Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC106707.2-201ENST00000484182 374 ntBASIC2.65□□□□□ -1.99
VPS13DQ5THJ4 AC005726.1-201ENST00000494679 427 ntBASIC2.65□□□□□ -1.99
VPS13DQ5THJ4 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC2.65□□□□□ -1.99
VPS13DQ5THJ4 AC063950.1-201ENST00000552036 308 ntBASIC2.65□□□□□ -1.99
VPS13DQ5THJ4 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC2.65□□□□□ -1.99
VPS13DQ5THJ4 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
VPS13DQ5THJ4 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
VPS13DQ5THJ4 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
VPS13DQ5THJ4 MTND5P1-201ENST00000445440 1375 ntBASIC2.65□□□□□ -1.99
VPS13DQ5THJ4 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
VPS13DQ5THJ4 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
VPS13DQ5THJ4 AC023632.6-201ENST00000624338 2177 ntBASIC2.64□□□□□ -1.99
VPS13DQ5THJ4 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
VPS13DQ5THJ4 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
VPS13DQ5THJ4 AL031121.1-201ENST00000406553 254 ntBASIC2.64□□□□□ -1.99
VPS13DQ5THJ4 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC2.64□□□□□ -1.99
VPS13DQ5THJ4 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC2.64□□□□□ -1.99
VPS13DQ5THJ4 SRGNP1-201ENST00000603392 451 ntBASIC2.64□□□□□ -1.99
VPS13DQ5THJ4 AP001002.2-201ENST00000625137 386 ntBASIC2.64□□□□□ -1.99
VPS13DQ5THJ4 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.64□□□□□ -1.99
VPS13DQ5THJ4 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
VPS13DQ5THJ4 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
VPS13DQ5THJ4 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC2.64□□□□□ -1.99
VPS13DQ5THJ4 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
VPS13DQ5THJ4 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
VPS13DQ5THJ4 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
VPS13DQ5THJ4 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC2.64□□□□□ -1.99
VPS13DQ5THJ4 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC2.64□□□□□ -1.99
VPS13DQ5THJ4 AC006511.1-201ENST00000470614 315 ntBASIC2.64□□□□□ -1.99
VPS13DQ5THJ4 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC2.64□□□□□ -1.99
VPS13DQ5THJ4 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
VPS13DQ5THJ4 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
VPS13DQ5THJ4 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
VPS13DQ5THJ4 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC2.64□□□□□ -1.99
VPS13DQ5THJ4 MIR195-201ENST00000385194 87 ntBASIC2.64□□□□□ -1.99
VPS13DQ5THJ4 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.64□□□□□ -1.99
VPS13DQ5THJ4 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC2.64□□□□□ -1.99
VPS13DQ5THJ4 AC073387.1-201ENST00000453261 709 ntBASIC2.64□□□□□ -1.99
VPS13DQ5THJ4 CREM-238ENST00000488741 651 ntTSL 2 BASIC2.64□□□□□ -1.99
VPS13DQ5THJ4 AGGF1P3-201ENST00000493675 1213 ntBASIC2.64□□□□□ -1.99
VPS13DQ5THJ4 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC2.64□□□□□ -1.99
VPS13DQ5THJ4 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC2.64□□□□□ -1.99
VPS13DQ5THJ4 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC2.64□□□□□ -1.99
VPS13DQ5THJ4 AC133552.5-201ENST00000604266 540 ntBASIC2.64□□□□□ -1.99
VPS13DQ5THJ4 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
VPS13DQ5THJ4 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
VPS13DQ5THJ4 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC2.64□□□□□ -1.99
VPS13DQ5THJ4 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.64□□□□□ -1.99
VPS13DQ5THJ4 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC2.63□□□□□ -1.99
VPS13DQ5THJ4 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC2.63□□□□□ -1.99
VPS13DQ5THJ4 AC006517.1-201ENST00000480485 328 ntBASIC2.63□□□□□ -1.99
VPS13DQ5THJ4 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC2.63□□□□□ -1.99
VPS13DQ5THJ4 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC2.63□□□□□ -1.99
VPS13DQ5THJ4 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC2.63□□□□□ -1.99
VPS13DQ5THJ4 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
VPS13DQ5THJ4 EEF1A1P42-201ENST00000613436 1331 ntBASIC2.63□□□□□ -1.99
VPS13DQ5THJ4 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
VPS13DQ5THJ4 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
VPS13DQ5THJ4 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
VPS13DQ5THJ4 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
VPS13DQ5THJ4 AC083899.2-201ENST00000423285 1376 ntBASIC2.63□□□□□ -1.99
VPS13DQ5THJ4 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
VPS13DQ5THJ4 SNORD17-201ENST00000390930 237 ntBASIC2.63□□□□□ -1.99
VPS13DQ5THJ4 RPS7P15-201ENST00000415804 584 ntBASIC2.63□□□□□ -1.99
VPS13DQ5THJ4 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC2.63□□□□□ -1.99
VPS13DQ5THJ4 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC2.63□□□□□ -1.99
VPS13DQ5THJ4 AC022146.1-201ENST00000595307 847 ntBASIC2.63□□□□□ -1.99
VPS13DQ5THJ4 MTCO1P12-201ENST00000414273 1543 ntBASIC2.63□□□□□ -1.99
VPS13DQ5THJ4 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
VPS13DQ5THJ4 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
VPS13DQ5THJ4 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
VPS13DQ5THJ4 VPS35P1-201ENST00000563400 1518 ntBASIC2.63□□□□□ -1.99
VPS13DQ5THJ4 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
VPS13DQ5THJ4 MTND2P15-201ENST00000418575 892 ntBASIC2.63□□□□□ -1.99
VPS13DQ5THJ4 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC2.63□□□□□ -1.99
VPS13DQ5THJ4 HMGB3P16-201ENST00000508037 287 ntBASIC2.63□□□□□ -1.99
VPS13DQ5THJ4 AC138938.1-201ENST00000515431 782 ntBASIC2.63□□□□□ -1.99
VPS13DQ5THJ4 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.63□□□□□ -1.99
VPS13DQ5THJ4 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC2.63□□□□□ -1.99
VPS13DQ5THJ4 AC022655.2-201ENST00000577280 318 ntBASIC2.63□□□□□ -1.99
VPS13DQ5THJ4 SNX6P1-201ENST00000601728 1224 ntBASIC2.63□□□□□ -1.99
VPS13DQ5THJ4 MIR7112-201ENST00000616126 65 ntBASIC2.63□□□□□ -1.99
VPS13DQ5THJ4 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC2.63□□□□□ -1.99
VPS13DQ5THJ4 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC2.63□□□□□ -1.99
VPS13DQ5THJ4 LYST-202ENST00000389794 12985 ntTSL 5 BASIC2.63□□□□□ -1.99
VPS13DQ5THJ4 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
VPS13DQ5THJ4 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC2.63□□□□□ -1.99
VPS13DQ5THJ4 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.63□□□□□ -1.99
VPS13DQ5THJ4 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
VPS13DQ5THJ4 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
VPS13DQ5THJ4 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
VPS13DQ5THJ4 ZNF736P2Y-201ENST00000416040 1279 ntBASIC2.63□□□□□ -1.99
VPS13DQ5THJ4 RPS26P2-201ENST00000440331 348 ntBASIC2.63□□□□□ -1.99
VPS13DQ5THJ4 AC018635.1-201ENST00000468292 1030 ntBASIC2.63□□□□□ -1.99
VPS13DQ5THJ4 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.63□□□□□ -1.99
VPS13DQ5THJ4 AC115621.1-201ENST00000604653 858 ntBASIC2.63□□□□□ -1.99
VPS13DQ5THJ4 AL138721.1-201ENST00000616756 179 ntBASIC2.63□□□□□ -1.99
VPS13DQ5THJ4 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.63□□□□□ -1.99
VPS13DQ5THJ4 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
VPS13DQ5THJ4 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms