Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC246680.2-201ENST00000422106 389 ntBASIC5.33□□□□□ -1.56
HERC6Q8IVU3 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.33□□□□□ -1.56
HERC6Q8IVU3 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.33□□□□□ -1.56
HERC6Q8IVU3 RPL12P28-201ENST00000430852 489 ntBASIC5.33□□□□□ -1.56
HERC6Q8IVU3 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.33□□□□□ -1.56
HERC6Q8IVU3 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HERC6Q8IVU3 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.33□□□□□ -1.56
HERC6Q8IVU3 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.33□□□□□ -1.56
HERC6Q8IVU3 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
HERC6Q8IVU3 TCEA1P3-201ENST00000443005 880 ntBASIC5.33□□□□□ -1.56
HERC6Q8IVU3 AC068135.1-201ENST00000446164 246 ntBASIC5.33□□□□□ -1.56
HERC6Q8IVU3 OR51B8P-201ENST00000449892 769 ntBASIC5.33□□□□□ -1.56
HERC6Q8IVU3 TPMTP4-201ENST00000450749 678 ntBASIC5.33□□□□□ -1.56
HERC6Q8IVU3 OR52E3P-201ENST00000452083 936 ntBASIC5.33□□□□□ -1.56
HERC6Q8IVU3 RPL23AP37-201ENST00000479658 549 ntBASIC5.33□□□□□ -1.56
HERC6Q8IVU3 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.33□□□□□ -1.56
HERC6Q8IVU3 AC010627.1-201ENST00000503819 1294 ntBASIC5.33□□□□□ -1.56
HERC6Q8IVU3 SLC25A15P5-201ENST00000508033 253 ntBASIC5.33□□□□□ -1.56
HERC6Q8IVU3 AC093824.1-201ENST00000508796 343 ntBASIC5.33□□□□□ -1.56
HERC6Q8IVU3 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5.33□□□□□ -1.56
HERC6Q8IVU3 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.33□□□□□ -1.56
HERC6Q8IVU3 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.33□□□□□ -1.56
HERC6Q8IVU3 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HERC6Q8IVU3 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.33□□□□□ -1.56
HERC6Q8IVU3 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.33□□□□□ -1.56
HERC6Q8IVU3 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.33□□□□□ -1.56
HERC6Q8IVU3 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.33□□□□□ -1.56
HERC6Q8IVU3 RN7SL290P-201ENST00000578661 300 ntBASIC5.33□□□□□ -1.56
HERC6Q8IVU3 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.33□□□□□ -1.56
HERC6Q8IVU3 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.33□□□□□ -1.56
HERC6Q8IVU3 RPL12P25-202ENST00000598100 674 ntBASIC5.33□□□□□ -1.56
HERC6Q8IVU3 EIF1P6-201ENST00000600054 334 ntBASIC5.33□□□□□ -1.56
HERC6Q8IVU3 AL109618.2-201ENST00000605527 211 ntBASIC5.33□□□□□ -1.56
HERC6Q8IVU3 AL121890.2-201ENST00000617644 465 ntBASIC5.33□□□□□ -1.56
HERC6Q8IVU3 AP003485.1-201ENST00000625093 753 ntBASIC5.33□□□□□ -1.56
HERC6Q8IVU3 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
HERC6Q8IVU3 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
HERC6Q8IVU3 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HERC6Q8IVU3 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
HERC6Q8IVU3 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HERC6Q8IVU3 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.32□□□□□ -1.56
HERC6Q8IVU3 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
HERC6Q8IVU3 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HERC6Q8IVU3 AC108751.5-201ENST00000492880 1336 ntBASIC5.32□□□□□ -1.56
HERC6Q8IVU3 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
HERC6Q8IVU3 RNU6-543P-201ENST00000362576 108 ntBASIC5.32□□□□□ -1.56
HERC6Q8IVU3 RNU6-1339P-201ENST00000363574 91 ntBASIC5.32□□□□□ -1.56
HERC6Q8IVU3 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HERC6Q8IVU3 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HERC6Q8IVU3 SNORD65C-201ENST00000390962 71 ntBASIC5.32□□□□□ -1.56
HERC6Q8IVU3 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.32□□□□□ -1.56
HERC6Q8IVU3 AC114755.2-201ENST00000413520 361 ntBASIC5.32□□□□□ -1.56
HERC6Q8IVU3 AC009302.1-201ENST00000417147 390 ntBASIC5.32□□□□□ -1.56
HERC6Q8IVU3 AC106883.1-201ENST00000418805 562 ntBASIC5.32□□□□□ -1.56
HERC6Q8IVU3 SFR1P2-201ENST00000421841 730 ntBASIC5.32□□□□□ -1.56
HERC6Q8IVU3 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.32□□□□□ -1.56
HERC6Q8IVU3 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.32□□□□□ -1.56
HERC6Q8IVU3 OR5AW1P-201ENST00000426334 1006 ntBASIC5.32□□□□□ -1.56
HERC6Q8IVU3 AC009238.2-201ENST00000431026 355 ntBASIC5.32□□□□□ -1.56
HERC6Q8IVU3 AC016831.4-201ENST00000438302 307 ntBASIC5.32□□□□□ -1.56
HERC6Q8IVU3 AC092013.1-201ENST00000438795 332 ntBASIC5.32□□□□□ -1.56
HERC6Q8IVU3 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.32□□□□□ -1.56
HERC6Q8IVU3 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
HERC6Q8IVU3 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.32□□□□□ -1.56
HERC6Q8IVU3 AC002553.2-201ENST00000453217 340 ntBASIC5.32□□□□□ -1.56
HERC6Q8IVU3 RPS5P7-201ENST00000456664 608 ntBASIC5.32□□□□□ -1.56
HERC6Q8IVU3 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC5.32□□□□□ -1.56
HERC6Q8IVU3 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC5.32□□□□□ -1.56
HERC6Q8IVU3 MTND2P28-201ENST00000457540 1044 ntBASIC5.32□□□□□ -1.56
HERC6Q8IVU3 RPL7AP28-201ENST00000464513 571 ntBASIC5.32□□□□□ -1.56
HERC6Q8IVU3 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
HERC6Q8IVU3 AC023050.1-201ENST00000498198 304 ntBASIC5.32□□□□□ -1.56
HERC6Q8IVU3 SCARNA22-201ENST00000503991 125 ntBASIC5.32□□□□□ -1.56
HERC6Q8IVU3 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.32□□□□□ -1.56
HERC6Q8IVU3 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.32□□□□□ -1.56
HERC6Q8IVU3 ENPP7P11-201ENST00000505915 627 ntBASIC5.32□□□□□ -1.56
HERC6Q8IVU3 RNU6-513P-201ENST00000516104 104 ntBASIC5.32□□□□□ -1.56
HERC6Q8IVU3 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.32□□□□□ -1.56
HERC6Q8IVU3 AC021451.1-201ENST00000523498 1129 ntBASIC5.32□□□□□ -1.56
HERC6Q8IVU3 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.32□□□□□ -1.56
HERC6Q8IVU3 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.32□□□□□ -1.56
HERC6Q8IVU3 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HERC6Q8IVU3 AL121594.4-201ENST00000556211 1196 ntBASIC5.32□□□□□ -1.56
HERC6Q8IVU3 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.32□□□□□ -1.56
HERC6Q8IVU3 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.32□□□□□ -1.56
HERC6Q8IVU3 MIR3160-1-201ENST00000577972 85 ntBASIC5.32□□□□□ -1.56
HERC6Q8IVU3 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
HERC6Q8IVU3 RN7SL339P-201ENST00000580597 296 ntBASIC5.32□□□□□ -1.56
HERC6Q8IVU3 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5.32□□□□□ -1.56
HERC6Q8IVU3 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.32□□□□□ -1.56
HERC6Q8IVU3 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
HERC6Q8IVU3 AL606834.3-201ENST00000602615 496 ntBASIC5.32□□□□□ -1.56
HERC6Q8IVU3 PSMA6P4-201ENST00000603247 718 ntBASIC5.32□□□□□ -1.56
HERC6Q8IVU3 AC023762.1-201ENST00000603280 584 ntBASIC5.32□□□□□ -1.56
HERC6Q8IVU3 AC010857.1-201ENST00000606398 594 ntBASIC5.32□□□□□ -1.56
HERC6Q8IVU3 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC5.32□□□□□ -1.56
HERC6Q8IVU3 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC5.32□□□□□ -1.56
HERC6Q8IVU3 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
HERC6Q8IVU3 AC112198.2-201ENST00000426589 6996 ntBASIC5.32□□□□□ -1.56
HERC6Q8IVU3 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms