Protein–RNA interactions for Protein: Q8NEV1

CSNK2A3, Casein kinase II subunit alpha 3, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A3Q8NEV1 MTND3P12-201ENST00000559068 328 ntBASIC4.44□□□□□ -1.7
CSNK2A3Q8NEV1 AC090888.2-201ENST00000559765 1144 ntBASIC4.44□□□□□ -1.7
CSNK2A3Q8NEV1 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC4.44□□□□□ -1.7
CSNK2A3Q8NEV1 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.44□□□□□ -1.7
CSNK2A3Q8NEV1 MTND4LP24-201ENST00000572277 291 ntBASIC4.44□□□□□ -1.7
CSNK2A3Q8NEV1 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.44□□□□□ -1.7
CSNK2A3Q8NEV1 MIR5708-201ENST00000579723 85 ntBASIC4.44□□□□□ -1.7
CSNK2A3Q8NEV1 AC090312.1-201ENST00000580637 348 ntBASIC4.44□□□□□ -1.7
CSNK2A3Q8NEV1 AC011840.5-201ENST00000582125 771 ntBASIC4.44□□□□□ -1.7
CSNK2A3Q8NEV1 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.44□□□□□ -1.7
CSNK2A3Q8NEV1 AC090312.2-201ENST00000582687 378 ntBASIC4.44□□□□□ -1.7
CSNK2A3Q8NEV1 AC115085.1-201ENST00000588924 229 ntBASIC4.44□□□□□ -1.7
CSNK2A3Q8NEV1 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC4.44□□□□□ -1.7
CSNK2A3Q8NEV1 AC011445.2-201ENST00000599274 173 ntBASIC4.44□□□□□ -1.7
CSNK2A3Q8NEV1 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.44□□□□□ -1.7
CSNK2A3Q8NEV1 NTAN1P1-201ENST00000603150 646 ntBASIC4.44□□□□□ -1.7
CSNK2A3Q8NEV1 AL357094.1-201ENST00000603845 844 ntBASIC4.44□□□□□ -1.7
CSNK2A3Q8NEV1 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.44□□□□□ -1.7
CSNK2A3Q8NEV1 AL445423.1-201ENST00000609941 536 ntBASIC4.44□□□□□ -1.7
CSNK2A3Q8NEV1 AC109309.2-201ENST00000612597 332 ntBASIC4.44□□□□□ -1.7
CSNK2A3Q8NEV1 AL355493.4-201ENST00000618530 292 ntBASIC4.44□□□□□ -1.7
CSNK2A3Q8NEV1 BX005214.3-202ENST00000619809 325 ntBASIC4.44□□□□□ -1.7
CSNK2A3Q8NEV1 AP002791.1-201ENST00000623291 381 ntBASIC4.44□□□□□ -1.7
CSNK2A3Q8NEV1 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.44□□□□□ -1.7
CSNK2A3Q8NEV1 AC136428.4-201ENST00000634254 1155 ntBASIC4.44□□□□□ -1.7
CSNK2A3Q8NEV1 AC000367.1-201ENST00000452711 1766 ntBASIC4.44□□□□□ -1.7
CSNK2A3Q8NEV1 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.44□□□□□ -1.7
CSNK2A3Q8NEV1 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CSNK2A3Q8NEV1 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CSNK2A3Q8NEV1 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
CSNK2A3Q8NEV1 CASC19-206ENST00000641028 1430 ntBASIC4.44□□□□□ -1.7
CSNK2A3Q8NEV1 AC025574.1-201ENST00000554784 1653 ntBASIC4.44□□□□□ -1.7
CSNK2A3Q8NEV1 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CSNK2A3Q8NEV1 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.44□□□□□ -1.7
CSNK2A3Q8NEV1 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CSNK2A3Q8NEV1 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CSNK2A3Q8NEV1 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CSNK2A3Q8NEV1 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 MAPK10-304ENST00000641341 3984 ntBASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 AL078599.1-201ENST00000402075 293 ntBASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 RNU6-603P-201ENST00000411403 107 ntBASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 NPM1P4-201ENST00000414095 812 ntBASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 RPL22P18-201ENST00000417197 377 ntBASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 RPL21P110-201ENST00000433345 446 ntBASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 AC084290.1-201ENST00000434995 374 ntBASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 RPL12P46-201ENST00000436610 195 ntBASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 MTND1P31-201ENST00000449206 961 ntBASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 OTX2P1-201ENST00000450956 354 ntBASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 RN7SL443P-201ENST00000464331 290 ntBASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 RPL23AP44-201ENST00000482216 473 ntBASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 PGBD4P4-201ENST00000509673 613 ntBASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 AC092593.2-201ENST00000513866 913 ntBASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 RN7SKP283-201ENST00000517197 270 ntBASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 COX6B1P6-201ENST00000522347 255 ntBASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 IGKV2-18-201ENST00000522607 343 ntBASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 IGKV3D-34-201ENST00000522638 302 ntBASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 AC090515.3-201ENST00000560431 315 ntBASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 NDUFB4P11-201ENST00000560510 395 ntBASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 AC009097.3-201ENST00000563557 1018 ntBASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 AC012146.2-201ENST00000576545 416 ntBASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 FKBP1AP1-201ENST00000594588 318 ntBASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 AC245036.5-201ENST00000596330 847 ntBASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 AC095055.1-201ENST00000603472 1113 ntBASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 AL353726.1-201ENST00000614041 1000 ntBASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 AC108359.1-201ENST00000616451 1211 ntBASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 AC073869.10-201ENST00000642016 354 ntBASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 AC000123.3-201ENST00000624029 4975 ntBASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
CSNK2A3Q8NEV1 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms