Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
AP3S1Q92572 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
AP3S1Q92572 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
AP3S1Q92572 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
AP3S1Q92572 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
AP3S1Q92572 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
AP3S1Q92572 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC3.68□□□□□ -1.82
AP3S1Q92572 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.68□□□□□ -1.82
AP3S1Q92572 SNORA37-201ENST00000384504 129 ntBASIC3.68□□□□□ -1.82
AP3S1Q92572 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
AP3S1Q92572 HMGN2P8-201ENST00000391458 268 ntBASIC3.68□□□□□ -1.82
AP3S1Q92572 AL031985.1-201ENST00000392713 418 ntBASIC3.68□□□□□ -1.82
AP3S1Q92572 CHMP1B2P-201ENST00000399581 597 ntBASIC3.68□□□□□ -1.82
AP3S1Q92572 AC097374.1-203ENST00000400783 485 ntBASIC3.68□□□□□ -1.82
AP3S1Q92572 VN1R12P-201ENST00000403778 876 ntBASIC3.68□□□□□ -1.82
AP3S1Q92572 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
AP3S1Q92572 RPL31P52-201ENST00000407532 367 ntBASIC3.68□□□□□ -1.82
AP3S1Q92572 RPL23AP26-201ENST00000412728 464 ntBASIC3.68□□□□□ -1.82
AP3S1Q92572 AP001324.1-201ENST00000428553 399 ntBASIC3.68□□□□□ -1.82
AP3S1Q92572 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
AP3S1Q92572 USP9YP7-201ENST00000436723 430 ntBASIC3.68□□□□□ -1.82
AP3S1Q92572 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC3.68□□□□□ -1.82
AP3S1Q92572 AL500522.2-201ENST00000448562 343 ntBASIC3.68□□□□□ -1.82
AP3S1Q92572 USP9YP32-201ENST00000452432 430 ntBASIC3.68□□□□□ -1.82
AP3S1Q92572 ANP32BP2-201ENST00000454525 545 ntBASIC3.68□□□□□ -1.82
AP3S1Q92572 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.68□□□□□ -1.82
AP3S1Q92572 AC023141.9-201ENST00000458734 412 ntBASIC3.68□□□□□ -1.82
AP3S1Q92572 RN7SL93P-201ENST00000463035 293 ntBASIC3.68□□□□□ -1.82
AP3S1Q92572 RPL7AP6-201ENST00000477943 801 ntBASIC3.68□□□□□ -1.82
AP3S1Q92572 AC109462.1-201ENST00000491087 368 ntBASIC3.68□□□□□ -1.82
AP3S1Q92572 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.68□□□□□ -1.82
AP3S1Q92572 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.68□□□□□ -1.82
AP3S1Q92572 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.68□□□□□ -1.82
AP3S1Q92572 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.68□□□□□ -1.82
AP3S1Q92572 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
AP3S1Q92572 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC3.68□□□□□ -1.82
AP3S1Q92572 AC234775.3-201ENST00000564612 656 ntBASIC3.68□□□□□ -1.82
AP3S1Q92572 AC007599.1-201ENST00000568688 1174 ntBASIC3.68□□□□□ -1.82
AP3S1Q92572 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC3.68□□□□□ -1.82
AP3S1Q92572 AC006116.3-201ENST00000592968 361 ntBASIC3.68□□□□□ -1.82
AP3S1Q92572 AC007546.1-201ENST00000619452 559 ntBASIC3.68□□□□□ -1.82
AP3S1Q92572 AL512356.3-201ENST00000623005 461 ntBASIC3.68□□□□□ -1.82
AP3S1Q92572 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.68□□□□□ -1.82
AP3S1Q92572 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
AP3S1Q92572 AC007342.7-201ENST00000624610 2337 ntBASIC3.68□□□□□ -1.82
AP3S1Q92572 AL021368.2-201ENST00000606125 5352 ntBASIC3.68□□□□□ -1.82
AP3S1Q92572 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.68□□□□□ -1.82
AP3S1Q92572 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
AP3S1Q92572 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
AP3S1Q92572 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
AP3S1Q92572 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.68□□□□□ -1.82
AP3S1Q92572 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
AP3S1Q92572 MAPK10-372ENST00000641954 3413 ntBASIC3.67□□□□□ -1.82
AP3S1Q92572 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.67□□□□□ -1.82
AP3S1Q92572 AC066616.2-201ENST00000559334 1481 ntBASIC3.67□□□□□ -1.82
AP3S1Q92572 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
AP3S1Q92572 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.67□□□□□ -1.82
AP3S1Q92572 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
AP3S1Q92572 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
AP3S1Q92572 RNU1-18P-201ENST00000363062 164 ntBASIC3.67□□□□□ -1.82
AP3S1Q92572 RNU1-87P-201ENST00000363727 170 ntBASIC3.67□□□□□ -1.82
AP3S1Q92572 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
AP3S1Q92572 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.67□□□□□ -1.82
AP3S1Q92572 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
AP3S1Q92572 RNU4-34P-201ENST00000410431 124 ntBASIC3.67□□□□□ -1.82
AP3S1Q92572 PGBD4P8-201ENST00000412993 562 ntBASIC3.67□□□□□ -1.82
AP3S1Q92572 RPS12P23-201ENST00000419579 400 ntBASIC3.67□□□□□ -1.82
AP3S1Q92572 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.67□□□□□ -1.82
AP3S1Q92572 AL121776.1-201ENST00000429337 372 ntBASIC3.67□□□□□ -1.82
AP3S1Q92572 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.67□□□□□ -1.82
AP3S1Q92572 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.67□□□□□ -1.82
AP3S1Q92572 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC3.67□□□□□ -1.82
AP3S1Q92572 AC092809.1-201ENST00000441469 474 ntBASIC3.67□□□□□ -1.82
AP3S1Q92572 UBE2V2P4-201ENST00000447495 259 ntBASIC3.67□□□□□ -1.82
AP3S1Q92572 DNAJC19P1-201ENST00000455312 319 ntBASIC3.67□□□□□ -1.82
AP3S1Q92572 RPL36AP13-201ENST00000457490 317 ntBASIC3.67□□□□□ -1.82
AP3S1Q92572 RN7SL168P-201ENST00000463821 279 ntBASIC3.67□□□□□ -1.82
AP3S1Q92572 RN7SL738P-201ENST00000470264 297 ntBASIC3.67□□□□□ -1.82
AP3S1Q92572 PFN1P8-201ENST00000497012 543 ntBASIC3.67□□□□□ -1.82
AP3S1Q92572 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.67□□□□□ -1.82
AP3S1Q92572 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC3.67□□□□□ -1.82
AP3S1Q92572 CDV3-208ENST00000511392 554 ntTSL 5 BASIC3.67□□□□□ -1.82
AP3S1Q92572 AC108471.1-201ENST00000513977 287 ntBASIC3.67□□□□□ -1.82
AP3S1Q92572 RNA5SP362-201ENST00000516048 118 ntBASIC3.67□□□□□ -1.82
AP3S1Q92572 RN7SKP276-201ENST00000516242 268 ntBASIC3.67□□□□□ -1.82
AP3S1Q92572 RNA5SP473-201ENST00000516402 125 ntBASIC3.67□□□□□ -1.82
AP3S1Q92572 RNA5SP73-201ENST00000516744 108 ntBASIC3.67□□□□□ -1.82
AP3S1Q92572 OR5M2P-201ENST00000529003 936 ntBASIC3.67□□□□□ -1.82
AP3S1Q92572 OR4C2P-201ENST00000530855 1064 ntBASIC3.67□□□□□ -1.82
AP3S1Q92572 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
AP3S1Q92572 AL161713.1-201ENST00000555538 145 ntBASIC3.67□□□□□ -1.82
AP3S1Q92572 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.67□□□□□ -1.82
AP3S1Q92572 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.67□□□□□ -1.82
AP3S1Q92572 AL512782.1-201ENST00000603093 364 ntBASIC3.67□□□□□ -1.82
AP3S1Q92572 AC025175.1-201ENST00000606482 759 ntBASIC3.67□□□□□ -1.82
AP3S1Q92572 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.67□□□□□ -1.82
AP3S1Q92572 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC3.67□□□□□ -1.82
AP3S1Q92572 AC023043.4-201ENST00000612081 449 ntBASIC3.67□□□□□ -1.82
AP3S1Q92572 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.67□□□□□ -1.82
AP3S1Q92572 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms