Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
MSH4O15457 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
MSH4O15457 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
MSH4O15457 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
MSH4O15457 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
MSH4O15457 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.66□□□□□ -1.66
MSH4O15457 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
MSH4O15457 AP001273.1-201ENST00000624493 3152 ntBASIC4.66□□□□□ -1.66
MSH4O15457 ERCC6-202ENST00000374127 1782 ntBASIC4.66□□□□□ -1.66
MSH4O15457 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
MSH4O15457 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
MSH4O15457 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
MSH4O15457 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
MSH4O15457 AC092162.3-201ENST00000624511 1624 ntBASIC4.66□□□□□ -1.66
MSH4O15457 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
MSH4O15457 AC083843.3-201ENST00000623679 2186 ntBASIC4.66□□□□□ -1.66
MSH4O15457 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.66□□□□□ -1.66
MSH4O15457 OR11H4-201ENST00000315409 1082 ntBASIC4.66□□□□□ -1.66
MSH4O15457 VDAC2P1-201ENST00000399358 958 ntBASIC4.66□□□□□ -1.66
MSH4O15457 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.66□□□□□ -1.66
MSH4O15457 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.66□□□□□ -1.66
MSH4O15457 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.66□□□□□ -1.66
MSH4O15457 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
MSH4O15457 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.66□□□□□ -1.66
MSH4O15457 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.66□□□□□ -1.66
MSH4O15457 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.66□□□□□ -1.66
MSH4O15457 AC068587.1-201ENST00000483613 781 ntBASIC4.66□□□□□ -1.66
MSH4O15457 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.66□□□□□ -1.66
MSH4O15457 KRT19P6-201ENST00000510983 209 ntBASIC4.66□□□□□ -1.66
MSH4O15457 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.66□□□□□ -1.66
MSH4O15457 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.66□□□□□ -1.66
MSH4O15457 RFPL4AP5-201ENST00000514977 504 ntBASIC4.66□□□□□ -1.66
MSH4O15457 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.66□□□□□ -1.66
MSH4O15457 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.66□□□□□ -1.66
MSH4O15457 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
MSH4O15457 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.66□□□□□ -1.66
MSH4O15457 FAM106CP-201ENST00000582212 507 ntBASIC4.66□□□□□ -1.66
MSH4O15457 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.66□□□□□ -1.66
MSH4O15457 AC012213.4-201ENST00000606457 354 ntBASIC4.66□□□□□ -1.66
MSH4O15457 ZYXP1-201ENST00000617638 118 ntBASIC4.66□□□□□ -1.66
MSH4O15457 AC009704.2-201ENST00000618739 483 ntBASIC4.66□□□□□ -1.66
MSH4O15457 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
MSH4O15457 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
MSH4O15457 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
MSH4O15457 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.66□□□□□ -1.66
MSH4O15457 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
MSH4O15457 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
MSH4O15457 AL606537.1-201ENST00000607258 2011 ntBASIC4.65□□□□□ -1.66
MSH4O15457 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.65□□□□□ -1.66
MSH4O15457 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.66
MSH4O15457 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
MSH4O15457 MIR372-201ENST00000362225 67 ntBASIC4.65□□□□□ -1.67
MSH4O15457 RNA5SP515-201ENST00000364570 118 ntBASIC4.65□□□□□ -1.67
MSH4O15457 ENSAP1-201ENST00000392855 326 ntBASIC4.65□□□□□ -1.67
MSH4O15457 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.65□□□□□ -1.67
MSH4O15457 AL607077.1-201ENST00000401718 499 ntBASIC4.65□□□□□ -1.67
MSH4O15457 ZNF736P10Y-201ENST00000403990 1110 ntBASIC4.65□□□□□ -1.67
MSH4O15457 TPT1P2-201ENST00000413105 503 ntBASIC4.65□□□□□ -1.67
MSH4O15457 AC108032.1-201ENST00000416706 207 ntBASIC4.65□□□□□ -1.67
MSH4O15457 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.65□□□□□ -1.67
MSH4O15457 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.65□□□□□ -1.67
MSH4O15457 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.65□□□□□ -1.67
MSH4O15457 FTH1P2-201ENST00000466086 412 ntBASIC4.65□□□□□ -1.67
MSH4O15457 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
MSH4O15457 MTND3P6-201ENST00000485242 339 ntBASIC4.65□□□□□ -1.67
MSH4O15457 HPRT1P2-201ENST00000505250 544 ntBASIC4.65□□□□□ -1.67
MSH4O15457 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.65□□□□□ -1.67
MSH4O15457 DYNLL1P4-201ENST00000549314 266 ntBASIC4.65□□□□□ -1.67
MSH4O15457 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.65□□□□□ -1.67
MSH4O15457 AC027281.1-201ENST00000574178 758 ntBASIC4.65□□□□□ -1.67
MSH4O15457 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
MSH4O15457 AC067959.1-201ENST00000604334 379 ntBASIC4.65□□□□□ -1.67
MSH4O15457 MIR432-201ENST00000606207 94 ntBASIC4.65□□□□□ -1.67
MSH4O15457 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.65□□□□□ -1.67
MSH4O15457 AC092653.1-201ENST00000608509 531 ntBASIC4.65□□□□□ -1.67
MSH4O15457 AC112484.5-201ENST00000624189 228 ntBASIC4.65□□□□□ -1.67
MSH4O15457 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.65□□□□□ -1.67
MSH4O15457 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.65□□□□□ -1.67
MSH4O15457 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
MSH4O15457 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.65□□□□□ -1.67
MSH4O15457 RLIMP2-201ENST00000427891 1563 ntBASIC4.65□□□□□ -1.67
MSH4O15457 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
MSH4O15457 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
MSH4O15457 RLIMP1-201ENST00000339626 1680 ntBASIC4.64□□□□□ -1.67
MSH4O15457 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.64□□□□□ -1.67
MSH4O15457 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
MSH4O15457 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
MSH4O15457 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.64□□□□□ -1.67
MSH4O15457 RNA5SP479-201ENST00000364858 117 ntBASIC4.64□□□□□ -1.67
MSH4O15457 MT-RNR1-201ENST00000389680 954 ntBASIC4.64□□□□□ -1.67
MSH4O15457 RNA5SP105-201ENST00000391123 113 ntBASIC4.64□□□□□ -1.67
MSH4O15457 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
MSH4O15457 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
MSH4O15457 AC007064.3-201ENST00000422608 359 ntBASIC4.64□□□□□ -1.67
MSH4O15457 GTF2IP2-201ENST00000424290 697 ntBASIC4.64□□□□□ -1.67
MSH4O15457 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.64□□□□□ -1.67
MSH4O15457 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.64□□□□□ -1.67
MSH4O15457 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.64□□□□□ -1.67
MSH4O15457 AL358472.1-201ENST00000431295 329 ntBASIC4.64□□□□□ -1.67
MSH4O15457 HMGB3P10-201ENST00000434734 572 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms