Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 OR1H1P-201ENST00000448731 937 ntBASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 AC233982.1-201ENST00000451247 436 ntBASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 RPL7P48-201ENST00000461513 746 ntBASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 AC013356.1-201ENST00000489027 564 ntBASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 AC124293.1-201ENST00000530034 493 ntBASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 MTCO1P40-201ENST00000574371 625 ntBASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 AC023575.1-201ENST00000580510 358 ntBASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 AL109653.1-201ENST00000603091 248 ntBASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 Z99497.2-201ENST00000603634 310 ntBASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 AC245389.1-201ENST00000605141 529 ntBASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 VN1R7P-201ENST00000619242 903 ntBASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 AC004943.3-201ENST00000624116 600 ntBASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 AC011944.2-201ENST00000624440 683 ntBASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 AC004158.1-201ENST00000564508 4319 ntBASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 AL359955.1-201ENST00000455242 3275 ntBASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 AC010266.2-201ENST00000564741 3255 ntBASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 NSRP1P1-201ENST00000444067 1693 ntBASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 AC239868.2-201ENST00000564237 4527 ntBASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.2□□□□□ -1.42
SMC1BQ8NDV3 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 AC114774.1-201ENST00000507410 1770 ntBASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 FAM133CP-201ENST00000332869 704 ntBASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 RN7SKP145-201ENST00000363291 303 ntBASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 SNORD1C-201ENST00000363315 78 ntBASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 SNORA66-201ENST00000384792 133 ntBASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 ERHP2-201ENST00000402323 299 ntBASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 RPL31-204ENST00000409038 817 ntTSL 2 BASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 AC092745.2-202ENST00000411880 369 ntBASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 MOB1AP1-201ENST00000430903 535 ntBASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 AC005002.1-201ENST00000447458 540 ntBASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 RN7SL319P-201ENST00000480656 221 ntBASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 AC093840.1-201ENST00000511599 336 ntBASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 NPM1P6-201ENST00000521088 871 ntBASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 MTND2P26-201ENST00000528255 1029 ntBASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 AC109446.2-201ENST00000567872 497 ntBASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 PIGPP4-201ENST00000584447 307 ntBASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 AC010487.1-201ENST00000594408 1172 ntBASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 AC006115.2-201ENST00000596823 202 ntBASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 MRPS35P3-201ENST00000603189 709 ntBASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 BX005019.1-201ENST00000561881 1810 ntBASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 AL513185.3-201ENST00000433335 1300 ntBASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 CARF-208ENST00000428585 2513 ntTSL 2 BASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
SMC1BQ8NDV3 AC017104.4-201ENST00000636283 1592 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms