Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.62□□□□□ -1.67
CTDNEP1O95476 RLIMP1-201ENST00000339626 1680 ntBASIC4.62□□□□□ -1.67
CTDNEP1O95476 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CTDNEP1O95476 RPL32P3-201ENST00000359025 275 ntBASIC4.62□□□□□ -1.67
CTDNEP1O95476 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CTDNEP1O95476 AC007068.1-201ENST00000396690 844 ntBASIC4.62□□□□□ -1.67
CTDNEP1O95476 RNU6-233P-201ENST00000410845 141 ntBASIC4.62□□□□□ -1.67
CTDNEP1O95476 MTND2P11-201ENST00000423638 648 ntBASIC4.62□□□□□ -1.67
CTDNEP1O95476 AL132838.2-201ENST00000492041 314 ntBASIC4.62□□□□□ -1.67
CTDNEP1O95476 HPRT1P1-201ENST00000509498 657 ntBASIC4.62□□□□□ -1.67
CTDNEP1O95476 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.62□□□□□ -1.67
CTDNEP1O95476 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.62□□□□□ -1.67
CTDNEP1O95476 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.62□□□□□ -1.67
CTDNEP1O95476 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.62□□□□□ -1.67
CTDNEP1O95476 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.62□□□□□ -1.67
CTDNEP1O95476 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC4.62□□□□□ -1.67
CTDNEP1O95476 AC124856.1-201ENST00000600819 896 ntBASIC4.62□□□□□ -1.67
CTDNEP1O95476 AL591034.3-201ENST00000605511 685 ntBASIC4.62□□□□□ -1.67
CTDNEP1O95476 MIR378J-201ENST00000611988 109 ntBASIC4.62□□□□□ -1.67
CTDNEP1O95476 MIR6716-201ENST00000613413 80 ntBASIC4.62□□□□□ -1.67
CTDNEP1O95476 AC090506.2-201ENST00000624521 419 ntBASIC4.62□□□□□ -1.67
CTDNEP1O95476 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.62□□□□□ -1.67
CTDNEP1O95476 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.62□□□□□ -1.67
CTDNEP1O95476 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CTDNEP1O95476 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CTDNEP1O95476 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.61□□□□□ -1.67
CTDNEP1O95476 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
CTDNEP1O95476 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
CTDNEP1O95476 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.61□□□□□ -1.67
CTDNEP1O95476 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CTDNEP1O95476 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.61□□□□□ -1.67
CTDNEP1O95476 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CTDNEP1O95476 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CTDNEP1O95476 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CTDNEP1O95476 RNA5SP317-201ENST00000410176 116 ntBASIC4.61□□□□□ -1.67
CTDNEP1O95476 RNA5SP311-201ENST00000411290 116 ntBASIC4.61□□□□□ -1.67
CTDNEP1O95476 AC016769.2-201ENST00000414815 475 ntBASIC4.61□□□□□ -1.67
CTDNEP1O95476 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.61□□□□□ -1.67
CTDNEP1O95476 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.61□□□□□ -1.67
CTDNEP1O95476 NPM1P34-201ENST00000428821 893 ntBASIC4.61□□□□□ -1.67
CTDNEP1O95476 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.61□□□□□ -1.67
CTDNEP1O95476 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.61□□□□□ -1.67
CTDNEP1O95476 RPS17P13-201ENST00000448974 407 ntBASIC4.61□□□□□ -1.67
CTDNEP1O95476 AC104849.1-201ENST00000462623 405 ntBASIC4.61□□□□□ -1.67
CTDNEP1O95476 RPL7P19-201ENST00000469948 618 ntBASIC4.61□□□□□ -1.67
CTDNEP1O95476 RN7SL860P-201ENST00000473738 223 ntBASIC4.61□□□□□ -1.67
CTDNEP1O95476 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.61□□□□□ -1.67
CTDNEP1O95476 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
CTDNEP1O95476 RNA5SP315-201ENST00000516340 116 ntBASIC4.61□□□□□ -1.67
CTDNEP1O95476 SNORA31.9-201ENST00000516429 84 ntBASIC4.61□□□□□ -1.67
CTDNEP1O95476 RNA5SP312-201ENST00000517068 116 ntBASIC4.61□□□□□ -1.67
CTDNEP1O95476 NDUFA5P2-201ENST00000519723 344 ntBASIC4.61□□□□□ -1.67
CTDNEP1O95476 ADAM3B-201ENST00000569937 840 ntBASIC4.61□□□□□ -1.67
CTDNEP1O95476 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC4.61□□□□□ -1.67
CTDNEP1O95476 SNX6P1-201ENST00000601728 1224 ntBASIC4.61□□□□□ -1.67
CTDNEP1O95476 AC010435.1-201ENST00000623353 1177 ntBASIC4.61□□□□□ -1.67
CTDNEP1O95476 AC009951.1-201ENST00000623674 2614 ntBASIC4.61□□□□□ -1.67
CTDNEP1O95476 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CTDNEP1O95476 UBE3AP2-201ENST00000429033 2259 ntBASIC4.61□□□□□ -1.67
CTDNEP1O95476 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.61□□□□□ -1.67
CTDNEP1O95476 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CTDNEP1O95476 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.6□□□□□ -1.67
CTDNEP1O95476 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CTDNEP1O95476 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
CTDNEP1O95476 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.6□□□□□ -1.67
CTDNEP1O95476 RNU4-6P-201ENST00000410804 122 ntBASIC4.6□□□□□ -1.67
CTDNEP1O95476 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.6□□□□□ -1.67
CTDNEP1O95476 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.6□□□□□ -1.67
CTDNEP1O95476 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.6□□□□□ -1.67
CTDNEP1O95476 AL391219.1-201ENST00000422570 483 ntBASIC4.6□□□□□ -1.67
CTDNEP1O95476 YWHAEP5-201ENST00000431545 765 ntBASIC4.6□□□□□ -1.67
CTDNEP1O95476 AL450263.2-201ENST00000439400 589 ntBASIC4.6□□□□□ -1.67
CTDNEP1O95476 HMGB1P37-201ENST00000439613 609 ntBASIC4.6□□□□□ -1.67
CTDNEP1O95476 H2AFZP6-201ENST00000444403 394 ntBASIC4.6□□□□□ -1.67
CTDNEP1O95476 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.6□□□□□ -1.67
CTDNEP1O95476 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.6□□□□□ -1.67
CTDNEP1O95476 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.6□□□□□ -1.67
CTDNEP1O95476 AC109458.1-201ENST00000508858 316 ntBASIC4.6□□□□□ -1.67
CTDNEP1O95476 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.6□□□□□ -1.67
CTDNEP1O95476 AC138701.1-201ENST00000524329 714 ntBASIC4.6□□□□□ -1.67
CTDNEP1O95476 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.6□□□□□ -1.67
CTDNEP1O95476 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.6□□□□□ -1.67
CTDNEP1O95476 AL590392.1-201ENST00000604960 446 ntBASIC4.6□□□□□ -1.67
CTDNEP1O95476 AC091167.4-201ENST00000605079 184 ntBASIC4.6□□□□□ -1.67
CTDNEP1O95476 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.6□□□□□ -1.67
CTDNEP1O95476 MIR4727-201ENST00000622232 55 ntBASIC4.6□□□□□ -1.67
CTDNEP1O95476 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CTDNEP1O95476 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.6□□□□□ -1.67
CTDNEP1O95476 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CTDNEP1O95476 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CTDNEP1O95476 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CTDNEP1O95476 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.6□□□□□ -1.67
CTDNEP1O95476 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CTDNEP1O95476 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CTDNEP1O95476 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.6□□□□□ -1.67
CTDNEP1O95476 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.59□□□□□ -1.67
CTDNEP1O95476 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CTDNEP1O95476 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.59□□□□□ -1.67
CTDNEP1O95476 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CTDNEP1O95476 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms