Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC5.32□□□□□ -1.56
DKK3Q9UBP4 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.32□□□□□ -1.56
DKK3Q9UBP4 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.32□□□□□ -1.56
DKK3Q9UBP4 AL365203.2-201ENST00000423444 196 ntBASIC5.32□□□□□ -1.56
DKK3Q9UBP4 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.32□□□□□ -1.56
DKK3Q9UBP4 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
DKK3Q9UBP4 C1DP1-201ENST00000426049 402 ntBASIC5.32□□□□□ -1.56
DKK3Q9UBP4 HIGD1AP12-201ENST00000427832 281 ntBASIC5.32□□□□□ -1.56
DKK3Q9UBP4 FABP7P2-201ENST00000429946 379 ntBASIC5.32□□□□□ -1.56
DKK3Q9UBP4 RPL12P3-201ENST00000440080 396 ntBASIC5.32□□□□□ -1.56
DKK3Q9UBP4 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.32□□□□□ -1.56
DKK3Q9UBP4 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.32□□□□□ -1.56
DKK3Q9UBP4 AC104978.1-201ENST00000449387 391 ntBASIC5.32□□□□□ -1.56
DKK3Q9UBP4 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC5.32□□□□□ -1.56
DKK3Q9UBP4 AC233982.1-201ENST00000451247 436 ntBASIC5.32□□□□□ -1.56
DKK3Q9UBP4 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.32□□□□□ -1.56
DKK3Q9UBP4 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
DKK3Q9UBP4 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC5.32□□□□□ -1.56
DKK3Q9UBP4 AC037198.2-201ENST00000478845 733 ntBASIC5.32□□□□□ -1.56
DKK3Q9UBP4 AC022133.1-201ENST00000490961 571 ntBASIC5.32□□□□□ -1.56
DKK3Q9UBP4 OR2A20P-203ENST00000498397 1268 ntBASIC5.32□□□□□ -1.56
DKK3Q9UBP4 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.32□□□□□ -1.56
DKK3Q9UBP4 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC5.32□□□□□ -1.56
DKK3Q9UBP4 NPM1P6-201ENST00000521088 871 ntBASIC5.32□□□□□ -1.56
DKK3Q9UBP4 AP003461.1-201ENST00000528866 78 ntBASIC5.32□□□□□ -1.56
DKK3Q9UBP4 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
DKK3Q9UBP4 AC090888.1-201ENST00000561335 1141 ntBASIC5.32□□□□□ -1.56
DKK3Q9UBP4 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC5.32□□□□□ -1.56
DKK3Q9UBP4 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
DKK3Q9UBP4 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.32□□□□□ -1.56
DKK3Q9UBP4 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.32□□□□□ -1.56
DKK3Q9UBP4 AC108738.1-201ENST00000603703 237 ntBASIC5.32□□□□□ -1.56
DKK3Q9UBP4 AP000255.1-201ENST00000610276 676 ntBASIC5.32□□□□□ -1.56
DKK3Q9UBP4 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.32□□□□□ -1.56
DKK3Q9UBP4 AC015908.5-201ENST00000623289 343 ntBASIC5.32□□□□□ -1.56
DKK3Q9UBP4 AP002505.2-201ENST00000623585 696 ntBASIC5.32□□□□□ -1.56
DKK3Q9UBP4 AC021106.3-201ENST00000623925 531 ntBASIC5.32□□□□□ -1.56
DKK3Q9UBP4 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
DKK3Q9UBP4 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
DKK3Q9UBP4 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
DKK3Q9UBP4 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
DKK3Q9UBP4 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.32□□□□□ -1.56
DKK3Q9UBP4 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
DKK3Q9UBP4 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
DKK3Q9UBP4 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
DKK3Q9UBP4 AC092747.4-201ENST00000620519 1861 ntBASIC5.32□□□□□ -1.56
DKK3Q9UBP4 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
DKK3Q9UBP4 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
DKK3Q9UBP4 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
DKK3Q9UBP4 AL390862.1-201ENST00000635467 1469 ntBASIC5.32□□□□□ -1.56
DKK3Q9UBP4 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.32□□□□□ -1.56
DKK3Q9UBP4 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
DKK3Q9UBP4 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.31□□□□□ -1.56
DKK3Q9UBP4 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
DKK3Q9UBP4 VN2R3P-201ENST00000422626 1412 ntBASIC5.31□□□□□ -1.56
DKK3Q9UBP4 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
DKK3Q9UBP4 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
DKK3Q9UBP4 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
DKK3Q9UBP4 AC104446.1-201ENST00000613728 1321 ntBASIC5.31□□□□□ -1.56
DKK3Q9UBP4 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
DKK3Q9UBP4 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.31□□□□□ -1.56
DKK3Q9UBP4 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
DKK3Q9UBP4 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.31□□□□□ -1.56
DKK3Q9UBP4 FAM133CP-201ENST00000332869 704 ntBASIC5.31□□□□□ -1.56
DKK3Q9UBP4 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
DKK3Q9UBP4 U3.3-201ENST00000362986 216 ntBASIC5.31□□□□□ -1.56
DKK3Q9UBP4 AL590084.1-201ENST00000407885 387 ntBASIC5.31□□□□□ -1.56
DKK3Q9UBP4 AL139128.1-201ENST00000413921 941 ntBASIC5.31□□□□□ -1.56
DKK3Q9UBP4 AC073136.2-201ENST00000417282 849 ntBASIC5.31□□□□□ -1.56
DKK3Q9UBP4 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.31□□□□□ -1.56
DKK3Q9UBP4 MTND4P20-201ENST00000424125 869 ntBASIC5.31□□□□□ -1.56
DKK3Q9UBP4 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.31□□□□□ -1.56
DKK3Q9UBP4 MTND1P20-201ENST00000430341 950 ntBASIC5.31□□□□□ -1.56
DKK3Q9UBP4 RPL34P6-201ENST00000432390 345 ntBASIC5.31□□□□□ -1.56
DKK3Q9UBP4 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.31□□□□□ -1.56
DKK3Q9UBP4 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.31□□□□□ -1.56
DKK3Q9UBP4 ARL4AP3-201ENST00000441452 574 ntBASIC5.31□□□□□ -1.56
DKK3Q9UBP4 MTCO2P7-201ENST00000446518 666 ntBASIC5.31□□□□□ -1.56
DKK3Q9UBP4 CALM1P2-201ENST00000452941 448 ntBASIC5.31□□□□□ -1.56
DKK3Q9UBP4 APOOP2-201ENST00000461561 539 ntBASIC5.31□□□□□ -1.56
DKK3Q9UBP4 AC093267.1-201ENST00000489176 961 ntBASIC5.31□□□□□ -1.56
DKK3Q9UBP4 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.31□□□□□ -1.56
DKK3Q9UBP4 RPF2P2-201ENST00000504693 896 ntBASIC5.31□□□□□ -1.56
DKK3Q9UBP4 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
DKK3Q9UBP4 BTG4P1-201ENST00000510421 183 ntBASIC5.31□□□□□ -1.56
DKK3Q9UBP4 IMPA1P1-201ENST00000510718 842 ntBASIC5.31□□□□□ -1.56
DKK3Q9UBP4 GTF2F2P1-201ENST00000511083 675 ntBASIC5.31□□□□□ -1.56
DKK3Q9UBP4 AF186190.1-201ENST00000517470 480 ntBASIC5.31□□□□□ -1.56
DKK3Q9UBP4 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.31□□□□□ -1.56
DKK3Q9UBP4 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.31□□□□□ -1.56
DKK3Q9UBP4 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.31□□□□□ -1.56
DKK3Q9UBP4 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.31□□□□□ -1.56
DKK3Q9UBP4 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.31□□□□□ -1.56
DKK3Q9UBP4 ERP27-202ENST00000540097 993 ntTSL 2 BASIC5.31□□□□□ -1.56
DKK3Q9UBP4 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC5.31□□□□□ -1.56
DKK3Q9UBP4 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.31□□□□□ -1.56
DKK3Q9UBP4 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC5.31□□□□□ -1.56
DKK3Q9UBP4 AC008015.1-201ENST00000555505 465 ntBASIC5.31□□□□□ -1.56
DKK3Q9UBP4 AC074050.1-201ENST00000563247 211 ntBASIC5.31□□□□□ -1.56
DKK3Q9UBP4 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 145.5 ms