Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.46□□□□□ -1.7
SMIM28A0A1B0GU29 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.46□□□□□ -1.7
SMIM28A0A1B0GU29 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.46□□□□□ -1.7
SMIM28A0A1B0GU29 AC016911.1-201ENST00000613297 452 ntBASIC4.46□□□□□ -1.7
SMIM28A0A1B0GU29 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SMIM28A0A1B0GU29 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
SMIM28A0A1B0GU29 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SMIM28A0A1B0GU29 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SMIM28A0A1B0GU29 USP9YP4-201ENST00000424401 1745 ntBASIC4.46□□□□□ -1.7
SMIM28A0A1B0GU29 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
SMIM28A0A1B0GU29 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
SMIM28A0A1B0GU29 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SMIM28A0A1B0GU29 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.45□□□□□ -1.7
SMIM28A0A1B0GU29 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.45□□□□□ -1.7
SMIM28A0A1B0GU29 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
SMIM28A0A1B0GU29 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.45□□□□□ -1.7
SMIM28A0A1B0GU29 RNU6-386P-201ENST00000362650 107 ntBASIC4.45□□□□□ -1.7
SMIM28A0A1B0GU29 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SMIM28A0A1B0GU29 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.45□□□□□ -1.7
SMIM28A0A1B0GU29 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.45□□□□□ -1.7
SMIM28A0A1B0GU29 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.45□□□□□ -1.7
SMIM28A0A1B0GU29 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.45□□□□□ -1.7
SMIM28A0A1B0GU29 VDAC1P6-201ENST00000430062 855 ntBASIC4.45□□□□□ -1.7
SMIM28A0A1B0GU29 PRELID3BP10-201ENST00000431957 584 ntBASIC4.45□□□□□ -1.7
SMIM28A0A1B0GU29 AL392003.1-201ENST00000434394 243 ntBASIC4.45□□□□□ -1.7
SMIM28A0A1B0GU29 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.45□□□□□ -1.7
SMIM28A0A1B0GU29 MTND6P32-201ENST00000457611 483 ntBASIC4.45□□□□□ -1.7
SMIM28A0A1B0GU29 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.45□□□□□ -1.7
SMIM28A0A1B0GU29 RPL38P1-201ENST00000460914 211 ntBASIC4.45□□□□□ -1.7
SMIM28A0A1B0GU29 RPL7P1-201ENST00000468161 747 ntBASIC4.45□□□□□ -1.7
SMIM28A0A1B0GU29 RPL7P9-201ENST00000468715 747 ntBASIC4.45□□□□□ -1.7
SMIM28A0A1B0GU29 AC022336.1-201ENST00000475510 337 ntBASIC4.45□□□□□ -1.7
SMIM28A0A1B0GU29 OR7E10P-201ENST00000526420 991 ntBASIC4.45□□□□□ -1.7
SMIM28A0A1B0GU29 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.45□□□□□ -1.7
SMIM28A0A1B0GU29 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.45□□□□□ -1.7
SMIM28A0A1B0GU29 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
SMIM28A0A1B0GU29 AC106785.1-201ENST00000565935 262 ntBASIC4.45□□□□□ -1.7
SMIM28A0A1B0GU29 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.45□□□□□ -1.7
SMIM28A0A1B0GU29 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.45□□□□□ -1.7
SMIM28A0A1B0GU29 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.45□□□□□ -1.7
SMIM28A0A1B0GU29 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
SMIM28A0A1B0GU29 AC092162.3-201ENST00000624511 1624 ntBASIC4.45□□□□□ -1.7
SMIM28A0A1B0GU29 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.45□□□□□ -1.7
SMIM28A0A1B0GU29 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
SMIM28A0A1B0GU29 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.45□□□□□ -1.7
SMIM28A0A1B0GU29 AC093775.1-201ENST00000624154 1868 ntBASIC4.45□□□□□ -1.7
SMIM28A0A1B0GU29 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SMIM28A0A1B0GU29 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.45□□□□□ -1.7
SMIM28A0A1B0GU29 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SMIM28A0A1B0GU29 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.44□□□□□ -1.7
SMIM28A0A1B0GU29 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
SMIM28A0A1B0GU29 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SMIM28A0A1B0GU29 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.44□□□□□ -1.7
SMIM28A0A1B0GU29 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.44□□□□□ -1.7
SMIM28A0A1B0GU29 HSPE1P12-201ENST00000412576 301 ntBASIC4.44□□□□□ -1.7
SMIM28A0A1B0GU29 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SMIM28A0A1B0GU29 RPS23P10-201ENST00000416185 486 ntBASIC4.44□□□□□ -1.7
SMIM28A0A1B0GU29 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SMIM28A0A1B0GU29 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.44□□□□□ -1.7
SMIM28A0A1B0GU29 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.44□□□□□ -1.7
SMIM28A0A1B0GU29 RPL23AP89-201ENST00000439324 255 ntBASIC4.44□□□□□ -1.7
SMIM28A0A1B0GU29 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SMIM28A0A1B0GU29 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.44□□□□□ -1.7
SMIM28A0A1B0GU29 ATG10-AS1-201ENST00000504846 648 ntBASIC4.44□□□□□ -1.7
SMIM28A0A1B0GU29 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.44□□□□□ -1.7
SMIM28A0A1B0GU29 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SMIM28A0A1B0GU29 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.44□□□□□ -1.7
SMIM28A0A1B0GU29 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.44□□□□□ -1.7
SMIM28A0A1B0GU29 AC068993.1-201ENST00000546724 589 ntBASIC4.44□□□□□ -1.7
SMIM28A0A1B0GU29 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.44□□□□□ -1.7
SMIM28A0A1B0GU29 AC122134.1-201ENST00000565664 1104 ntBASIC4.44□□□□□ -1.7
SMIM28A0A1B0GU29 AGGF1P6-201ENST00000569213 976 ntBASIC4.44□□□□□ -1.7
SMIM28A0A1B0GU29 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SMIM28A0A1B0GU29 AL109618.2-201ENST00000605527 211 ntBASIC4.44□□□□□ -1.7
SMIM28A0A1B0GU29 AC026979.4-201ENST00000606555 645 ntBASIC4.44□□□□□ -1.7
SMIM28A0A1B0GU29 AC138907.10-201ENST00000623708 983 ntBASIC4.44□□□□□ -1.7
SMIM28A0A1B0GU29 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SMIM28A0A1B0GU29 ERCC6-202ENST00000374127 1782 ntBASIC4.44□□□□□ -1.7
SMIM28A0A1B0GU29 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.44□□□□□ -1.7
SMIM28A0A1B0GU29 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
SMIM28A0A1B0GU29 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SMIM28A0A1B0GU29 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.43□□□□□ -1.7
SMIM28A0A1B0GU29 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SMIM28A0A1B0GU29 CASC19-261ENST00000641853 1638 ntBASIC4.43□□□□□ -1.7
SMIM28A0A1B0GU29 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
SMIM28A0A1B0GU29 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
SMIM28A0A1B0GU29 RNA5SP513-201ENST00000364648 118 ntBASIC4.43□□□□□ -1.7
SMIM28A0A1B0GU29 AC083799.1-201ENST00000366451 910 ntBASIC4.43□□□□□ -1.7
SMIM28A0A1B0GU29 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SMIM28A0A1B0GU29 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SMIM28A0A1B0GU29 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SMIM28A0A1B0GU29 RNU6-564P-201ENST00000410983 104 ntBASIC4.43□□□□□ -1.7
SMIM28A0A1B0GU29 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SMIM28A0A1B0GU29 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.43□□□□□ -1.7
SMIM28A0A1B0GU29 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.43□□□□□ -1.7
SMIM28A0A1B0GU29 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.43□□□□□ -1.7
SMIM28A0A1B0GU29 MAPRE1P3-201ENST00000435438 796 ntBASIC4.43□□□□□ -1.7
SMIM28A0A1B0GU29 AC005008.1-201ENST00000456151 612 ntBASIC4.43□□□□□ -1.7
SMIM28A0A1B0GU29 RPL31P53-201ENST00000457065 348 ntBASIC4.43□□□□□ -1.7
SMIM28A0A1B0GU29 TPT1P3-201ENST00000492841 512 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms