBASIC4.75□□□□□ -1.65
COL4A1P02462 AL591419.1-201ENST00000427423 339 ntBASIC4.75□□□□□ -1.65
COL4A1P02462 AC115115.1-201ENST00000449927 248 ntBASIC4.75□□□□□ -1.65
COL4A1P02462 RPL7P49-201ENST00000471402 708 ntBASIC4.75□□□□□ -1.65
COL4A1P02462 SNORA70.18-201ENST00000516696 98 ntBASIC4.75□□□□□ -1.65
COL4A1P02462 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC4.75□□□□□ -1.65
COL4A1P02462 AC016839.1-201ENST00000578162 867 ntBASIC4.75□□□□□ -1.65
COL4A1P02462 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.75□□□□□ -1.65
COL4A1P02462 AC005412.1-201ENST00000580812 1049 ntBASIC4.75□□□□□ -1.65
COL4A1P02462 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.75□□□□□ -1.65
COL4A1P02462 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL4A1P02462 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL4A1P02462 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.75□□□□□ -1.65
COL4A1P02462 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.75□□□□□ -1.65
COL4A1P02462 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
COL4A1P02462 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
COL4A1P02462 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL4A1P02462 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.74□□□□□ -1.65
COL4A1P02462 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.74□□□□□ -1.65
COL4A1P02462 NPM1P36-201ENST00000415681 835 ntBASIC4.74□□□□□ -1.65
COL4A1P02462 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
COL4A1P02462 MTCO1P54-201ENST00000430139 712 ntBASIC4.74□□□□□ -1.65
COL4A1P02462 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.74□□□□□ -1.65
COL4A1P02462 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.74□□□□□ -1.65
COL4A1P02462 AC009852.2-201ENST00000567898 485 ntBASIC4.74□□□□□ -1.65
COL4A1P02462 SRGNP1-201ENST00000603392 451 ntBASIC4.74□□□□□ -1.65
COL4A1P02462 AC112198.2-201ENST00000426589 6996 ntBASIC4.74□□□□□ -1.65
COL4A1P02462 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC4.74□□□□□ -1.65
COL4A1P02462 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL4A1P02462 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.74□□□□□ -1.65
COL4A1P02462 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.74□□□□□ -1.65
COL4A1P02462 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL4A1P02462 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
COL4A1P02462 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL4A1P02462 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.73□□□□□ -1.65
COL4A1P02462 OR6K3-202ENST00000368146 996 ntBASIC4.73□□□□□ -1.65
COL4A1P02462 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.73□□□□□ -1.65
COL4A1P02462 AC009237.5-201ENST00000414271 501 ntBASIC4.73□□□□□ -1.65
COL4A1P02462 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.73□□□□□ -1.65
COL4A1P02462 NPM1P25-201ENST00000429734 854 ntBASIC4.73□□□□□ -1.65
COL4A1P02462 HIGD1AP4-201ENST00000430194 280 ntBASIC4.73□□□□□ -1.65
COL4A1P02462 HLA-N-201ENST00000437516 135 ntBASIC4.73□□□□□ -1.65
COL4A1P02462 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.73□□□□□ -1.65
COL4A1P02462 SETP14-201ENST00000497538 873 ntBASIC4.73□□□□□ -1.65
COL4A1P02462 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
COL4A1P02462 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.73□□□□□ -1.65
COL4A1P02462 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
COL4A1P02462 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.73□□□□□ -1.65
COL4A1P02462 AC019176.2-201ENST00000611579 315 ntBASIC4.73□□□□□ -1.65
COL4A1P02462 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.73□□□□□ -1.65
COL4A1P02462 AC007342.8-201ENST00000623278 678 ntBASIC4.73□□□□□ -1.65
COL4A1P02462 AP004289.2-201ENST00000444413 1457 ntBASIC4.73□□□□□ -1.65
COL4A1P02462 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.73□□□□□ -1.65
COL4A1P02462 MTND2P15-201ENST00000418575 892 ntBASIC4.73□□□□□ -1.65
COL4A1P02462 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
COL4A1P02462 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.73□□□□□ -1.65
COL4A1P02462 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
COL4A1P02462 AC007967.1-201ENST00000455422 1159 ntBASIC4.73□□□□□ -1.65
COL4A1P02462 PLGLA-201ENST00000465668 449 ntBASIC4.73□□□□□ -1.65
COL4A1P02462 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
COL4A1P02462 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.73□□□□□ -1.65
COL4A1P02462 BTG4P1-201ENST00000510421 183 ntBASIC4.73□□□□□ -1.65
COL4A1P02462 RN7SKP13-201ENST00000515933 244 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms