Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 CEACAMP9-201ENST00000442990 513 ntBASIC4.2□□□□□ -1.74
CLDN9O95484 RNU6-775P-201ENST00000459318 96 ntBASIC4.2□□□□□ -1.74
CLDN9O95484 AC079804.1-201ENST00000461922 436 ntBASIC4.2□□□□□ -1.74
CLDN9O95484 RPL7P22-201ENST00000466005 733 ntBASIC4.2□□□□□ -1.74
CLDN9O95484 OR52A4P-201ENST00000472867 958 ntBASIC4.2□□□□□ -1.74
CLDN9O95484 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.2□□□□□ -1.74
CLDN9O95484 AC005912.1-201ENST00000495392 255 ntBASIC4.2□□□□□ -1.74
CLDN9O95484 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.2□□□□□ -1.74
CLDN9O95484 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CLDN9O95484 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.2□□□□□ -1.74
CLDN9O95484 AC006499.6-201ENST00000511169 607 ntBASIC4.2□□□□□ -1.74
CLDN9O95484 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.2□□□□□ -1.74
CLDN9O95484 GLRXP2-201ENST00000555594 321 ntBASIC4.2□□□□□ -1.74
CLDN9O95484 CYP4A43P-201ENST00000568156 121 ntBASIC4.2□□□□□ -1.74
CLDN9O95484 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.2□□□□□ -1.74
CLDN9O95484 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.2□□□□□ -1.74
CLDN9O95484 SS18L2P2-201ENST00000583960 235 ntBASIC4.2□□□□□ -1.74
CLDN9O95484 PSMA6P4-201ENST00000603247 718 ntBASIC4.2□□□□□ -1.74
CLDN9O95484 AC090948.2-201ENST00000607363 564 ntBASIC4.2□□□□□ -1.74
CLDN9O95484 AL021997.2-201ENST00000615674 271 ntBASIC4.2□□□□□ -1.74
CLDN9O95484 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.2□□□□□ -1.74
CLDN9O95484 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.2□□□□□ -1.74
CLDN9O95484 AC090971.4-201ENST00000560291 1800 ntBASIC4.2□□□□□ -1.74
CLDN9O95484 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.2□□□□□ -1.74
CLDN9O95484 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.2□□□□□ -1.74
CLDN9O95484 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CLDN9O95484 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
CLDN9O95484 AL359715.4-201ENST00000606629 1436 ntBASIC4.2□□□□□ -1.74
CLDN9O95484 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.2□□□□□ -1.74
CLDN9O95484 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CLDN9O95484 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.19□□□□□ -1.74
CLDN9O95484 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLDN9O95484 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CLDN9O95484 RNA5SP175-201ENST00000364275 119 ntBASIC4.19□□□□□ -1.74
CLDN9O95484 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLDN9O95484 RPS16P5-201ENST00000406501 404 ntBASIC4.19□□□□□ -1.74
CLDN9O95484 EIF4A1P3-201ENST00000411521 244 ntBASIC4.19□□□□□ -1.74
CLDN9O95484 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.19□□□□□ -1.74
CLDN9O95484 TMSB10P2-201ENST00000416049 131 ntBASIC4.19□□□□□ -1.74
CLDN9O95484 AL807761.1-201ENST00000417622 171 ntBASIC4.19□□□□□ -1.74
CLDN9O95484 AL161631.1-201ENST00000417933 486 ntBASIC4.19□□□□□ -1.74
CLDN9O95484 DPY19L1P2-201ENST00000426647 915 ntBASIC4.19□□□□□ -1.74
CLDN9O95484 AL158073.1-201ENST00000426848 1104 ntBASIC4.19□□□□□ -1.74
CLDN9O95484 MTCO1P57-201ENST00000432182 261 ntBASIC4.19□□□□□ -1.74
CLDN9O95484 HLA-N-201ENST00000437516 135 ntBASIC4.19□□□□□ -1.74
CLDN9O95484 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.19□□□□□ -1.74
CLDN9O95484 AC005229.2-201ENST00000456995 399 ntBASIC4.19□□□□□ -1.74
CLDN9O95484 EIF2S2P5-201ENST00000457635 968 ntBASIC4.19□□□□□ -1.74
CLDN9O95484 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.19□□□□□ -1.74
CLDN9O95484 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.19□□□□□ -1.74
CLDN9O95484 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.19□□□□□ -1.74
CLDN9O95484 OR51K1P-201ENST00000510214 950 ntBASIC4.19□□□□□ -1.74
CLDN9O95484 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.19□□□□□ -1.74
CLDN9O95484 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.19□□□□□ -1.74
CLDN9O95484 AC090515.3-201ENST00000560431 315 ntBASIC4.19□□□□□ -1.74
CLDN9O95484 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.19□□□□□ -1.74
CLDN9O95484 MIMT1-201ENST00000597105 1050 ntBASIC4.19□□□□□ -1.74
CLDN9O95484 RPL26P30-202ENST00000602923 645 ntBASIC4.19□□□□□ -1.74
CLDN9O95484 AC012409.3-201ENST00000611343 981 ntBASIC4.19□□□□□ -1.74
CLDN9O95484 AC016957.2-201ENST00000616998 848 ntBASIC4.19□□□□□ -1.74
CLDN9O95484 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.19□□□□□ -1.74
CLDN9O95484 LINC00216-201ENST00000623548 1126 ntBASIC4.19□□□□□ -1.74
CLDN9O95484 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CLDN9O95484 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.19□□□□□ -1.74
CLDN9O95484 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.19□□□□□ -1.74
CLDN9O95484 AC093535.2-201ENST00000624769 2326 ntBASIC4.18□□□□□ -1.74
CLDN9O95484 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
CLDN9O95484 OR10J6P-201ENST00000289731 930 ntBASIC4.18□□□□□ -1.74
CLDN9O95484 OR5P1P-201ENST00000299512 925 ntBASIC4.18□□□□□ -1.74
CLDN9O95484 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN9O95484 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN9O95484 RNVU1-6-201ENST00000364688 164 ntBASIC4.18□□□□□ -1.74
CLDN9O95484 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.18□□□□□ -1.74
CLDN9O95484 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN9O95484 SNORA11F-201ENST00000408237 128 ntBASIC4.18□□□□□ -1.74
CLDN9O95484 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.18□□□□□ -1.74
CLDN9O95484 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN9O95484 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN9O95484 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.18□□□□□ -1.74
CLDN9O95484 AL356387.2-201ENST00000422272 243 ntBASIC4.18□□□□□ -1.74
CLDN9O95484 RPEP3-201ENST00000425462 676 ntBASIC4.18□□□□□ -1.74
CLDN9O95484 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.18□□□□□ -1.74
CLDN9O95484 AC011998.1-201ENST00000433403 117 ntBASIC4.18□□□□□ -1.74
CLDN9O95484 CEACAMP1-201ENST00000434624 1035 ntBASIC4.18□□□□□ -1.74
CLDN9O95484 RPL7P33-201ENST00000444159 742 ntBASIC4.18□□□□□ -1.74
CLDN9O95484 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.18□□□□□ -1.74
CLDN9O95484 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.18□□□□□ -1.74
CLDN9O95484 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.18□□□□□ -1.74
CLDN9O95484 AC006463.2-201ENST00000473326 348 ntBASIC4.18□□□□□ -1.74
CLDN9O95484 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CLDN9O95484 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.18□□□□□ -1.74
CLDN9O95484 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN9O95484 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CLDN9O95484 AC008083.2-201ENST00000546707 476 ntBASIC4.18□□□□□ -1.74
CLDN9O95484 AC021483.2-201ENST00000567415 758 ntBASIC4.18□□□□□ -1.74
CLDN9O95484 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.18□□□□□ -1.74
CLDN9O95484 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.18□□□□□ -1.74
CLDN9O95484 AC008745.1-201ENST00000604064 271 ntBASIC4.18□□□□□ -1.74
CLDN9O95484 AC025175.1-201ENST00000606482 759 ntBASIC4.18□□□□□ -1.74
CLDN9O95484 AC135803.1-201ENST00000608748 565 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 180.3 ms