Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SSX4O60224 CR383656.6-201ENST00000550518 394 ntBASIC4.47□□□□□ -1.69
SSX4O60224 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.47□□□□□ -1.69
SSX4O60224 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.47□□□□□ -1.69
SSX4O60224 AC011447.4-201ENST00000587562 111 ntBASIC4.47□□□□□ -1.69
SSX4O60224 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.47□□□□□ -1.69
SSX4O60224 Z82195.1-201ENST00000604558 398 ntBASIC4.47□□□□□ -1.69
SSX4O60224 BNIP3P4-201ENST00000604946 565 ntBASIC4.47□□□□□ -1.69
SSX4O60224 AC027449.1-201ENST00000608890 407 ntBASIC4.47□□□□□ -1.69
SSX4O60224 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.47□□□□□ -1.69
SSX4O60224 AC016717.3-201ENST00000624730 554 ntBASIC4.47□□□□□ -1.69
SSX4O60224 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC4.47□□□□□ -1.69
SSX4O60224 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.47□□□□□ -1.69
SSX4O60224 AL121594.5-201ENST00000631724 573 ntBASIC4.47□□□□□ -1.69
SSX4O60224 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
SSX4O60224 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSX4O60224 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
SSX4O60224 AC120338.1-201ENST00000625074 1541 ntBASIC4.46□□□□□ -1.69
SSX4O60224 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
SSX4O60224 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SSX4O60224 AC068254.2-201ENST00000623938 3577 ntBASIC4.46□□□□□ -1.7
SSX4O60224 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SSX4O60224 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.46□□□□□ -1.7
SSX4O60224 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
SSX4O60224 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SSX4O60224 MIR525-201ENST00000384978 85 ntBASIC4.46□□□□□ -1.7
SSX4O60224 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
SSX4O60224 RPL7P27-201ENST00000403775 720 ntBASIC4.46□□□□□ -1.7
SSX4O60224 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.46□□□□□ -1.7
SSX4O60224 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.46□□□□□ -1.7
SSX4O60224 TAF13P2-201ENST00000416876 286 ntBASIC4.46□□□□□ -1.7
SSX4O60224 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.46□□□□□ -1.7
SSX4O60224 USP9YP21-201ENST00000420603 432 ntBASIC4.46□□□□□ -1.7
SSX4O60224 CKS1BP6-201ENST00000424932 240 ntBASIC4.46□□□□□ -1.7
SSX4O60224 AC104837.2-201ENST00000427236 424 ntBASIC4.46□□□□□ -1.7
SSX4O60224 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SSX4O60224 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.46□□□□□ -1.7
SSX4O60224 HMGB1P45-201ENST00000435986 653 ntBASIC4.46□□□□□ -1.7
SSX4O60224 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.46□□□□□ -1.7
SSX4O60224 AC004854.1-201ENST00000440356 349 ntBASIC4.46□□□□□ -1.7
SSX4O60224 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.46□□□□□ -1.7
SSX4O60224 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.46□□□□□ -1.7
SSX4O60224 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.46□□□□□ -1.7
SSX4O60224 AL929288.2-201ENST00000446368 407 ntBASIC4.46□□□□□ -1.7
SSX4O60224 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.46□□□□□ -1.7
SSX4O60224 AC092647.2-201ENST00000452998 253 ntBASIC4.46□□□□□ -1.7
SSX4O60224 RNU7-140P-201ENST00000459546 60 ntBASIC4.46□□□□□ -1.7
SSX4O60224 AC058823.1-201ENST00000485315 474 ntBASIC4.46□□□□□ -1.7
SSX4O60224 AC073073.1-201ENST00000493920 463 ntBASIC4.46□□□□□ -1.7
SSX4O60224 GTF2IP9-201ENST00000502460 301 ntBASIC4.46□□□□□ -1.7
SSX4O60224 UBE2V1P12-201ENST00000503954 474 ntBASIC4.46□□□□□ -1.7
SSX4O60224 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.46□□□□□ -1.7
SSX4O60224 AC096571.1-202ENST00000506634 735 ntBASIC4.46□□□□□ -1.7
SSX4O60224 AC108043.1-201ENST00000512696 574 ntBASIC4.46□□□□□ -1.7
SSX4O60224 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.46□□□□□ -1.7
SSX4O60224 AC012400.1-201ENST00000518452 381 ntBASIC4.46□□□□□ -1.7
SSX4O60224 AC010306.1-201ENST00000523223 1117 ntBASIC4.46□□□□□ -1.7
SSX4O60224 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.46□□□□□ -1.7
SSX4O60224 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.46□□□□□ -1.7
SSX4O60224 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.46□□□□□ -1.7
SSX4O60224 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.46□□□□□ -1.7
SSX4O60224 CYP2C60P-201ENST00000566088 139 ntBASIC4.46□□□□□ -1.7
SSX4O60224 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.46□□□□□ -1.7
SSX4O60224 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC4.46□□□□□ -1.7
SSX4O60224 RN7SL356P-201ENST00000582228 248 ntBASIC4.46□□□□□ -1.7
SSX4O60224 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.46□□□□□ -1.7
SSX4O60224 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.46□□□□□ -1.7
SSX4O60224 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.46□□□□□ -1.7
SSX4O60224 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.46□□□□□ -1.7
SSX4O60224 AC091979.2-201ENST00000607514 214 ntBASIC4.46□□□□□ -1.7
SSX4O60224 AL355816.1-201ENST00000607951 118 ntBASIC4.46□□□□□ -1.7
SSX4O60224 FAM25E-202ENST00000608562 189 ntBASIC4.46□□□□□ -1.7
SSX4O60224 AC131238.1-201ENST00000617135 328 ntBASIC4.46□□□□□ -1.7
SSX4O60224 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.46□□□□□ -1.7
SSX4O60224 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.46□□□□□ -1.7
SSX4O60224 AC023510.2-201ENST00000622162 746 ntBASIC4.46□□□□□ -1.7
SSX4O60224 AC091953.3-201ENST00000623220 236 ntBASIC4.46□□□□□ -1.7
SSX4O60224 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SSX4O60224 DDX18P3-201ENST00000404856 2007 ntBASIC4.46□□□□□ -1.7
SSX4O60224 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.46□□□□□ -1.7
SSX4O60224 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.46□□□□□ -1.7
SSX4O60224 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.46□□□□□ -1.7
SSX4O60224 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
SSX4O60224 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SSX4O60224 AC106754.1-201ENST00000562632 1513 ntBASIC4.46□□□□□ -1.7
SSX4O60224 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
SSX4O60224 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.46□□□□□ -1.7
SSX4O60224 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.46□□□□□ -1.7
SSX4O60224 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SSX4O60224 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SSX4O60224 AC092747.4-201ENST00000620519 1861 ntBASIC4.45□□□□□ -1.7
SSX4O60224 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SSX4O60224 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.45□□□□□ -1.7
SSX4O60224 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SSX4O60224 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SSX4O60224 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SSX4O60224 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
SSX4O60224 RNU6-353P-201ENST00000364266 108 ntBASIC4.45□□□□□ -1.7
SSX4O60224 RNA5SP455-201ENST00000365190 119 ntBASIC4.45□□□□□ -1.7
SSX4O60224 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms