Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC3.88□□□□□ -1.79
RSPO3Q9BXY4 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
RSPO3Q9BXY4 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.88□□□□□ -1.79
RSPO3Q9BXY4 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RSPO3Q9BXY4 AP000756.2-201ENST00000624168 2567 ntBASIC3.88□□□□□ -1.79
RSPO3Q9BXY4 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 AC139713.2-214ENST00000642059 1811 ntBASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 RNU4-39P-201ENST00000362455 127 ntBASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 RNU6-1263P-201ENST00000384601 106 ntBASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 GTF2IP2-201ENST00000424290 697 ntBASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 MTCO1P54-201ENST00000430139 712 ntBASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 BX119904.1-201ENST00000432026 348 ntBASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 ELOCP18-201ENST00000434209 337 ntBASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 AP000936.3-201ENST00000438127 255 ntBASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 AL353748.1-201ENST00000440753 474 ntBASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 FHP1-201ENST00000442741 703 ntBASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 AL512326.1-201ENST00000443050 721 ntBASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 AL162388.1-201ENST00000450912 352 ntBASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 HMGB3P22-202ENST00000451823 572 ntBASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 AC041039.1-201ENST00000485656 536 ntBASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 PARP4P3-201ENST00000510265 317 ntBASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 KRT19P6-201ENST00000510983 209 ntBASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 snoU109.6-201ENST00000516831 118 ntBASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 OR5M7P-201ENST00000526140 972 ntBASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 AC068020.1-201ENST00000594215 661 ntBASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 AC020915.5-201ENST00000596836 964 ntBASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 AC067838.1-201ENST00000606064 577 ntBASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 AC025175.1-201ENST00000606482 759 ntBASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 AL158196.1-201ENST00000616786 434 ntBASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 AC002044.3-201ENST00000623314 541 ntBASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 AC140479.6-201ENST00000633535 357 ntBASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 MARK2P15-201ENST00000432204 2186 ntBASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.87□□□□□ -1.79
RSPO3Q9BXY4 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.86□□□□□ -1.79
RSPO3Q9BXY4 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
RSPO3Q9BXY4 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RSPO3Q9BXY4 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
RSPO3Q9BXY4 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RSPO3Q9BXY4 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.86□□□□□ -1.79
RSPO3Q9BXY4 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RSPO3Q9BXY4 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.86□□□□□ -1.79
RSPO3Q9BXY4 AL607077.1-201ENST00000401718 499 ntBASIC3.86□□□□□ -1.79
RSPO3Q9BXY4 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.86□□□□□ -1.79
RSPO3Q9BXY4 RPS12P5-201ENST00000423449 371 ntBASIC3.86□□□□□ -1.79
RSPO3Q9BXY4 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RSPO3Q9BXY4 RPS29P17-201ENST00000430795 166 ntBASIC3.86□□□□□ -1.79
RSPO3Q9BXY4 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.86□□□□□ -1.79
RSPO3Q9BXY4 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC3.86□□□□□ -1.79
RSPO3Q9BXY4 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.86□□□□□ -1.79
RSPO3Q9BXY4 PHBP16-201ENST00000446318 950 ntBASIC3.86□□□□□ -1.79
RSPO3Q9BXY4 AC026979.1-201ENST00000492525 396 ntBASIC3.86□□□□□ -1.79
RSPO3Q9BXY4 AC139783.2-201ENST00000504847 1145 ntBASIC3.86□□□□□ -1.79
RSPO3Q9BXY4 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC3.86□□□□□ -1.79
RSPO3Q9BXY4 RN7SKP122-201ENST00000515923 296 ntBASIC3.86□□□□□ -1.79
RSPO3Q9BXY4 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.86□□□□□ -1.79
RSPO3Q9BXY4 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.86□□□□□ -1.79
RSPO3Q9BXY4 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RSPO3Q9BXY4 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RSPO3Q9BXY4 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.86□□□□□ -1.79
RSPO3Q9BXY4 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC3.86□□□□□ -1.79
RSPO3Q9BXY4 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC3.86□□□□□ -1.79
RSPO3Q9BXY4 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.86□□□□□ -1.79
RSPO3Q9BXY4 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.86□□□□□ -1.79
RSPO3Q9BXY4 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RSPO3Q9BXY4 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC3.86□□□□□ -1.79
RSPO3Q9BXY4 AL161729.3-201ENST00000603533 673 ntBASIC3.86□□□□□ -1.79
RSPO3Q9BXY4 AC020910.2-201ENST00000603635 610 ntBASIC3.86□□□□□ -1.79
RSPO3Q9BXY4 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RSPO3Q9BXY4 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.86□□□□□ -1.79
RSPO3Q9BXY4 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.86□□□□□ -1.79
RSPO3Q9BXY4 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms