Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AC124068.1-201ENST00000563131 678 ntBASIC5.13□□□□□ -1.59
RTL9Q8NET4 MIR5684-201ENST00000585074 65 ntBASIC5.13□□□□□ -1.59
RTL9Q8NET4 SLC25A36P1-201ENST00000590111 465 ntBASIC5.13□□□□□ -1.59
RTL9Q8NET4 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.13□□□□□ -1.59
RTL9Q8NET4 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.13□□□□□ -1.59
RTL9Q8NET4 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RTL9Q8NET4 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.12□□□□□ -1.59
RTL9Q8NET4 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RTL9Q8NET4 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
RTL9Q8NET4 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.12□□□□□ -1.59
RTL9Q8NET4 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RTL9Q8NET4 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC5.12□□□□□ -1.59
RTL9Q8NET4 ERCC6-202ENST00000374127 1782 ntBASIC5.12□□□□□ -1.59
RTL9Q8NET4 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RTL9Q8NET4 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RTL9Q8NET4 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.12□□□□□ -1.59
RTL9Q8NET4 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.12□□□□□ -1.59
RTL9Q8NET4 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
RTL9Q8NET4 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RTL9Q8NET4 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.12□□□□□ -1.59
RTL9Q8NET4 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.12□□□□□ -1.59
RTL9Q8NET4 EED-206ENST00000527888 1422 ntTSL 2 BASIC5.12□□□□□ -1.59
RTL9Q8NET4 AL161631.1-201ENST00000417933 486 ntBASIC5.12□□□□□ -1.59
RTL9Q8NET4 GOT2P5-201ENST00000433995 546 ntBASIC5.12□□□□□ -1.59
RTL9Q8NET4 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.12□□□□□ -1.59
RTL9Q8NET4 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC5.12□□□□□ -1.59
RTL9Q8NET4 AC233702.9-201ENST00000581528 203 ntBASIC5.12□□□□□ -1.59
RTL9Q8NET4 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.12□□□□□ -1.59
RTL9Q8NET4 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.12□□□□□ -1.59
RTL9Q8NET4 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.12□□□□□ -1.59
RTL9Q8NET4 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC5.12□□□□□ -1.59
RTL9Q8NET4 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.12□□□□□ -1.59
RTL9Q8NET4 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.12□□□□□ -1.59
RTL9Q8NET4 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RTL9Q8NET4 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RTL9Q8NET4 AC027290.2-201ENST00000623210 18662 ntBASIC5.11□□□□□ -1.59
RTL9Q8NET4 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RTL9Q8NET4 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RTL9Q8NET4 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
RTL9Q8NET4 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.11□□□□□ -1.59
RTL9Q8NET4 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
RTL9Q8NET4 RNU6-761P-201ENST00000384148 107 ntBASIC5.11□□□□□ -1.59
RTL9Q8NET4 RNA5SP372-201ENST00000390836 115 ntBASIC5.11□□□□□ -1.59
RTL9Q8NET4 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RTL9Q8NET4 HSPE1P12-201ENST00000412576 301 ntBASIC5.11□□□□□ -1.59
RTL9Q8NET4 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC5.11□□□□□ -1.59
RTL9Q8NET4 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.11□□□□□ -1.59
RTL9Q8NET4 SKP1P3-201ENST00000429280 487 ntBASIC5.11□□□□□ -1.59
RTL9Q8NET4 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC5.11□□□□□ -1.59
RTL9Q8NET4 RPL6P5-201ENST00000445678 828 ntBASIC5.11□□□□□ -1.59
RTL9Q8NET4 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.11□□□□□ -1.59
RTL9Q8NET4 RFPL4AP5-201ENST00000514977 504 ntBASIC5.11□□□□□ -1.59
RTL9Q8NET4 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.11□□□□□ -1.59
RTL9Q8NET4 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.11□□□□□ -1.59
RTL9Q8NET4 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.11□□□□□ -1.59
RTL9Q8NET4 AC114878.2-201ENST00000604863 1251 ntBASIC5.11□□□□□ -1.59
RTL9Q8NET4 AL138721.1-201ENST00000616756 179 ntBASIC5.11□□□□□ -1.59
RTL9Q8NET4 CR392039.5-201ENST00000623201 510 ntBASIC5.11□□□□□ -1.59
RTL9Q8NET4 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
RTL9Q8NET4 Z82217.1-201ENST00000625157 8149 ntBASIC5.11□□□□□ -1.59
RTL9Q8NET4 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.11□□□□□ -1.59
RTL9Q8NET4 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.11□□□□□ -1.59
RTL9Q8NET4 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RTL9Q8NET4 AC093591.2-201ENST00000565254 3843 ntBASIC5.11□□□□□ -1.59
RTL9Q8NET4 AL513548.1-201ENST00000562904 1724 ntBASIC5.11□□□□□ -1.59
RTL9Q8NET4 MTCO1P46-201ENST00000451639 1491 ntBASIC5.11□□□□□ -1.59
RTL9Q8NET4 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
RTL9Q8NET4 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RTL9Q8NET4 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.1□□□□□ -1.59
RTL9Q8NET4 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RTL9Q8NET4 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
RTL9Q8NET4 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
RTL9Q8NET4 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RTL9Q8NET4 SNORA60-201ENST00000362396 134 ntBASIC5.1□□□□□ -1.59
RTL9Q8NET4 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.1□□□□□ -1.59
RTL9Q8NET4 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.1□□□□□ -1.59
RTL9Q8NET4 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RTL9Q8NET4 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.1□□□□□ -1.59
RTL9Q8NET4 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.1□□□□□ -1.59
RTL9Q8NET4 RAD23BP3-201ENST00000454157 1152 ntBASIC5.1□□□□□ -1.59
RTL9Q8NET4 AC005008.1-201ENST00000456151 612 ntBASIC5.1□□□□□ -1.59
RTL9Q8NET4 AC091564.1-201ENST00000464563 479 ntBASIC5.1□□□□□ -1.59
RTL9Q8NET4 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.1□□□□□ -1.59
RTL9Q8NET4 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.1□□□□□ -1.59
RTL9Q8NET4 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC5.1□□□□□ -1.59
RTL9Q8NET4 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC5.1□□□□□ -1.59
RTL9Q8NET4 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.1□□□□□ -1.59
RTL9Q8NET4 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC5.1□□□□□ -1.59
RTL9Q8NET4 AC027176.2-201ENST00000559166 746 ntBASIC5.1□□□□□ -1.59
RTL9Q8NET4 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.1□□□□□ -1.59
RTL9Q8NET4 MKKS-203ENST00000609375 882 ntTSL 2 BASIC5.1□□□□□ -1.59
RTL9Q8NET4 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC5.1□□□□□ -1.59
RTL9Q8NET4 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
RTL9Q8NET4 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RTL9Q8NET4 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RTL9Q8NET4 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.09□□□□□ -1.59
RTL9Q8NET4 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RTL9Q8NET4 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RTL9Q8NET4 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.09□□□□□ -1.59
RTL9Q8NET4 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms