Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LRRC40Q9H9A6 AC009237.17-201ENST00000618111 748 ntBASIC4.48□□□□□ -1.69
LRRC40Q9H9A6 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.48□□□□□ -1.69
LRRC40Q9H9A6 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.48□□□□□ -1.69
LRRC40Q9H9A6 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LRRC40Q9H9A6 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.48□□□□□ -1.69
LRRC40Q9H9A6 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LRRC40Q9H9A6 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LRRC40Q9H9A6 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
LRRC40Q9H9A6 CCT8P1-201ENST00000413611 1657 ntBASIC4.48□□□□□ -1.69
LRRC40Q9H9A6 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.48□□□□□ -1.69
LRRC40Q9H9A6 AL592148.3-201ENST00000608771 2646 ntBASIC4.47□□□□□ -1.69
LRRC40Q9H9A6 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LRRC40Q9H9A6 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.47□□□□□ -1.69
LRRC40Q9H9A6 AC093311.1-201ENST00000506586 2021 ntBASIC4.47□□□□□ -1.69
LRRC40Q9H9A6 RNU1-15P-201ENST00000353977 144 ntBASIC4.47□□□□□ -1.69
LRRC40Q9H9A6 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
LRRC40Q9H9A6 MIR3065-201ENST00000390137 79 ntBASIC4.47□□□□□ -1.69
LRRC40Q9H9A6 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LRRC40Q9H9A6 GLULP6-201ENST00000399502 913 ntBASIC4.47□□□□□ -1.69
LRRC40Q9H9A6 RPS27AP11-201ENST00000402798 447 ntBASIC4.47□□□□□ -1.69
LRRC40Q9H9A6 AL121834.1-202ENST00000404494 277 ntBASIC4.47□□□□□ -1.69
LRRC40Q9H9A6 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.47□□□□□ -1.69
LRRC40Q9H9A6 AL160275.2-201ENST00000412010 394 ntBASIC4.47□□□□□ -1.69
LRRC40Q9H9A6 GSTM3P2-201ENST00000412746 530 ntBASIC4.47□□□□□ -1.69
LRRC40Q9H9A6 AL139128.1-201ENST00000413921 941 ntBASIC4.47□□□□□ -1.69
LRRC40Q9H9A6 EIF4EP1-201ENST00000422311 642 ntBASIC4.47□□□□□ -1.69
LRRC40Q9H9A6 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.47□□□□□ -1.69
LRRC40Q9H9A6 BRWD1P3-201ENST00000428816 390 ntBASIC4.47□□□□□ -1.69
LRRC40Q9H9A6 AL772161.1-201ENST00000439130 476 ntBASIC4.47□□□□□ -1.69
LRRC40Q9H9A6 RPL7P31-201ENST00000450192 724 ntBASIC4.47□□□□□ -1.69
LRRC40Q9H9A6 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.47□□□□□ -1.69
LRRC40Q9H9A6 AP002345.1-201ENST00000456493 928 ntBASIC4.47□□□□□ -1.69
LRRC40Q9H9A6 OR52A4P-201ENST00000472867 958 ntBASIC4.47□□□□□ -1.69
LRRC40Q9H9A6 RN7SL812P-201ENST00000493791 279 ntBASIC4.47□□□□□ -1.69
LRRC40Q9H9A6 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.47□□□□□ -1.69
LRRC40Q9H9A6 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.47□□□□□ -1.69
LRRC40Q9H9A6 PPBPP1-201ENST00000510807 373 ntBASIC4.47□□□□□ -1.69
LRRC40Q9H9A6 HMGB3P13-201ENST00000511263 607 ntBASIC4.47□□□□□ -1.69
LRRC40Q9H9A6 HMGB1P47-201ENST00000511281 589 ntBASIC4.47□□□□□ -1.69
LRRC40Q9H9A6 IGLV3-26-201ENST00000520756 302 ntBASIC4.47□□□□□ -1.69
LRRC40Q9H9A6 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.47□□□□□ -1.69
LRRC40Q9H9A6 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.47□□□□□ -1.69
LRRC40Q9H9A6 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.47□□□□□ -1.69
LRRC40Q9H9A6 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.47□□□□□ -1.69
LRRC40Q9H9A6 AP001160.4-201ENST00000596971 382 ntBASIC4.47□□□□□ -1.69
LRRC40Q9H9A6 AC008782.1-201ENST00000603386 430 ntBASIC4.47□□□□□ -1.69
LRRC40Q9H9A6 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.47□□□□□ -1.69
LRRC40Q9H9A6 AC024940.4-201ENST00000605507 246 ntBASIC4.47□□□□□ -1.69
LRRC40Q9H9A6 AL669942.2-201ENST00000620352 697 ntBASIC4.47□□□□□ -1.69
LRRC40Q9H9A6 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LRRC40Q9H9A6 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LRRC40Q9H9A6 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.47□□□□□ -1.69
LRRC40Q9H9A6 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LRRC40Q9H9A6 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.47□□□□□ -1.69
LRRC40Q9H9A6 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
LRRC40Q9H9A6 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
LRRC40Q9H9A6 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
LRRC40Q9H9A6 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.46□□□□□ -1.69
LRRC40Q9H9A6 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
LRRC40Q9H9A6 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.69
LRRC40Q9H9A6 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.69
LRRC40Q9H9A6 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.46□□□□□ -1.7
LRRC40Q9H9A6 OR56B2P-202ENST00000641377 2453 ntBASIC4.46□□□□□ -1.7
LRRC40Q9H9A6 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LRRC40Q9H9A6 RNU6-1279P-201ENST00000383917 103 ntBASIC4.46□□□□□ -1.7
LRRC40Q9H9A6 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LRRC40Q9H9A6 MTND4P11-201ENST00000417020 1058 ntBASIC4.46□□□□□ -1.7
LRRC40Q9H9A6 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.46□□□□□ -1.7
LRRC40Q9H9A6 RPL7AP25-201ENST00000423357 805 ntBASIC4.46□□□□□ -1.7
LRRC40Q9H9A6 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.46□□□□□ -1.7
LRRC40Q9H9A6 DYNLL1P7-201ENST00000429273 258 ntBASIC4.46□□□□□ -1.7
LRRC40Q9H9A6 RPEP2-201ENST00000432149 701 ntBASIC4.46□□□□□ -1.7
LRRC40Q9H9A6 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.46□□□□□ -1.7
LRRC40Q9H9A6 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.46□□□□□ -1.7
LRRC40Q9H9A6 MORF4L1P4-201ENST00000450245 976 ntBASIC4.46□□□□□ -1.7
LRRC40Q9H9A6 RPL5P30-201ENST00000465511 891 ntBASIC4.46□□□□□ -1.7
LRRC40Q9H9A6 AC053481.1-201ENST00000467217 306 ntBASIC4.46□□□□□ -1.7
LRRC40Q9H9A6 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.46□□□□□ -1.7
LRRC40Q9H9A6 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.46□□□□□ -1.7
LRRC40Q9H9A6 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.46□□□□□ -1.7
LRRC40Q9H9A6 OR5AN2P-201ENST00000534535 896 ntBASIC4.46□□□□□ -1.7
LRRC40Q9H9A6 AP006289.1-201ENST00000538089 277 ntBASIC4.46□□□□□ -1.7
LRRC40Q9H9A6 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.46□□□□□ -1.7
LRRC40Q9H9A6 AC084783.1-201ENST00000565846 910 ntBASIC4.46□□□□□ -1.7
LRRC40Q9H9A6 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.46□□□□□ -1.7
LRRC40Q9H9A6 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.46□□□□□ -1.7
LRRC40Q9H9A6 AC115286.1-201ENST00000604298 434 ntBASIC4.46□□□□□ -1.7
LRRC40Q9H9A6 AC073111.2-201ENST00000605657 1075 ntBASIC4.46□□□□□ -1.7
LRRC40Q9H9A6 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC4.46□□□□□ -1.7
LRRC40Q9H9A6 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
LRRC40Q9H9A6 AC015726.3-201ENST00000624501 418 ntBASIC4.46□□□□□ -1.7
LRRC40Q9H9A6 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
LRRC40Q9H9A6 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LRRC40Q9H9A6 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.46□□□□□ -1.7
LRRC40Q9H9A6 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.46□□□□□ -1.7
LRRC40Q9H9A6 AL118496.1-201ENST00000440201 1812 ntBASIC4.46□□□□□ -1.7
LRRC40Q9H9A6 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
LRRC40Q9H9A6 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
LRRC40Q9H9A6 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms