Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.34□□□□□ -1.71
NDE1Q9NXR1 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.34□□□□□ -1.71
NDE1Q9NXR1 HAUS1P3-201ENST00000523909 662 ntBASIC4.34□□□□□ -1.71
NDE1Q9NXR1 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.34□□□□□ -1.71
NDE1Q9NXR1 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.34□□□□□ -1.71
NDE1Q9NXR1 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.34□□□□□ -1.71
NDE1Q9NXR1 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.34□□□□□ -1.71
NDE1Q9NXR1 RPL23AP97-201ENST00000568955 471 ntBASIC4.34□□□□□ -1.71
NDE1Q9NXR1 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.34□□□□□ -1.71
NDE1Q9NXR1 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.34□□□□□ -1.71
NDE1Q9NXR1 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.34□□□□□ -1.71
NDE1Q9NXR1 AC126175.1-201ENST00000617041 758 ntBASIC4.34□□□□□ -1.71
NDE1Q9NXR1 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.34□□□□□ -1.71
NDE1Q9NXR1 MIR6886-201ENST00000619864 61 ntBASIC4.34□□□□□ -1.71
NDE1Q9NXR1 AL445528.2-201ENST00000620582 470 ntBASIC4.34□□□□□ -1.71
NDE1Q9NXR1 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
NDE1Q9NXR1 AC090617.9-201ENST00000623751 147 ntBASIC4.34□□□□□ -1.71
NDE1Q9NXR1 FRG1DP-201ENST00000635586 771 ntBASIC4.34□□□□□ -1.71
NDE1Q9NXR1 AL359715.4-201ENST00000606629 1436 ntBASIC4.34□□□□□ -1.71
NDE1Q9NXR1 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.34□□□□□ -1.71
NDE1Q9NXR1 AC018555.1-201ENST00000567548 1980 ntBASIC4.34□□□□□ -1.71
NDE1Q9NXR1 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NDE1Q9NXR1 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.34□□□□□ -1.72
NDE1Q9NXR1 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
NDE1Q9NXR1 AC125257.1-201ENST00000560400 2930 ntBASIC4.34□□□□□ -1.72
NDE1Q9NXR1 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
NDE1Q9NXR1 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
NDE1Q9NXR1 MAPK10-253ENST00000641010 4072 ntBASIC4.33□□□□□ -1.72
NDE1Q9NXR1 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
NDE1Q9NXR1 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.33□□□□□ -1.72
NDE1Q9NXR1 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.33□□□□□ -1.72
NDE1Q9NXR1 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC4.33□□□□□ -1.72
NDE1Q9NXR1 RPL5P19-201ENST00000404228 893 ntBASIC4.33□□□□□ -1.72
NDE1Q9NXR1 ZNF603P-201ENST00000405613 487 ntBASIC4.33□□□□□ -1.72
NDE1Q9NXR1 STAT4-203ENST00000409995 709 ntTSL 5 BASIC4.33□□□□□ -1.72
NDE1Q9NXR1 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.33□□□□□ -1.72
NDE1Q9NXR1 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.33□□□□□ -1.72
NDE1Q9NXR1 RHOT1P3-201ENST00000436571 331 ntBASIC4.33□□□□□ -1.72
NDE1Q9NXR1 GSTA7P-201ENST00000438425 448 ntBASIC4.33□□□□□ -1.72
NDE1Q9NXR1 AC099063.2-201ENST00000446360 662 ntBASIC4.33□□□□□ -1.72
NDE1Q9NXR1 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.33□□□□□ -1.72
NDE1Q9NXR1 NDUFS5P3-201ENST00000450668 321 ntBASIC4.33□□□□□ -1.72
NDE1Q9NXR1 AC243772.1-201ENST00000451620 410 ntBASIC4.33□□□□□ -1.72
NDE1Q9NXR1 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.33□□□□□ -1.72
NDE1Q9NXR1 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.33□□□□□ -1.72
NDE1Q9NXR1 AL133477.1-201ENST00000457472 514 ntBASIC4.33□□□□□ -1.72
NDE1Q9NXR1 AC110749.1-201ENST00000462007 357 ntBASIC4.33□□□□□ -1.72
NDE1Q9NXR1 RPS4XP14-201ENST00000493072 781 ntBASIC4.33□□□□□ -1.72
NDE1Q9NXR1 AC119751.4-201ENST00000507498 357 ntBASIC4.33□□□□□ -1.72
NDE1Q9NXR1 AC017037.1-201ENST00000508460 471 ntBASIC4.33□□□□□ -1.72
NDE1Q9NXR1 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.33□□□□□ -1.72
NDE1Q9NXR1 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.33□□□□□ -1.72
NDE1Q9NXR1 SOX5P1-201ENST00000524155 1127 ntBASIC4.33□□□□□ -1.72
NDE1Q9NXR1 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.33□□□□□ -1.72
NDE1Q9NXR1 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
NDE1Q9NXR1 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.33□□□□□ -1.72
NDE1Q9NXR1 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.33□□□□□ -1.72
NDE1Q9NXR1 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.33□□□□□ -1.72
NDE1Q9NXR1 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.33□□□□□ -1.72
NDE1Q9NXR1 CD69-203ENST00000536709 1020 ntTSL 2 BASIC4.33□□□□□ -1.72
NDE1Q9NXR1 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.33□□□□□ -1.72
NDE1Q9NXR1 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.33□□□□□ -1.72
NDE1Q9NXR1 AC051619.2-201ENST00000559063 397 ntBASIC4.33□□□□□ -1.72
NDE1Q9NXR1 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.33□□□□□ -1.72
NDE1Q9NXR1 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.33□□□□□ -1.72
NDE1Q9NXR1 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC4.33□□□□□ -1.72
NDE1Q9NXR1 AC126365.2-201ENST00000580630 379 ntBASIC4.33□□□□□ -1.72
NDE1Q9NXR1 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.33□□□□□ -1.72
NDE1Q9NXR1 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.33□□□□□ -1.72
NDE1Q9NXR1 AC133794.1-201ENST00000602731 914 ntBASIC4.33□□□□□ -1.72
NDE1Q9NXR1 MTCO2P22-201ENST00000603246 681 ntBASIC4.33□□□□□ -1.72
NDE1Q9NXR1 AP004372.1-201ENST00000604842 844 ntBASIC4.33□□□□□ -1.72
NDE1Q9NXR1 AC093799.2-201ENST00000610062 578 ntBASIC4.33□□□□□ -1.72
NDE1Q9NXR1 MIR8084-201ENST00000614105 89 ntBASIC4.33□□□□□ -1.72
NDE1Q9NXR1 AL138955.1-201ENST00000622881 1040 ntBASIC4.33□□□□□ -1.72
NDE1Q9NXR1 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.33□□□□□ -1.72
NDE1Q9NXR1 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
NDE1Q9NXR1 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
NDE1Q9NXR1 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
NDE1Q9NXR1 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.33□□□□□ -1.72
NDE1Q9NXR1 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NDE1Q9NXR1 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.32□□□□□ -1.72
NDE1Q9NXR1 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
NDE1Q9NXR1 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NDE1Q9NXR1 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.32□□□□□ -1.72
NDE1Q9NXR1 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NDE1Q9NXR1 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
NDE1Q9NXR1 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.32□□□□□ -1.72
NDE1Q9NXR1 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.32□□□□□ -1.72
NDE1Q9NXR1 RNA5SP388-201ENST00000362584 119 ntBASIC4.32□□□□□ -1.72
NDE1Q9NXR1 RNU6-31P-201ENST00000384388 108 ntBASIC4.32□□□□□ -1.72
NDE1Q9NXR1 AC093719.1-202ENST00000392735 373 ntBASIC4.32□□□□□ -1.72
NDE1Q9NXR1 SDHCP2-201ENST00000398565 501 ntBASIC4.32□□□□□ -1.72
NDE1Q9NXR1 AL603766.1-201ENST00000407763 664 ntBASIC4.32□□□□□ -1.72
NDE1Q9NXR1 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.32□□□□□ -1.72
NDE1Q9NXR1 RNU4-27P-201ENST00000410889 139 ntBASIC4.32□□□□□ -1.72
NDE1Q9NXR1 RNA5SP306-201ENST00000411087 107 ntBASIC4.32□□□□□ -1.72
NDE1Q9NXR1 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.32□□□□□ -1.72
NDE1Q9NXR1 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.32□□□□□ -1.72
NDE1Q9NXR1 RAC1P3-201ENST00000416129 580 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms