Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
UPF3BQ9BZI7 AC239798.3-201ENST00000454459 408 ntBASIC5.05□□□□□ -1.6
UPF3BQ9BZI7 RN7SL98P-201ENST00000462271 300 ntBASIC5.05□□□□□ -1.6
UPF3BQ9BZI7 AC091167.1-201ENST00000492017 396 ntBASIC5.05□□□□□ -1.6
UPF3BQ9BZI7 AC025554.1-201ENST00000505641 188 ntBASIC5.05□□□□□ -1.6
UPF3BQ9BZI7 AC006499.6-201ENST00000511169 607 ntBASIC5.05□□□□□ -1.6
UPF3BQ9BZI7 SNORA31.9-201ENST00000516429 84 ntBASIC5.05□□□□□ -1.6
UPF3BQ9BZI7 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.05□□□□□ -1.6
UPF3BQ9BZI7 MTCO1P49-201ENST00000523429 802 ntBASIC5.05□□□□□ -1.6
UPF3BQ9BZI7 AC010547.7-201ENST00000570323 333 ntBASIC5.05□□□□□ -1.6
UPF3BQ9BZI7 AC011477.5-201ENST00000586571 259 ntBASIC5.05□□□□□ -1.6
UPF3BQ9BZI7 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.05□□□□□ -1.6
UPF3BQ9BZI7 AC090948.1-201ENST00000607464 549 ntBASIC5.05□□□□□ -1.6
UPF3BQ9BZI7 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
UPF3BQ9BZI7 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
UPF3BQ9BZI7 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
UPF3BQ9BZI7 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
UPF3BQ9BZI7 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
UPF3BQ9BZI7 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
UPF3BQ9BZI7 DDX18P3-201ENST00000404856 2007 ntBASIC5.04□□□□□ -1.6
UPF3BQ9BZI7 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
UPF3BQ9BZI7 AC011266.1-201ENST00000624119 3569 ntBASIC5.04□□□□□ -1.6
UPF3BQ9BZI7 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.04□□□□□ -1.6
UPF3BQ9BZI7 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
UPF3BQ9BZI7 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.04□□□□□ -1.6
UPF3BQ9BZI7 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
UPF3BQ9BZI7 RNA5SP171-201ENST00000391071 115 ntBASIC5.04□□□□□ -1.6
UPF3BQ9BZI7 SNORA68.2-201ENST00000391263 128 ntBASIC5.04□□□□□ -1.6
UPF3BQ9BZI7 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.04□□□□□ -1.6
UPF3BQ9BZI7 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.04□□□□□ -1.6
UPF3BQ9BZI7 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.04□□□□□ -1.6
UPF3BQ9BZI7 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC5.04□□□□□ -1.6
UPF3BQ9BZI7 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.04□□□□□ -1.6
UPF3BQ9BZI7 RN7SL303P-201ENST00000469773 251 ntBASIC5.04□□□□□ -1.6
UPF3BQ9BZI7 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.04□□□□□ -1.6
UPF3BQ9BZI7 AC025674.1-201ENST00000507074 324 ntBASIC5.04□□□□□ -1.6
UPF3BQ9BZI7 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC5.04□□□□□ -1.6
UPF3BQ9BZI7 RPS27AP18-201ENST00000515536 459 ntBASIC5.04□□□□□ -1.6
UPF3BQ9BZI7 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.04□□□□□ -1.6
UPF3BQ9BZI7 MIR3138-201ENST00000585238 82 ntBASIC5.04□□□□□ -1.6
UPF3BQ9BZI7 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.04□□□□□ -1.6
UPF3BQ9BZI7 AC025175.1-201ENST00000606482 759 ntBASIC5.04□□□□□ -1.6
UPF3BQ9BZI7 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
UPF3BQ9BZI7 AP003497.2-201ENST00000624220 967 ntBASIC5.04□□□□□ -1.6
UPF3BQ9BZI7 AC140479.6-201ENST00000633535 357 ntBASIC5.04□□□□□ -1.6
UPF3BQ9BZI7 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
UPF3BQ9BZI7 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
UPF3BQ9BZI7 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
UPF3BQ9BZI7 EIF2AP4-201ENST00000424793 1781 ntBASIC5.04□□□□□ -1.6
UPF3BQ9BZI7 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
UPF3BQ9BZI7 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.03□□□□□ -1.6
UPF3BQ9BZI7 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.03□□□□□ -1.6
UPF3BQ9BZI7 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.03□□□□□ -1.6
UPF3BQ9BZI7 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
UPF3BQ9BZI7 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
UPF3BQ9BZI7 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
UPF3BQ9BZI7 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.03□□□□□ -1.6
UPF3BQ9BZI7 SNORA11.1-201ENST00000408133 129 ntBASIC5.03□□□□□ -1.6
UPF3BQ9BZI7 RNA5SP36-201ENST00000410197 133 ntBASIC5.03□□□□□ -1.6
UPF3BQ9BZI7 AC009237.5-201ENST00000414271 501 ntBASIC5.03□□□□□ -1.6
UPF3BQ9BZI7 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
UPF3BQ9BZI7 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.03□□□□□ -1.6
UPF3BQ9BZI7 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
UPF3BQ9BZI7 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
UPF3BQ9BZI7 NUTF2P3-201ENST00000448540 384 ntBASIC5.03□□□□□ -1.6
UPF3BQ9BZI7 RPL23AP24-201ENST00000458203 385 ntBASIC5.03□□□□□ -1.6
UPF3BQ9BZI7 AC010374.1-201ENST00000503762 1237 ntBASIC5.03□□□□□ -1.6
UPF3BQ9BZI7 RNA5SP519-201ENST00000516480 119 ntBASIC5.03□□□□□ -1.6
UPF3BQ9BZI7 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
UPF3BQ9BZI7 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC5.03□□□□□ -1.6
UPF3BQ9BZI7 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.03□□□□□ -1.6
UPF3BQ9BZI7 AC069240.1-201ENST00000548774 375 ntBASIC5.03□□□□□ -1.6
UPF3BQ9BZI7 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.03□□□□□ -1.6
UPF3BQ9BZI7 AC012603.1-201ENST00000606424 528 ntBASIC5.03□□□□□ -1.6
UPF3BQ9BZI7 AC009237.17-201ENST00000618111 748 ntBASIC5.03□□□□□ -1.6
UPF3BQ9BZI7 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.03□□□□□ -1.6
UPF3BQ9BZI7 AL158163.1-201ENST00000603915 1649 ntBASIC5.03□□□□□ -1.6
UPF3BQ9BZI7 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.03□□□□□ -1.6
UPF3BQ9BZI7 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
UPF3BQ9BZI7 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.03□□□□□ -1.6
UPF3BQ9BZI7 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
UPF3BQ9BZI7 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
UPF3BQ9BZI7 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
UPF3BQ9BZI7 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
UPF3BQ9BZI7 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
UPF3BQ9BZI7 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
UPF3BQ9BZI7 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
UPF3BQ9BZI7 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
UPF3BQ9BZI7 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
UPF3BQ9BZI7 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
UPF3BQ9BZI7 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.02□□□□□ -1.61
UPF3BQ9BZI7 AP000357.1-201ENST00000409926 1165 ntBASIC5.02□□□□□ -1.61
UPF3BQ9BZI7 RN7SKP235-201ENST00000410662 305 ntBASIC5.02□□□□□ -1.61
UPF3BQ9BZI7 AC013268.2-201ENST00000420753 337 ntBASIC5.02□□□□□ -1.61
UPF3BQ9BZI7 EIF1P3-201ENST00000423841 334 ntBASIC5.02□□□□□ -1.61
UPF3BQ9BZI7 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC5.02□□□□□ -1.61
UPF3BQ9BZI7 CBX1P1-201ENST00000440184 427 ntBASIC5.02□□□□□ -1.61
UPF3BQ9BZI7 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.02□□□□□ -1.61
UPF3BQ9BZI7 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.02□□□□□ -1.61
UPF3BQ9BZI7 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 147.3 ms