Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 LAP3P1-201ENST00000403648 294 ntBASIC4.05□□□□□ -1.76
LRTM1Q9HBL6 AL121834.1-202ENST00000404494 277 ntBASIC4.05□□□□□ -1.76
LRTM1Q9HBL6 RN7SKP263-201ENST00000411194 309 ntBASIC4.05□□□□□ -1.76
LRTM1Q9HBL6 AC004552.1-201ENST00000419089 348 ntBASIC4.05□□□□□ -1.76
LRTM1Q9HBL6 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.05□□□□□ -1.76
LRTM1Q9HBL6 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.05□□□□□ -1.76
LRTM1Q9HBL6 AL357520.1-201ENST00000441557 453 ntBASIC4.05□□□□□ -1.76
LRTM1Q9HBL6 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.05□□□□□ -1.76
LRTM1Q9HBL6 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.05□□□□□ -1.76
LRTM1Q9HBL6 RPL7P32-201ENST00000457119 744 ntBASIC4.05□□□□□ -1.76
LRTM1Q9HBL6 MTND2P28-201ENST00000457540 1044 ntBASIC4.05□□□□□ -1.76
LRTM1Q9HBL6 RN7SL98P-201ENST00000462271 300 ntBASIC4.05□□□□□ -1.76
LRTM1Q9HBL6 RPS26P3-201ENST00000470205 348 ntBASIC4.05□□□□□ -1.76
LRTM1Q9HBL6 AC090543.2-201ENST00000483963 348 ntBASIC4.05□□□□□ -1.76
LRTM1Q9HBL6 AC004057.1-201ENST00000485827 348 ntBASIC4.05□□□□□ -1.76
LRTM1Q9HBL6 PPM1AP1-201ENST00000502740 1135 ntBASIC4.05□□□□□ -1.76
LRTM1Q9HBL6 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.05□□□□□ -1.76
LRTM1Q9HBL6 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.05□□□□□ -1.76
LRTM1Q9HBL6 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.05□□□□□ -1.76
LRTM1Q9HBL6 RNA5SP73-201ENST00000516744 108 ntBASIC4.05□□□□□ -1.76
LRTM1Q9HBL6 DUX4L52-201ENST00000549363 777 ntBASIC4.05□□□□□ -1.76
LRTM1Q9HBL6 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.05□□□□□ -1.76
LRTM1Q9HBL6 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.05□□□□□ -1.76
LRTM1Q9HBL6 AC090515.3-201ENST00000560431 315 ntBASIC4.05□□□□□ -1.76
LRTM1Q9HBL6 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.05□□□□□ -1.76
LRTM1Q9HBL6 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.05□□□□□ -1.76
LRTM1Q9HBL6 AC090948.1-201ENST00000607464 549 ntBASIC4.05□□□□□ -1.76
LRTM1Q9HBL6 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LRTM1Q9HBL6 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC4.05□□□□□ -1.76
LRTM1Q9HBL6 AL445363.3-201ENST00000623080 671 ntBASIC4.05□□□□□ -1.76
LRTM1Q9HBL6 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.05□□□□□ -1.76
LRTM1Q9HBL6 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.05□□□□□ -1.76
LRTM1Q9HBL6 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LRTM1Q9HBL6 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
LRTM1Q9HBL6 EIF2AP4-201ENST00000424793 1781 ntBASIC4.04□□□□□ -1.76
LRTM1Q9HBL6 AC016588.2-201ENST00000632484 3021 ntBASIC4.04□□□□□ -1.76
LRTM1Q9HBL6 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
LRTM1Q9HBL6 AC005332.5-201ENST00000591222 2919 ntBASIC4.04□□□□□ -1.76
LRTM1Q9HBL6 AC092162.3-201ENST00000624511 1624 ntBASIC4.04□□□□□ -1.76
LRTM1Q9HBL6 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
LRTM1Q9HBL6 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.04□□□□□ -1.76
LRTM1Q9HBL6 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LRTM1Q9HBL6 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.04□□□□□ -1.76
LRTM1Q9HBL6 RNA5SP36-201ENST00000410197 133 ntBASIC4.04□□□□□ -1.76
LRTM1Q9HBL6 EIF4A1P3-201ENST00000411521 244 ntBASIC4.04□□□□□ -1.76
LRTM1Q9HBL6 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.04□□□□□ -1.76
LRTM1Q9HBL6 MFSD13B-201ENST00000420133 1290 ntBASIC4.04□□□□□ -1.76
LRTM1Q9HBL6 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.04□□□□□ -1.76
LRTM1Q9HBL6 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.04□□□□□ -1.76
LRTM1Q9HBL6 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.04□□□□□ -1.76
LRTM1Q9HBL6 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.04□□□□□ -1.76
LRTM1Q9HBL6 EEF1A1P1-201ENST00000447052 739 ntBASIC4.04□□□□□ -1.76
LRTM1Q9HBL6 EIF2S2P2-201ENST00000447161 982 ntBASIC4.04□□□□□ -1.76
LRTM1Q9HBL6 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.04□□□□□ -1.76
LRTM1Q9HBL6 NUTF2P7-201ENST00000453086 375 ntBASIC4.04□□□□□ -1.76
LRTM1Q9HBL6 RN7SL810P-201ENST00000493031 276 ntBASIC4.04□□□□□ -1.76
LRTM1Q9HBL6 AL592156.1-201ENST00000508758 304 ntBASIC4.04□□□□□ -1.76
LRTM1Q9HBL6 OR8G5-201ENST00000524943 1041 ntBASIC4.04□□□□□ -1.76
LRTM1Q9HBL6 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.04□□□□□ -1.76
LRTM1Q9HBL6 QTRT1P1-201ENST00000604344 1078 ntBASIC4.04□□□□□ -1.76
LRTM1Q9HBL6 AL161637.1-201ENST00000622380 412 ntBASIC4.04□□□□□ -1.76
LRTM1Q9HBL6 BMS1P21-201ENST00000634565 365 ntBASIC4.04□□□□□ -1.76
LRTM1Q9HBL6 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
LRTM1Q9HBL6 AC139713.2-214ENST00000642059 1811 ntBASIC4.04□□□□□ -1.76
LRTM1Q9HBL6 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
LRTM1Q9HBL6 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
LRTM1Q9HBL6 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.04□□□□□ -1.76
LRTM1Q9HBL6 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
LRTM1Q9HBL6 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
LRTM1Q9HBL6 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
LRTM1Q9HBL6 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LRTM1Q9HBL6 AL137100.1-201ENST00000556703 1620 ntBASIC4.03□□□□□ -1.76
LRTM1Q9HBL6 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
LRTM1Q9HBL6 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
LRTM1Q9HBL6 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.03□□□□□ -1.76
LRTM1Q9HBL6 ZNF962P-201ENST00000443465 3140 ntBASIC4.03□□□□□ -1.76
LRTM1Q9HBL6 RNU1-14P-201ENST00000362759 152 ntBASIC4.03□□□□□ -1.76
LRTM1Q9HBL6 RNU1-64P-201ENST00000365443 163 ntBASIC4.03□□□□□ -1.76
LRTM1Q9HBL6 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
LRTM1Q9HBL6 RN7SKP235-201ENST00000410662 305 ntBASIC4.03□□□□□ -1.76
LRTM1Q9HBL6 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LRTM1Q9HBL6 CHIAP3-201ENST00000423668 1133 ntBASIC4.03□□□□□ -1.76
LRTM1Q9HBL6 RPL12P34-201ENST00000424532 479 ntBASIC4.03□□□□□ -1.76
LRTM1Q9HBL6 AC234779.1-201ENST00000425910 285 ntBASIC4.03□□□□□ -1.76
LRTM1Q9HBL6 AC122718.1-201ENST00000439448 744 ntBASIC4.03□□□□□ -1.76
LRTM1Q9HBL6 SERPINA7P1-201ENST00000443077 631 ntBASIC4.03□□□□□ -1.76
LRTM1Q9HBL6 AC044797.1-201ENST00000445744 679 ntBASIC4.03□□□□□ -1.76
LRTM1Q9HBL6 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.03□□□□□ -1.76
LRTM1Q9HBL6 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.03□□□□□ -1.76
LRTM1Q9HBL6 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.03□□□□□ -1.76
LRTM1Q9HBL6 FAM133DP-201ENST00000464802 691 ntBASIC4.03□□□□□ -1.76
LRTM1Q9HBL6 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.03□□□□□ -1.76
LRTM1Q9HBL6 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.03□□□□□ -1.76
LRTM1Q9HBL6 PGBD4P4-201ENST00000509673 613 ntBASIC4.03□□□□□ -1.76
LRTM1Q9HBL6 HNRNPKP5-201ENST00000515300 253 ntBASIC4.03□□□□□ -1.76
LRTM1Q9HBL6 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.03□□□□□ -1.76
LRTM1Q9HBL6 AP001804.2-201ENST00000533932 910 ntBASIC4.03□□□□□ -1.76
LRTM1Q9HBL6 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.03□□□□□ -1.76
LRTM1Q9HBL6 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.03□□□□□ -1.76
LRTM1Q9HBL6 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 136.6 ms