Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.08□□□□□ -1.6
SNX30Q5VWJ9 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
SNX30Q5VWJ9 AC073358.1-201ENST00000505671 684 ntBASIC5.08□□□□□ -1.6
SNX30Q5VWJ9 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.08□□□□□ -1.6
SNX30Q5VWJ9 COX6B1P6-201ENST00000522347 255 ntBASIC5.08□□□□□ -1.6
SNX30Q5VWJ9 AC010306.1-201ENST00000523223 1117 ntBASIC5.08□□□□□ -1.6
SNX30Q5VWJ9 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.08□□□□□ -1.6
SNX30Q5VWJ9 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.08□□□□□ -1.6
SNX30Q5VWJ9 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SNX30Q5VWJ9 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.08□□□□□ -1.6
SNX30Q5VWJ9 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.08□□□□□ -1.6
SNX30Q5VWJ9 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.08□□□□□ -1.6
SNX30Q5VWJ9 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC5.08□□□□□ -1.6
SNX30Q5VWJ9 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.08□□□□□ -1.6
SNX30Q5VWJ9 AC090751.1-201ENST00000566966 267 ntBASIC5.08□□□□□ -1.6
SNX30Q5VWJ9 EIF1P6-201ENST00000600054 334 ntBASIC5.08□□□□□ -1.6
SNX30Q5VWJ9 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SNX30Q5VWJ9 AL121932.1-201ENST00000605542 214 ntBASIC5.08□□□□□ -1.6
SNX30Q5VWJ9 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.08□□□□□ -1.6
SNX30Q5VWJ9 MIR6820-201ENST00000611508 62 ntBASIC5.08□□□□□ -1.6
SNX30Q5VWJ9 AL161616.1-201ENST00000611867 286 ntBASIC5.08□□□□□ -1.6
SNX30Q5VWJ9 AC016717.3-201ENST00000624730 554 ntBASIC5.08□□□□□ -1.6
SNX30Q5VWJ9 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.08□□□□□ -1.6
SNX30Q5VWJ9 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SNX30Q5VWJ9 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.08□□□□□ -1.6
SNX30Q5VWJ9 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SNX30Q5VWJ9 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SNX30Q5VWJ9 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SNX30Q5VWJ9 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.08□□□□□ -1.6
SNX30Q5VWJ9 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SNX30Q5VWJ9 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.08□□□□□ -1.6
SNX30Q5VWJ9 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 RNU6-543P-201ENST00000362576 108 ntBASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 AC234772.1-201ENST00000377927 937 ntBASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 U3.30-201ENST00000391308 210 ntBASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 RPL22P22-201ENST00000395439 379 ntBASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 STAT4-203ENST00000409995 709 ntTSL 5 BASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 AL024507.1-201ENST00000412741 274 ntBASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 AC013429.2-201ENST00000418798 781 ntBASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 AL358176.3-201ENST00000420757 454 ntBASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 AC115285.1-201ENST00000424879 736 ntBASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 AC005154.2-201ENST00000438110 379 ntBASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 AC073052.1-201ENST00000440417 714 ntBASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 RNF2P1-201ENST00000442955 1010 ntBASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 HSFY3P-201ENST00000444242 1191 ntBASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 AC044797.1-201ENST00000445744 679 ntBASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 AC239809.1-201ENST00000450470 217 ntBASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 AC006511.1-201ENST00000470614 315 ntBASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 RPL23AP71-201ENST00000470966 469 ntBASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 HPRT1P2-201ENST00000505250 544 ntBASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 ENPP7P9-201ENST00000514456 627 ntBASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 RN7SKP276-201ENST00000516242 268 ntBASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 AP001880.2-201ENST00000538233 448 ntBASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 MTND4LP24-201ENST00000572277 291 ntBASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 AC022726.1-201ENST00000587475 207 ntBASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 AC115085.1-201ENST00000588924 229 ntBASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 AL136295.6-201ENST00000610486 658 ntBASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 AC100847.1-201ENST00000611316 481 ntBASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 AC123768.4-201ENST00000616244 701 ntBASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 AL049777.1-201ENST00000622740 518 ntBASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 SALL4P2-201ENST00000423288 2910 ntBASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 ZNF849P-201ENST00000594711 1566 ntBASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.07□□□□□ -1.6
SNX30Q5VWJ9 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.06□□□□□ -1.6
SNX30Q5VWJ9 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SNX30Q5VWJ9 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SNX30Q5VWJ9 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
SNX30Q5VWJ9 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.06□□□□□ -1.6
SNX30Q5VWJ9 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.06□□□□□ -1.6
SNX30Q5VWJ9 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SNX30Q5VWJ9 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
SNX30Q5VWJ9 RNA5SP443-201ENST00000363083 132 ntBASIC5.06□□□□□ -1.6
SNX30Q5VWJ9 RNU6-1339P-201ENST00000363574 91 ntBASIC5.06□□□□□ -1.6
SNX30Q5VWJ9 RNU6-146P-201ENST00000384602 108 ntBASIC5.06□□□□□ -1.6
SNX30Q5VWJ9 MIR192-201ENST00000384915 110 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms