Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 RNU6ATAC18P-201ENST00000408413 101 ntBASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 RN7SKP267-201ENST00000410381 285 ntBASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 RPL12P43-201ENST00000420608 499 ntBASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 TEX41-204ENST00000423031 491 ntTSL 4 BASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 EIF1P3-201ENST00000423841 334 ntBASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 RPL7P46-201ENST00000425129 740 ntBASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 IFNNP1-201ENST00000429219 553 ntBASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 MTCO1P43-201ENST00000431831 488 ntBASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 NEK4P1-201ENST00000433383 879 ntBASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 HMGN1P32-201ENST00000441744 256 ntBASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 AL353898.1-201ENST00000444055 238 ntBASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 NPM1P49-201ENST00000448027 714 ntBASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 U3.44-201ENST00000458938 192 ntBASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 RN7SL319P-201ENST00000480656 221 ntBASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 AC092185.1-201ENST00000491371 97 ntBASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 AC112484.3-201ENST00000505910 329 ntBASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 OR5H7P-201ENST00000514084 930 ntBASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 OR7E128P-201ENST00000532736 1024 ntBASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 TRAV37-201ENST00000553906 342 ntBASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 AC121758.1-202ENST00000556917 658 ntBASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 AC037471.2-201ENST00000564941 598 ntBASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 BNIP3P32-201ENST00000600015 554 ntBASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 AC091167.5-201ENST00000605689 894 ntBASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 MIR6070-201ENST00000613967 103 ntBASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC2.29□□□□□ -2.04
SPTSSBQ8NFR3 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 MTND5P27-201ENST00000428871 1720 ntBASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 LINC00561-201ENST00000565815 2738 ntBASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 AC108467.2-201ENST00000617640 1597 ntBASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 RNA5SP295-201ENST00000362655 121 ntBASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 RN7SKP222-201ENST00000410651 315 ntBASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 SNORA74C-2-201ENST00000411179 201 ntBASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 AL591848.1-201ENST00000413092 322 ntBASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 EEF1B2P8-201ENST00000414101 671 ntBASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 LIPT1P1-201ENST00000415870 1186 ntBASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 AL161631.1-201ENST00000417933 486 ntBASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 AF186996.5-201ENST00000418098 904 ntBASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 BX323845.3-201ENST00000428215 527 ntBASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 AC000111.2-201ENST00000448200 210 ntBASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 RPL7P45-201ENST00000455851 743 ntBASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 RPS4XP22-201ENST00000480755 780 ntBASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 EIF1P7-201ENST00000487533 337 ntBASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 AC021146.5-201ENST00000503544 545 ntBASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 BTF3L4P4-201ENST00000506381 449 ntBASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 AC018797.1-201ENST00000510791 255 ntBASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 RNA5SP373-201ENST00000517271 95 ntBASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 AC079905.1-201ENST00000549280 475 ntBASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC2.28□□□□□ -2.04
SPTSSBQ8NFR3 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms