Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RPRD1AQ96P16 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
RPRD1AQ96P16 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
RPRD1AQ96P16 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.53□□□□□ -1.68
RPRD1AQ96P16 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
RPRD1AQ96P16 IL6STP1-201ENST00000346911 1020 ntBASIC4.53□□□□□ -1.68
RPRD1AQ96P16 RNU1-44P-201ENST00000384453 163 ntBASIC4.53□□□□□ -1.68
RPRD1AQ96P16 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
RPRD1AQ96P16 RNU4-25P-201ENST00000410569 230 ntBASIC4.53□□□□□ -1.68
RPRD1AQ96P16 RNU6-603P-201ENST00000411403 107 ntBASIC4.53□□□□□ -1.68
RPRD1AQ96P16 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RPRD1AQ96P16 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.53□□□□□ -1.68
RPRD1AQ96P16 AC023141.6-201ENST00000429418 337 ntBASIC4.53□□□□□ -1.68
RPRD1AQ96P16 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.53□□□□□ -1.68
RPRD1AQ96P16 MTCYBP29-201ENST00000436327 1006 ntBASIC4.53□□□□□ -1.68
RPRD1AQ96P16 AC114495.1-201ENST00000441274 436 ntBASIC4.53□□□□□ -1.68
RPRD1AQ96P16 RPL7P33-201ENST00000444159 742 ntBASIC4.53□□□□□ -1.68
RPRD1AQ96P16 ATP5G1P3-201ENST00000463301 410 ntBASIC4.53□□□□□ -1.68
RPRD1AQ96P16 RPL23AP65-201ENST00000475608 468 ntBASIC4.53□□□□□ -1.68
RPRD1AQ96P16 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC4.53□□□□□ -1.68
RPRD1AQ96P16 ATP1B1P1-201ENST00000509767 915 ntBASIC4.53□□□□□ -1.68
RPRD1AQ96P16 VWA8P1-201ENST00000510889 176 ntBASIC4.53□□□□□ -1.68
RPRD1AQ96P16 AC067904.2-201ENST00000517322 1283 ntBASIC4.53□□□□□ -1.68
RPRD1AQ96P16 AC090819.1-201ENST00000523800 1111 ntBASIC4.53□□□□□ -1.68
RPRD1AQ96P16 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.53□□□□□ -1.68
RPRD1AQ96P16 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.53□□□□□ -1.68
RPRD1AQ96P16 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.53□□□□□ -1.68
RPRD1AQ96P16 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RPRD1AQ96P16 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.53□□□□□ -1.68
RPRD1AQ96P16 RPL7P50-201ENST00000600588 727 ntBASIC4.53□□□□□ -1.68
RPRD1AQ96P16 AC113403.1-201ENST00000604910 193 ntBASIC4.53□□□□□ -1.68
RPRD1AQ96P16 AC010201.1-201ENST00000605051 540 ntBASIC4.53□□□□□ -1.68
RPRD1AQ96P16 Z98200.1-201ENST00000607298 470 ntBASIC4.53□□□□□ -1.68
RPRD1AQ96P16 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
RPRD1AQ96P16 uc_338.13-201ENST00000618243 179 ntBASIC4.53□□□□□ -1.68
RPRD1AQ96P16 AC007546.2-201ENST00000623996 360 ntBASIC4.53□□□□□ -1.68
RPRD1AQ96P16 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RPRD1AQ96P16 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RPRD1AQ96P16 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
RPRD1AQ96P16 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.53□□□□□ -1.68
RPRD1AQ96P16 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RPRD1AQ96P16 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.53□□□□□ -1.68
RPRD1AQ96P16 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
RPRD1AQ96P16 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RPRD1AQ96P16 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.52□□□□□ -1.69
RPRD1AQ96P16 AL049555.1-201ENST00000562834 1933 ntBASIC4.52□□□□□ -1.69
RPRD1AQ96P16 EOGT-210ENST00000615922 1931 ntBASIC4.52□□□□□ -1.69
RPRD1AQ96P16 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.52□□□□□ -1.69
RPRD1AQ96P16 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
RPRD1AQ96P16 OR4K17-201ENST00000315543 1032 ntBASIC4.52□□□□□ -1.69
RPRD1AQ96P16 AC126755.2-208ENST00000327792 462 ntBASIC4.52□□□□□ -1.69
RPRD1AQ96P16 AC138969.1-213ENST00000331436 462 ntBASIC4.52□□□□□ -1.69
RPRD1AQ96P16 RNA5SP307-201ENST00000362863 116 ntBASIC4.52□□□□□ -1.69
RPRD1AQ96P16 AC240504.1-201ENST00000395709 845 ntBASIC4.52□□□□□ -1.69
RPRD1AQ96P16 ST13P16-201ENST00000401760 781 ntBASIC4.52□□□□□ -1.69
RPRD1AQ96P16 AL603766.1-201ENST00000407763 664 ntBASIC4.52□□□□□ -1.69
RPRD1AQ96P16 RNU6-564P-201ENST00000410983 104 ntBASIC4.52□□□□□ -1.69
RPRD1AQ96P16 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.52□□□□□ -1.69
RPRD1AQ96P16 AL139095.3-201ENST00000419672 1203 ntBASIC4.52□□□□□ -1.69
RPRD1AQ96P16 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.52□□□□□ -1.69
RPRD1AQ96P16 C4BPAP2-201ENST00000428434 478 ntBASIC4.52□□□□□ -1.69
RPRD1AQ96P16 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.52□□□□□ -1.69
RPRD1AQ96P16 RPS3AP54-201ENST00000435535 734 ntBASIC4.52□□□□□ -1.69
RPRD1AQ96P16 AC092013.1-201ENST00000438795 332 ntBASIC4.52□□□□□ -1.69
RPRD1AQ96P16 IFNWP4-201ENST00000453148 294 ntBASIC4.52□□□□□ -1.69
RPRD1AQ96P16 EIF2S2P4-201ENST00000461070 984 ntBASIC4.52□□□□□ -1.69
RPRD1AQ96P16 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
RPRD1AQ96P16 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.52□□□□□ -1.69
RPRD1AQ96P16 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.52□□□□□ -1.69
RPRD1AQ96P16 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.52□□□□□ -1.69
RPRD1AQ96P16 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RPRD1AQ96P16 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RPRD1AQ96P16 AC090515.3-201ENST00000560431 315 ntBASIC4.52□□□□□ -1.69
RPRD1AQ96P16 HNRNPCP4-201ENST00000571636 900 ntBASIC4.52□□□□□ -1.69
RPRD1AQ96P16 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC4.52□□□□□ -1.69
RPRD1AQ96P16 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.52□□□□□ -1.69
RPRD1AQ96P16 MTCO2P22-201ENST00000603246 681 ntBASIC4.52□□□□□ -1.69
RPRD1AQ96P16 AC084373.1-201ENST00000603311 235 ntBASIC4.52□□□□□ -1.69
RPRD1AQ96P16 HMGB1P51-201ENST00000605166 638 ntBASIC4.52□□□□□ -1.69
RPRD1AQ96P16 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.52□□□□□ -1.69
RPRD1AQ96P16 MIR6758-201ENST00000620653 63 ntBASIC4.52□□□□□ -1.69
RPRD1AQ96P16 AC011944.2-201ENST00000624440 683 ntBASIC4.52□□□□□ -1.69
RPRD1AQ96P16 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.52□□□□□ -1.69
RPRD1AQ96P16 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
RPRD1AQ96P16 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.52□□□□□ -1.69
RPRD1AQ96P16 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RPRD1AQ96P16 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RPRD1AQ96P16 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RPRD1AQ96P16 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.52□□□□□ -1.69
RPRD1AQ96P16 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.52□□□□□ -1.69
RPRD1AQ96P16 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.51□□□□□ -1.69
RPRD1AQ96P16 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RPRD1AQ96P16 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.51□□□□□ -1.69
RPRD1AQ96P16 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
RPRD1AQ96P16 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
RPRD1AQ96P16 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
RPRD1AQ96P16 RPL32P3-201ENST00000359025 275 ntBASIC4.51□□□□□ -1.69
RPRD1AQ96P16 GCNT6-201ENST00000379591 934 ntBASIC4.51□□□□□ -1.69
RPRD1AQ96P16 RNU6-146P-201ENST00000384602 108 ntBASIC4.51□□□□□ -1.69
RPRD1AQ96P16 AL139039.2-201ENST00000407436 479 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms