Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VPS8Q8N3P4 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VPS8Q8N3P4 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
VPS8Q8N3P4 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC6.18□□□□□ -1.42
VPS8Q8N3P4 AC025750.1-201ENST00000399891 379 ntBASIC6.18□□□□□ -1.42
VPS8Q8N3P4 TCEA1P4-201ENST00000415066 844 ntBASIC6.18□□□□□ -1.42
VPS8Q8N3P4 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC6.18□□□□□ -1.42
VPS8Q8N3P4 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC6.18□□□□□ -1.42
VPS8Q8N3P4 OR9M1P-201ENST00000459641 921 ntBASIC6.18□□□□□ -1.42
VPS8Q8N3P4 PPM1AP1-201ENST00000502740 1135 ntBASIC6.18□□□□□ -1.42
VPS8Q8N3P4 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC6.18□□□□□ -1.42
VPS8Q8N3P4 AL606490.9-201ENST00000603331 271 ntBASIC6.18□□□□□ -1.42
VPS8Q8N3P4 AC039056.2-201ENST00000622261 511 ntBASIC6.18□□□□□ -1.42
VPS8Q8N3P4 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
VPS8Q8N3P4 Z82217.1-201ENST00000625157 8149 ntBASIC6.18□□□□□ -1.42
VPS8Q8N3P4 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
VPS8Q8N3P4 AL022322.2-201ENST00000624072 20397 ntBASIC6.17□□□□□ -1.42
VPS8Q8N3P4 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
VPS8Q8N3P4 RNA5SP124-201ENST00000362739 110 ntBASIC6.17□□□□□ -1.42
VPS8Q8N3P4 RNU1-64P-201ENST00000365443 163 ntBASIC6.17□□□□□ -1.42
VPS8Q8N3P4 CGA-201ENST00000369582 729 ntTSL 5 BASIC6.17□□□□□ -1.42
VPS8Q8N3P4 U8.11-201ENST00000384699 133 ntBASIC6.17□□□□□ -1.42
VPS8Q8N3P4 U8.12-201ENST00000384701 133 ntBASIC6.17□□□□□ -1.42
VPS8Q8N3P4 MIR1251-201ENST00000408552 70 ntBASIC6.17□□□□□ -1.42
VPS8Q8N3P4 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC6.17□□□□□ -1.42
VPS8Q8N3P4 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC6.17□□□□□ -1.42
VPS8Q8N3P4 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC6.17□□□□□ -1.42
VPS8Q8N3P4 U8.18-201ENST00000459285 133 ntBASIC6.17□□□□□ -1.42
VPS8Q8N3P4 RN7SL542P-201ENST00000467147 294 ntBASIC6.17□□□□□ -1.42
VPS8Q8N3P4 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC6.17□□□□□ -1.42
VPS8Q8N3P4 AC091959.2-201ENST00000477363 321 ntBASIC6.17□□□□□ -1.42
VPS8Q8N3P4 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC6.17□□□□□ -1.42
VPS8Q8N3P4 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC6.17□□□□□ -1.42
VPS8Q8N3P4 NPM1P47-201ENST00000560843 856 ntBASIC6.17□□□□□ -1.42
VPS8Q8N3P4 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC6.17□□□□□ -1.42
VPS8Q8N3P4 AC015726.1-201ENST00000602353 681 ntBASIC6.17□□□□□ -1.42
VPS8Q8N3P4 AL354798.1-201ENST00000622505 329 ntBASIC6.17□□□□□ -1.42
VPS8Q8N3P4 SLC2A3P1-201ENST00000519666 1451 ntBASIC6.17□□□□□ -1.42
VPS8Q8N3P4 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
VPS8Q8N3P4 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.17□□□□□ -1.42
VPS8Q8N3P4 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
VPS8Q8N3P4 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
VPS8Q8N3P4 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
VPS8Q8N3P4 AL050305.1-201ENST00000399993 1230 ntBASIC6.16□□□□□ -1.42
VPS8Q8N3P4 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC6.16□□□□□ -1.42
VPS8Q8N3P4 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.16□□□□□ -1.42
VPS8Q8N3P4 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC6.16□□□□□ -1.42
VPS8Q8N3P4 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC6.16□□□□□ -1.42
VPS8Q8N3P4 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC6.16□□□□□ -1.42
VPS8Q8N3P4 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC6.16□□□□□ -1.42
VPS8Q8N3P4 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC6.16□□□□□ -1.42
VPS8Q8N3P4 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
VPS8Q8N3P4 AC034105.4-201ENST00000568304 277 ntBASIC6.16□□□□□ -1.42
VPS8Q8N3P4 AL645927.2-201ENST00000618350 349 ntBASIC6.16□□□□□ -1.42
VPS8Q8N3P4 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC6.16□□□□□ -1.42
VPS8Q8N3P4 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
VPS8Q8N3P4 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
VPS8Q8N3P4 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
VPS8Q8N3P4 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
VPS8Q8N3P4 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
VPS8Q8N3P4 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC6.16□□□□□ -1.42
VPS8Q8N3P4 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
VPS8Q8N3P4 CARF-208ENST00000428585 2513 ntTSL 2 BASIC6.16□□□□□ -1.42
VPS8Q8N3P4 AC139713.2-215ENST00000641428 5037 ntBASIC6.16□□□□□ -1.42
VPS8Q8N3P4 SPATA31D2P-201ENST00000429999 4388 ntBASIC6.16□□□□□ -1.42
VPS8Q8N3P4 POMP-202ENST00000460403 1428 ntTSL 3 BASIC6.16□□□□□ -1.42
VPS8Q8N3P4 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
VPS8Q8N3P4 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC6.16□□□□□ -1.42
VPS8Q8N3P4 ELOCP8-201ENST00000439309 332 ntBASIC6.16□□□□□ -1.42
VPS8Q8N3P4 HMGB1P37-201ENST00000439613 609 ntBASIC6.16□□□□□ -1.42
VPS8Q8N3P4 ELOCP15-201ENST00000442090 332 ntBASIC6.16□□□□□ -1.42
VPS8Q8N3P4 AC026782.2-201ENST00000510845 636 ntBASIC6.16□□□□□ -1.42
VPS8Q8N3P4 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC6.16□□□□□ -1.42
VPS8Q8N3P4 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
VPS8Q8N3P4 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC6.16□□□□□ -1.42
VPS8Q8N3P4 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC6.16□□□□□ -1.42
VPS8Q8N3P4 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC6.16□□□□□ -1.42
VPS8Q8N3P4 GNRHR2P1-201ENST00000555315 631 ntBASIC6.16□□□□□ -1.42
VPS8Q8N3P4 HSPE1P5-201ENST00000561489 272 ntBASIC6.16□□□□□ -1.42
VPS8Q8N3P4 AC012603.1-201ENST00000606424 528 ntBASIC6.16□□□□□ -1.42
VPS8Q8N3P4 AC090912.3-201ENST00000609775 533 ntBASIC6.16□□□□□ -1.42
VPS8Q8N3P4 PCA3_2.1-201ENST00000612507 409 ntBASIC6.16□□□□□ -1.42
VPS8Q8N3P4 AC138627.1-204ENST00000641894 765 ntBASIC6.16□□□□□ -1.42
VPS8Q8N3P4 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.42
VPS8Q8N3P4 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
VPS8Q8N3P4 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
VPS8Q8N3P4 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.42
VPS8Q8N3P4 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
VPS8Q8N3P4 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC6.15□□□□□ -1.42
VPS8Q8N3P4 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
VPS8Q8N3P4 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC6.15□□□□□ -1.43
VPS8Q8N3P4 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC6.15□□□□□ -1.43
VPS8Q8N3P4 TPTE2P3-201ENST00000441562 1189 ntBASIC6.15□□□□□ -1.43
VPS8Q8N3P4 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC6.15□□□□□ -1.43
VPS8Q8N3P4 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC6.15□□□□□ -1.43
VPS8Q8N3P4 CYCSP53-201ENST00000455540 265 ntBASIC6.15□□□□□ -1.43
VPS8Q8N3P4 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC6.15□□□□□ -1.43
VPS8Q8N3P4 SEPT14P1-201ENST00000458703 648 ntBASIC6.15□□□□□ -1.43
VPS8Q8N3P4 RPS20P21-201ENST00000466859 343 ntBASIC6.15□□□□□ -1.43
VPS8Q8N3P4 PPIAP15-201ENST00000479662 484 ntBASIC6.15□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms