Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC3.9□□□□□ -1.79
CLCF1Q9UBD9 GSTA7P-201ENST00000438425 448 ntBASIC3.9□□□□□ -1.79
CLCF1Q9UBD9 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC3.9□□□□□ -1.79
CLCF1Q9UBD9 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CLCF1Q9UBD9 AL035551.1-201ENST00000446931 348 ntBASIC3.9□□□□□ -1.79
CLCF1Q9UBD9 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC3.9□□□□□ -1.79
CLCF1Q9UBD9 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC3.9□□□□□ -1.79
CLCF1Q9UBD9 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.9□□□□□ -1.79
CLCF1Q9UBD9 RPL7AP52-201ENST00000458096 790 ntBASIC3.9□□□□□ -1.79
CLCF1Q9UBD9 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.9□□□□□ -1.79
CLCF1Q9UBD9 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.9□□□□□ -1.79
CLCF1Q9UBD9 TCP11X3P-202ENST00000514289 1254 ntBASIC3.9□□□□□ -1.79
CLCF1Q9UBD9 RNU6-362P-201ENST00000516736 90 ntBASIC3.9□□□□□ -1.79
CLCF1Q9UBD9 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC3.9□□□□□ -1.79
CLCF1Q9UBD9 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.9□□□□□ -1.79
CLCF1Q9UBD9 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC3.9□□□□□ -1.79
CLCF1Q9UBD9 AC012414.2-201ENST00000559474 187 ntBASIC3.9□□□□□ -1.79
CLCF1Q9UBD9 AC011477.5-201ENST00000586571 259 ntBASIC3.9□□□□□ -1.79
CLCF1Q9UBD9 RPL7P50-201ENST00000600588 727 ntBASIC3.9□□□□□ -1.79
CLCF1Q9UBD9 RNF138P2-201ENST00000603490 592 ntBASIC3.9□□□□□ -1.79
CLCF1Q9UBD9 ARF4P1-201ENST00000605447 541 ntBASIC3.9□□□□□ -1.79
CLCF1Q9UBD9 AC025175.1-201ENST00000606482 759 ntBASIC3.9□□□□□ -1.79
CLCF1Q9UBD9 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.9□□□□□ -1.79
CLCF1Q9UBD9 AC074276.2-201ENST00000619891 348 ntBASIC3.9□□□□□ -1.79
CLCF1Q9UBD9 MIR3653-201ENST00000625572 110 ntBASIC3.9□□□□□ -1.79
CLCF1Q9UBD9 AL592182.3-201ENST00000642132 3304 ntBASIC3.9□□□□□ -1.79
CLCF1Q9UBD9 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC3.9□□□□□ -1.79
CLCF1Q9UBD9 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CLCF1Q9UBD9 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.9□□□□□ -1.79
CLCF1Q9UBD9 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.9□□□□□ -1.79
CLCF1Q9UBD9 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CLCF1Q9UBD9 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 RNA5SP307-201ENST00000362863 116 ntBASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 AL034374.1-201ENST00000406329 351 ntBASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 RPS20P14-201ENST00000412545 360 ntBASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 CYCSP10-201ENST00000417973 294 ntBASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 AL590623.1-201ENST00000427864 105 ntBASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 AC004975.1-201ENST00000428733 208 ntBASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 CDY14P-201ENST00000431260 1014 ntBASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 CDY12P-201ENST00000440679 1015 ntBASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 CDY13P-201ENST00000445813 1015 ntBASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 AC073587.1-201ENST00000447093 876 ntBASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 NUTF2P3-201ENST00000448540 384 ntBASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 NPM1P39-201ENST00000449818 867 ntBASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 AC022431.1-201ENST00000450941 438 ntBASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 CDY23P-201ENST00000451661 1014 ntBASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 HGF-207ENST00000453018 721 ntTSL 3 BASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 NUTF2P7-201ENST00000453086 375 ntBASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 AC009963.2-201ENST00000453431 138 ntBASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 AL445433.1-201ENST00000457507 257 ntBASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 RPL35P6-201ENST00000490024 372 ntBASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 RN7SL691P-201ENST00000494487 301 ntBASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 AC021087.2-201ENST00000504656 1203 ntBASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 AC108475.1-201ENST00000507880 950 ntBASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 ATP1B1P1-201ENST00000509767 915 ntBASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 AC108157.1-201ENST00000510511 539 ntBASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 AC026616.1-201ENST00000523157 525 ntBASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 AP003730.1-201ENST00000524605 285 ntBASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 OR5BC1P-201ENST00000529327 739 ntBASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 CYCSP29-201ENST00000533731 318 ntBASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 TOMM20P2-201ENST00000540082 421 ntBASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 AC133552.5-201ENST00000604266 540 ntBASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 AC010201.1-201ENST00000605051 540 ntBASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 KATNBL1P1-201ENST00000605192 748 ntBASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 AC068831.8-201ENST00000620171 435 ntBASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 RPL23AP61-201ENST00000623642 466 ntBASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 ARHGAP42P1-201ENST00000507474 1976 ntBASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 AC104118.1-201ENST00000607625 1589 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms