Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 TEX41-265ENST00000627785 704 ntTSL 5 BASIC5.14□□□□□ -1.59
RGPD3A6NKT7 TEX41-280ENST00000629185 591 ntTSL 5 BASIC5.14□□□□□ -1.59
RGPD3A6NKT7 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.14□□□□□ -1.59
RGPD3A6NKT7 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RGPD3A6NKT7 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RGPD3A6NKT7 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RGPD3A6NKT7 NCOA4P2-201ENST00000340589 1813 ntBASIC5.13□□□□□ -1.59
RGPD3A6NKT7 RNU6-1279P-201ENST00000383917 103 ntBASIC5.13□□□□□ -1.59
RGPD3A6NKT7 Y_RNA.500-201ENST00000384466 111 ntBASIC5.13□□□□□ -1.59
RGPD3A6NKT7 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC5.13□□□□□ -1.59
RGPD3A6NKT7 AL359643.1-201ENST00000404109 423 ntBASIC5.13□□□□□ -1.59
RGPD3A6NKT7 AL078604.1-201ENST00000404609 466 ntBASIC5.13□□□□□ -1.59
RGPD3A6NKT7 ATP5A1P2-201ENST00000412323 255 ntBASIC5.13□□□□□ -1.59
RGPD3A6NKT7 AL590609.2-201ENST00000421430 368 ntBASIC5.13□□□□□ -1.59
RGPD3A6NKT7 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.13□□□□□ -1.59
RGPD3A6NKT7 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC5.13□□□□□ -1.59
RGPD3A6NKT7 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC5.13□□□□□ -1.59
RGPD3A6NKT7 RN7SKP57-201ENST00000517248 293 ntBASIC5.13□□□□□ -1.59
RGPD3A6NKT7 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC5.13□□□□□ -1.59
RGPD3A6NKT7 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.13□□□□□ -1.59
RGPD3A6NKT7 AC115621.1-201ENST00000604653 858 ntBASIC5.13□□□□□ -1.59
RGPD3A6NKT7 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.13□□□□□ -1.59
RGPD3A6NKT7 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.13□□□□□ -1.59
RGPD3A6NKT7 AC234782.5-201ENST00000617723 324 ntBASIC5.13□□□□□ -1.59
RGPD3A6NKT7 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.13□□□□□ -1.59
RGPD3A6NKT7 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.13□□□□□ -1.59
RGPD3A6NKT7 AC120036.2-201ENST00000509729 1474 ntBASIC5.12□□□□□ -1.59
RGPD3A6NKT7 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RGPD3A6NKT7 MIR1289-1-201ENST00000408836 144 ntBASIC5.12□□□□□ -1.59
RGPD3A6NKT7 SETP4-201ENST00000455717 868 ntBASIC5.12□□□□□ -1.59
RGPD3A6NKT7 DEFB109D-201ENST00000529497 240 ntBASIC5.12□□□□□ -1.59
RGPD3A6NKT7 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.12□□□□□ -1.59
RGPD3A6NKT7 MIR8069-1-201ENST00000616627 86 ntBASIC5.12□□□□□ -1.59
RGPD3A6NKT7 MIR8069-2-201ENST00000621412 86 ntBASIC5.12□□□□□ -1.59
RGPD3A6NKT7 AC138965.3-201ENST00000623875 498 ntBASIC5.12□□□□□ -1.59
RGPD3A6NKT7 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.12□□□□□ -1.59
RGPD3A6NKT7 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
RGPD3A6NKT7 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RGPD3A6NKT7 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RGPD3A6NKT7 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RGPD3A6NKT7 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RGPD3A6NKT7 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
RGPD3A6NKT7 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RGPD3A6NKT7 RNA5SP51-201ENST00000364750 119 ntBASIC5.11□□□□□ -1.59
RGPD3A6NKT7 MIR490-201ENST00000384865 128 ntBASIC5.11□□□□□ -1.59
RGPD3A6NKT7 Z97055.1-201ENST00000419730 712 ntBASIC5.11□□□□□ -1.59
RGPD3A6NKT7 CYCSP4-201ENST00000429682 331 ntBASIC5.11□□□□□ -1.59
RGPD3A6NKT7 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RGPD3A6NKT7 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC5.11□□□□□ -1.59
RGPD3A6NKT7 RPL21P23-201ENST00000446654 460 ntBASIC5.11□□□□□ -1.59
RGPD3A6NKT7 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RGPD3A6NKT7 AC017015.1-201ENST00000477387 286 ntBASIC5.11□□□□□ -1.59
RGPD3A6NKT7 CDH12P2-201ENST00000504393 298 ntBASIC5.11□□□□□ -1.59
RGPD3A6NKT7 RPL23AP94-201ENST00000512518 302 ntBASIC5.11□□□□□ -1.59
RGPD3A6NKT7 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.11□□□□□ -1.59
RGPD3A6NKT7 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.11□□□□□ -1.59
RGPD3A6NKT7 AC015722.2-201ENST00000622210 551 ntBASIC5.11□□□□□ -1.59
RGPD3A6NKT7 AC015871.5-202ENST00000623252 701 ntBASIC5.11□□□□□ -1.59
RGPD3A6NKT7 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
RGPD3A6NKT7 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RGPD3A6NKT7 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC5.11□□□□□ -1.59
RGPD3A6NKT7 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC5.11□□□□□ -1.59
RGPD3A6NKT7 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RGPD3A6NKT7 RNU1-33P-201ENST00000364249 162 ntBASIC5.11□□□□□ -1.59
RGPD3A6NKT7 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.11□□□□□ -1.59
RGPD3A6NKT7 OR4K6P-201ENST00000416478 897 ntBASIC5.11□□□□□ -1.59
RGPD3A6NKT7 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.11□□□□□ -1.59
RGPD3A6NKT7 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC5.11□□□□□ -1.59
RGPD3A6NKT7 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RGPD3A6NKT7 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.11□□□□□ -1.59
RGPD3A6NKT7 AC008966.2-201ENST00000606157 453 ntBASIC5.11□□□□□ -1.59
RGPD3A6NKT7 MIR8058-201ENST00000615737 89 ntBASIC5.11□□□□□ -1.59
RGPD3A6NKT7 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.11□□□□□ -1.59
RGPD3A6NKT7 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
RGPD3A6NKT7 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.11□□□□□ -1.59
RGPD3A6NKT7 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RGPD3A6NKT7 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC5.1□□□□□ -1.59
RGPD3A6NKT7 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
RGPD3A6NKT7 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RGPD3A6NKT7 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC5.1□□□□□ -1.59
RGPD3A6NKT7 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RGPD3A6NKT7 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
RGPD3A6NKT7 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RGPD3A6NKT7 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.1□□□□□ -1.59
RGPD3A6NKT7 RPL23AP25-201ENST00000430973 463 ntBASIC5.1□□□□□ -1.59
RGPD3A6NKT7 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.1□□□□□ -1.59
RGPD3A6NKT7 RAD23BP3-201ENST00000454157 1152 ntBASIC5.1□□□□□ -1.59
RGPD3A6NKT7 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.1□□□□□ -1.59
RGPD3A6NKT7 COX6CP4-201ENST00000605798 228 ntBASIC5.1□□□□□ -1.59
RGPD3A6NKT7 AL355365.1-201ENST00000616480 294 ntBASIC5.1□□□□□ -1.59
RGPD3A6NKT7 MIR8057-201ENST00000620957 69 ntBASIC5.1□□□□□ -1.59
RGPD3A6NKT7 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RGPD3A6NKT7 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RGPD3A6NKT7 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC5.1□□□□□ -1.59
RGPD3A6NKT7 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RGPD3A6NKT7 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
RGPD3A6NKT7 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.09□□□□□ -1.59
RGPD3A6NKT7 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.09□□□□□ -1.59
RGPD3A6NKT7 RPL36AP10-201ENST00000421785 322 ntBASIC5.09□□□□□ -1.59
RGPD3A6NKT7 DCLRE1CP1-201ENST00000454630 470 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms