Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 AC099654.2-201ENST00000433031 1980 ntBASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 UBBP2-201ENST00000376781 231 ntBASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 RNU6-636P-201ENST00000384598 107 ntBASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 SFR1P1-201ENST00000403720 688 ntBASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 ARL4AP5-201ENST00000404372 599 ntBASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 AL138880.1-201ENST00000405824 642 ntBASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 CHEK2P3-201ENST00000416118 248 ntBASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 AC008173.1-201ENST00000418901 264 ntBASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 MFSD13B-201ENST00000420133 1290 ntBASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 GNG5P5-201ENST00000420444 220 ntBASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 AL365396.1-201ENST00000430854 671 ntBASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 AC092685.1-201ENST00000447960 1243 ntBASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 MTND1P27-201ENST00000451117 902 ntBASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 ATG12P2-201ENST00000456830 416 ntBASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 AC110749.1-201ENST00000462007 357 ntBASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 MTND2P14-201ENST00000482139 351 ntBASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 RN7SL808P-201ENST00000496066 299 ntBASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 SUMO2P4-201ENST00000504193 276 ntBASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 OR5BM1P-201ENST00000512021 366 ntBASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 AC090819.1-201ENST00000523800 1111 ntBASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 AC087897.1-201ENST00000550134 156 ntBASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 AC069366.1-201ENST00000583159 838 ntBASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 AC020910.3-201ENST00000603701 874 ntBASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 AC121247.2-201ENST00000604776 136 ntBASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 AL133507.1-201ENST00000605269 557 ntBASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 AC007497.1-201ENST00000610421 561 ntBASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 MIR8069-1-201ENST00000616627 86 ntBASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 AC123767.1-202ENST00000620407 817 ntBASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 MIR8069-2-201ENST00000621412 86 ntBASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 AC012414.7-202ENST00000622705 1090 ntBASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 AC015804.1-201ENST00000622935 435 ntBASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 AP002799.1-201ENST00000623552 423 ntBASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 AL049536.1-201ENST00000625043 744 ntBASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 DHX9P1-201ENST00000436565 3076 ntBASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 HSPA8P18-201ENST00000439846 1928 ntBASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ZNF549Q6P9A3 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 MAPK10-320ENST00000641462 6696 ntBASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 RN7SKP104-201ENST00000362605 328 ntBASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 RNA5SP305-201ENST00000362665 119 ntBASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 RN7SKP149-201ENST00000363008 344 ntBASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 RNA5SP123-201ENST00000363244 119 ntBASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 SNORD113-6-201ENST00000363345 75 ntBASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 SNORD116-9-201ENST00000384000 95 ntBASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 SNORD116-3-201ENST00000384287 95 ntBASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 Y_RNA.472-201ENST00000384322 102 ntBASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 SNORD116-7-201ENST00000384404 95 ntBASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 SNORD116-5-201ENST00000384462 95 ntBASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 HMGB3P7-201ENST00000400214 611 ntBASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 AL592291.1-201ENST00000403830 352 ntBASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 AL008987.1-201ENST00000415528 237 ntBASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 AC010153.1-201ENST00000432862 727 ntBASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 MUPP-201ENST00000438111 566 ntBASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 MTCO2P7-201ENST00000446518 666 ntBASIC4.78□□□□□ -1.64
ZNF549Q6P9A3 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms